Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d006373_circ_g.1 |
| ID in PlantcircBase | zma_circ_001182 |
| Alias | circ508 |
| Organism | Zea mays |
| Position | chr2: 206000319-206005153 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | u-circRNA |
| Identification method | CIRI |
| Parent gene | Zm00001d006373 |
| Parent gene annotation |
E3 ubiquitin protein ligase RIN2 |
| Parent gene strand | - |
| Alternative splicing | NA |
| Support reads | 10 |
| Tissues | seedling leaves |
| Exon boundary | No-Yes |
| Splicing signals | CT-TA |
| Number of exons covered | Zm00001d006373_T017:5 Zm00001d006373_T014:3 Zm00001d006373_T004:4 Zm00001d006373_T003:3 Zm00001d006373_T013:5 Zm00001d006373_T008:5 Zm00001d006373_T011:4 Zm00001d006373_T001:5 Zm00001d006373_T012:3 Zm00001d006373_T010:4 Zm00001d006373_T018:5 Zm00001d006373_T005:4 Zm00001d006373_T020:4 Zm00001d006373_T007:5 Zm00001d006373_T009:5 Zm00001d006373_T006:5 Zm00001d006373_T019:5 Zm00001d006373_T002:6 Zm00001d006373_T016:5 Zm00001d006373_T015:5 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.020113182 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Chen et al., 2017b |