Detail information of BGIOSGA033133_circ_g.3


General Information
CircRNA Name BGIOSGA033133_circ_g.3
ID in PlantcircBase osi_circ_008519
Alias Chr10:20067257_20070130(ZS97RS2), Chr10:19613687_19616561(MH63RS2)
Organism Oryza sativa ssp. indica
Position chr10: 16654185-16657058  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   ie-circRNA
Identification method CIRI2, CIRCexplorer2, CIRCexplorer2
Parent gene BGIOSGA033133
Parent gene annotation NA
Parent gene strand +
Alternative splicing BGIOSGA033133_circ_g.1 BGIOSGA033133_circ_g.2 BGIOSGA033133_circ_g.4
Support reads NA
Tissues root, leaf, panicle
Exon boundary   No-No
Splicing signals   GT-CA
Number of exons covered BGIOSGA033133-TA:6
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   TCTGCCAGAATCTCCGCATCTAATCTTGCTTCGCTTCCTTTGGTCTATACGGCACTTTCTTCGT
TGAACTCTGACCAATTTTTGGAGGCAGCTGTAAATGggtagctgacagcttacttcatgatgaa
agtagtaatatggagactcaaatcttctgctctcaaaccctcagaagcaaggtaaataaattga
tatgtatc
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GGTAGCTGACAGCTTACTTCATGATGAAAGTAGTAATATGGAGACTCAAATCTTCTGCTCTCAA
ACCCTCAGAAGCAAGGTAAATAAATTGATATGTATCACTGCTTCTCTTCTAATTATTTAAAAAA
CTCTGAAATTGGTCTAATTCTTCCTGTTGTCTTTTAAATTATCCCAATACCAGGTACAAAGGGA
CTTTGAAGAATTACCTTCAGAAGCTTTCCGTCCGTTACAAGATTCTCTATATGTAAGCACCAGT
TTTTGAAGTTCTTGCTTTTCTTTTCTTATTAGCATATTATAATCAGTTCAACTAAATGTTGTAT
CAAGTAGAATCAGTCTTCTATTTGGCTGCCATTTCTGTTTGATAATAGGCGTTATTTCACTTGC
TCAAAATAAAATAAAACCAATTTTTCAAAGTTATGTCATGTCATGTTCAGTGATGGATTTGTTT
ACCTTTAGTAGTAAGATTTGGATAATCTTGTGAAGATCTTGTTTTGTTTCATTTAACTGTGATG
TATCTGCAGGCATTGCTGAAAAAATTTAGTAAAGGACCACAAAAAGTTAGAACACAGGTAATCT
ATACTACCTCCATTCCTTTGTACTTGTCATTTAGGATATTGATACAATCACCAGTACACAATTT
TGACTTATACCTTTTGTAATTATATACTCACAGCATACTAAAAATATAATCATATTAGTAGCAA
AAAAAAATATTAGTAGCAAAAAAATCTTAATACGGTCGTGTATATTAGTAGCAAAAAAAAATAT
ATCAAAGTTTGATTGCACACATTCTAAGACCACATTTATTTGAGTATATAGCTTGTAATTAAGC
AATCAATTTTGTATTTCACAGTTATAATGGCAAACTACCTTTTGTGCCATCTTCAGATTTGCAT
TGCAATGGCTGCTCTTGCGGTGCATGTACCTGTAGAGGACTGGGGAGGTGGTGGGATTGTGAAT
TGGCTAAGTGATGAAATGAACTCTCAACAAGACTTTATCCCAAGCTTCCTTGAGCTGCTAACTG
TTTTGCCACAGGTACATACATGTCTAGCCTCATATGGACTCCTATCATATACCCTATTGTTTCC
ATGTCGCTGAGTTCATCCTATCTTTATAATCCTATATAGGAGTGAACAGTTTTACTTCAAGTCT
GTCCTGTAGTTTGGTTAACTCATATAGAAGTACCATGAATCCTTCTGACACTGAAGGATTTGTG
TTAAAGAAAGCTGAAATATGATCTCAATGCCTTGTAAAATGTGTGCTATTATATTTTGTGCACA
GGAAGCACCAAAGTAGTACCATTTTTGTGGTTATTGTCTTGAGTAAAAGAAAATGAGTTGAAGT
AAAACAATTCATTTTTTTATTGTCCTTTTGCCATTTCCAAAAAAAAGAGAGATATTTTAGTAAT
AGTAGATTGTACATACTGATTGATGCTATTTCTGAATAATAAGTTAGACTTTTGATGAATCACA
TTAATGACTTTTGACATATTTTCTAAATATTATGAACCTGTAGCCAGATATCTATTTTAAATCA
CATAAGTACTATTATGCTTGTAATTTTGCCATGTGCATATATGATCATGCTTGAATTTAGAGTT
ATGTACACCAGCTACCATGGTTCAAGTAAGCGCTAGACATTAGAGGGTCAGTGAGGCCGGTGCC
TAACGGTAGGAGCGTCTAGTTGCTGCCGCCAAGGCGCACCTAGGTCCCAGGACCAACTTGGCTA
GGGACTTTGAAGCAGTTAGCGAGCATATATGACATAAAAGAAACTGTTCACCATTTATATTGCA
AAACTAGATCCCCCAATGCAGAGCAGCTGCATAATGCACCATCAAATGCCAAATTGCTGCGGCT
ACTTGGTGCCTAGAGCCAATTTTTAGGACACTGCCAGCTACTCAGATTTCTAAAGCATATTCTT
CATTTTTCTTCAATGATGTCCTTTCAGGAATGTTCTAGTCATAAAATAGCAGCTCGTCCTGAAA
GGCGCCGACAGTTTGAGAATGACCTTCGTTCATCAGCCGAAGTTGCACTTAGTCTATTGACTGC
TTGCTTGGGTATTGATCAACTGAAAGAACAGGTCAATTTCCTTCTCTTCAAGATTGTTTTTCAT
TGGCACCTTAGGAGCTTAAGTGGCAAAGAAAATATTTTAAGTTTGCATGTTAGGATAAATATTT
TAAGCTTGCATGTTAGGATCTCTTCAGAGATAACAGGCAGTTTATTCACTGCAAAGTTATTCAT
AACTCATCTCCTGTGAAGCATCTATTACCACATTTCATTGGTTATATTATGACAGATGACATCC
TAGGCTAATAGAAAGGTTTGACTGGAGGGCTGGTTTATAATGTGCTATTCTCATTATCTTGGTA
TATGAGAATGGTGCTATTTTATGTTTCATGTCAATTTCATATTCCACTTTAATATACTTAGATA
GTGAGAAACATTCAGCCTTTCCAGACAGCAATATCACATTCAGGCATGCTTTAATATGCTTGAT
CTCAACCCAAAAATGCATAAAACCTGCAATCTGTAAACATAAATCAATTTATGTGAGGTTTATC
TGTAGCTAACCTGATTGTTCCTTTTCAGGTTCTGGAGGGTTTTGCTTCTTGGCTTCGTTTTTGT
CATGGGTATGCTTATTGGACTTTAATCTAATAGCACTCTATTCCTTTATAATGTAGCTTTTGTA
GTACATTGAACATTTTCTATTCTTTGTAAATATTAAACAACTGCTTCATGACAGTATTGGCCTC
AGGAATTTACTGAGTTATTCTTTCTGCCAGAATCTCCGCATCTAATCTTGCTTCGCTTCCTTTG
GTCTATACGGCACTTTCTTCGTTGAACTCTGACCAATTTTTGGAGGCAGCTGTAAATG
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021