Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os11g0157100_circ_g.1 |
ID in PlantcircBase | osa_circ_008514 |
Alias | Os11circ00634 |
Organism | Oryza sativa |
Position | chr11: 2734307-2735084 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | u-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Os11g0157100 |
Parent gene annotation |
Similar to Cyclin T1 (Fragment). (Os11t0157100-01);Similar to cD NA clone:J013091M21, full insert sequence. (Os11t0157100-02) |
Parent gene strand | + |
Alternative splicing | Os11g0157100_circ_g.2 |
Support reads | 2 |
Tissues | leaf |
Exon boundary | Yes-No |
Splicing signals | GT-AG |
Number of exons covered | Os11t0157100-02:2 Os11t0157100-01:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.481930099 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |