Detail information of BGIOSGA014732_circ_g.1


General Information
CircRNA Name BGIOSGA014732_circ_g.1
ID in PlantcircBase osi_circ_014569
Alias Chr04:26151661_26152083(MH63RS2)
Organism Oryza sativa ssp. indica
Position chr4: 24276544-24276966  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene BGIOSGA014732
Parent gene annotation NA
Parent gene strand -
Alternative splicing NA
Support reads NA
Tissues root, leaf, panicle
Exon boundary   No-No
Splicing signals   CT-AA
Number of exons covered BGIOSGA014732-TA:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   AGTTCATCCTTGTCTACTAAATCAATCTTGCAGTCTACAAAATCCTCCTCCTCCTCATCACTAT
CATCACCGTAGTTGTCGTCCTCACCATACTCATCTTcttccttcttgatagaattttcaggggt
tgcacctacctttggcactgaatttacattctccttattcgactttttagctggtgctgcttgg
gcttttac
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence CTTCCTTCTTGATAGAATTTTCAGGGGTTGCACCTACCTTTGGCACTGAATTTACATTCTCCTT
ATTCGACTTTTTAGCTGGTGCTGCTTGGGCTTTTACTTCCTTCCACTGTGACATATTCTGAACC
GGATTCAGCACAGGACGGACATACTGGCCTCTGTCGCGATGATTGTTTCTCTGAATTAGAGGGC
TTTGTTCCTCTACAGAGGTACTACTGCTCTTAGGTGCAGGGCTGCTGACTTCATTGTCATTCTG
CTGATCTTTGTACATTTGCAATGAGAAAAGAGACTCATGGGACTCCTGCTTGCTATCTTCAGTG
TACAGTTCATCCTTGTCTACTAAATCAATCTTGCAGTCTACAAAATCCTCCTCCTCCTCATCAC
TATCATCACCGTAGTTGTCGTCCTCACCATACTCATCTT
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021