Plant Circular RNA Database

Detail information of Os07g0163500_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os07g0163500_circ_g.2
					
						ID in PlantcircBase
						osa_circ_032863
					
						Alias
						Os_ciR4431
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr7: 3393007-3396898  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Os07g0163500						
					
						Parent gene annotation
						
							Val-tRNA synthetase, Regulation of chloroplast ribosome biogenes
is, Early chloroplast development (Os07t0163500-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os07g0163500_circ_g.1 Os07g0163500_circ_g.3 						
					
						Support reads
						5
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os07t0163500-01:11

General Information
CircRNA Name	Os07g0163500_circ_g.2
ID in PlantcircBase	osa_circ_032863
Alias	Os_ciR4431
Organism	Oryza sativa
Position	chr7: 3393007-3396898 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	find_circ
Parent gene	Os07g0163500
Parent gene annotation	Val-tRNA synthetase, Regulation of chloroplast ribosome biogenes is, Early chloroplast development (Os07t0163500-01)
Parent gene strand	+
Alternative splicing	Os07g0163500_circ_g.1 Os07g0163500_circ_g.3
Support reads	5
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os07t0163500-01:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ACGAACTCATCGATAGGGTCAGCACAAGCTACGACAAATTTTTCTTTGGCGATGCAGCTAGAGA
AATCTACGATTTCTTTTGGGGGGACTTTGCTGATTGgatgaacgttatgcaaaatatgtgggca
aattggctattgttcccttgacatttgggagacatgttcctattattgctgaccgggtaggaat
taatatta

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1304
Transcript exons: 3393007-3393090,3393641-3393789,3394223-3394340,3394431-
3394547,3394798-3395018,3395444-3395533,3395680-3395791,
3396242-3396352,3396427-3396564,3396656-3396706,3396786-
3396898
GATGAACGTTATGCAAAATATGTGGGCAAATTGGCTATTGTTCCCTTGACATTTGGGAGACATG
TTCCTATTATTGCTGACCGGTATGTTGATCCAGAATTTGGAACAGGGGTGCTGAAGATTAGCCC
TGGACATGATCATAACGATTATCATATTGCACGAAAACTTGGGTTGCCAATTCTCAATGTTATG
AACAAAGATGGTACACTAAATGATGTTGCTGGATTATACAGTGGCATGGATCGTTTTGAGGCAC
GGGAGAAGTTGTGGTCTGACCTTGTTGAGACTAACTTGGCAGTAAAGAAGGAACCCTATACACT
TCGAGTTCCTAGATCTCAACGGGGTGGTGAAGTAATAGAGCCATTGATTAGTAAACAGTGGTTT
GTCACTATGGATCCATTAGCTGAAAAGGCCCTTCATGCTGTTGAAAAAGGGCAACTAACTATTC
TTCCAGAGAGATTTGAAAAGATATATAATCATTGGTTGACAAACATAAAGGATTGGTGTATTAG
TAGGCAACTGTGGTGGGGTCATCGGATCCCTGTTTGGTACATCGTTGGAAAGAAATGTGAGGAA
GACTATATTGTTGCTAGAAGTGCAGAGGAGGCACTTGCAAAGGCTCAGGAAAAATATGGAAAAT
CAGTTGAAATATATCAAGATCCTGATGTTCTTGACACTTGGTTCTCAAGTGCTCTGTGGCCTTT
CAGTACACTTGGTTGGCCAGACCTATCCAGTGAGGATTTTAAGCACTTTTATCCTGCAACTGTT
CTTGAGACTGGCCATGACATTTTGTTCTTCTGGGTTGCACGAATGGTCATGATGGGAATTGAGT
TTACAGGAACTGTGCCATTTTCTTATGTTTATCTTCATGGTCTCATCCGGGACTCTGAGGGACG
AAAAATGTCTAAGACACTGGGGAATGTCATTGACCCTCTAGATACCATCAAAGAGTACGGGACA
GATGCATTGAGATTTACACTTTCCATGGGTACCGCAGGCCAGGACCTTAATCTCTCTACAGAAA
GATTGACATCAAACAAGGCTTTCACCAACAAACTCTGGAATGCAGGCAAATTTTTGTTGCAGAA
TTTGCCTGATAGAAGTGATGCCACTGCATGGGATGTCTTGTTAGCAAATAAGTTTGATACAGAA
GCGTCACTTCAGAAACTACCACTGCCAGAATCCTGGGTGGTGACAGGATTACACGAACTCATCG
ATAGGGTCAGCACAAGCTACGACAAATTTTTCTTTGGCGATGCAGCTAGAGAAATCTACGATTT
CTTTTGGGGGGACTTTGCTGATTG
Transcript length: 138
Transcript exons: 3393007-3393061,3396816-3396898
GATGAACGTTATGCAAAATATGTGGGCAAATTGGCTATTGTTCCCTTGACATTTGGTCAGCACA
AGCTACGACAAATTTTTCTTTGGCGATGCAGCTAGAGAAATCTACGATTTCTTTTGGGGGGACT
TTGCTGATTG
						
					

						Genomic sequence
						
							GATGAACGTTATGCAAAATATGTGGGCAAATTGGCTATTGTTCCCTTGACATTTGGGAGACATG
TTCCTATTATTGCTGACCGGGTAGGAATTAATATTACCTGTAATATTTGTATGATTCTAATAAC
CAAGAAAGTATGTTGCAACACGGATCAAAGTAAAGCAATTCAACAGTACCGTATTCACTAGATG
TTGGCGTTCTCTTATCTTTATTGTGTTGTCCCAATGGCACATCTACATGCAAATGTGATGCCAT
CGCTTGTCAGTTCAAGTCAGAACTCAGGAAAGCTGTTGTTTCTGTTGAGGCAAACTTCACTGTT
GGCACTGTTTTTGGGGCTAAAATGCCAACGTTTTGCTTGCTGAGCTGACGAAAGCTTTTGCTTG
ACGAATAGCCATACATACAAAAGATGTGCATTCTTTGTATAAGGGCTTCACACTTGTATGCCCT
CGTTTGTGGTTTGATCTTAAACATACTTTGTATGACTTCATGTGTATCTCCCCTGGCTCAAGAA
TCTCACTTAATGATAGGCATGCATTAGGTTGCAAACCCGGTTTATAAAGAAAGGTGTTCTTTTA
TATAATCGATAGACTTCGATTATCCCTTTTAACAATATATCGGTTTTATGATCTACAGTATGTT
GATCCAGAATTTGGAACAGGGGTGCTGAAGATTAGCCCTGGACATGATCATAACGATTATCATA
TTGCACGAAAACTTGGGTTGCCAATTCTCAATGTTATGAACAAAGATGGTACACTAAATGATGT
TGCTGGATTATACAGGTATTAATTTTCGTTCAAACTTCAATTTAAGTAACCTGTTCACTTATTT
CCCTTTGAATTTGTTTAGACTTGCAATTTTCAATGTTTGGTTTCTCTGTTCTATTCCATGTTGC
ATCATAACTACTATCTAGGGACTGTAGTTTGTGCTGCTTATAAACCCATGTATCCTCTTTGCAA
CACGACCAGTATTTATCTTCTATTATAACATGGAAATTTGAGTATAGTAAAATTGCTGTTGGAA
AATTTAAGAGATTCTGTGGCTTTTAGCCTTCACAATCAGTGGAAACAGAAAACAGTCAATTCGA
CCTCAATTATTTCATATCGAAGAGAATGTACAATATTTGTTCGATTATACTTGCTCCGCAGGCA
ACACAGCTGCAGAGCCCTCTGTATTTGACATGTTCTTGACCTTGACTTTGCTATCTTTATTCAG
TGGCATGGATCGTTTTGAGGCACGGGAGAAGTTGTGGTCTGACCTTGTTGAGACTAACTTGGCA
GTAAAGAAGGAACCCTATACACTTCGAGTTCCTAGATCTCAACGGGGTGGTGAAGTGTGATCTT
TTCTCCTGTACCTGCTCATACATGTAGGCTAACGATGCTTACCATAAAGATTAATGAACTTAAC
TTTTGTGTGTCACTAGGTAATAGAGCCATTGATTAGTAAACAGTGGTTTGTCACTATGGATCCA
TTAGCTGAAAAGGCCCTTCATGCTGTTGAAAAAGGGCAACTAACTATTCTTCCAGAGAGATTTG
AAAAGGTAATACATTAATCATTAGCTTTTCTATGCACCAATCTTCTGCTCACTAGTAAGCACAC
ATAAAACATGTCTAAAGTTTTTATTGGAACTGCTAAGCAGGAATCTGTCTCTGTATTCCCACTT
TCTCAGTAAAACTATGCATATGCCAAATAAAGAGTTAATATCTCTGGTTATATCTTACTCCTGT
AAAAATGATTTCTTTGAACTGACTTTGCTGCTCTCCAATAATTTATTTGTGCTGCTGCTGCAGA
TATATAATCATTGGTTGACAAACATAAAGGATTGGTGTATTAGTAGGCAACTGTGGTGGGGTCA
TCGGATCCCTGTTTGGTACATCGTTGGAAAGAAATGTGAGGAAGACTATATTGTTGCTAGAAGT
GCAGAGGAGGCACTTGCAAAGGCTCAGGAAAAATATGGAAAATCAGTTGAAATATATCAAGATC
CTGATGTTCTTGACACTTGGTTCTCAAGGTTTGTCTTCCATCTGTAAAGCTGTATGCTCGTAAT
GACTTAGCATACATGTATTTTCCTCTCCTTGTCCGCTTCCTGAAGTTTTTTTTTGTTTTGCTTT
GTTCATAACATGGGCCTAAAATAGCTTTTACAACTTGCATTGTAGAGCAGAAATGTGTTTATTA
AGATGTCTGAATAGGTTTTAGCCATCTCCTTGTATTATTTTTCATGTACAACAGTAAGATGAAT
AGTTAATGGAGCTCCTATACTGCAGTATTCTTTTTCCCTTACAGTTTCTGATTGGCATCTGGGA
TATCTGTATGAACCTTATTTCCATGTGCTGTACCATGTAGAAGTATAAACACTTTCAGACACAA
ATCGCTACAGGTATTAAGAAAACTGCATATAGTTTTTTGTTGTTTTGACTTGTTGCAGTTGTCC
TGCAGTGCTCTGTGGCCTTTCAGTACACTTGGTTGGCCAGACCTATCCAGTGAGGATTTTAAGC
ACTTTTATCCTGCAACTGTTCTTGAGACTGGGTATGTTATCTTCAGCAACAACTTTATTTACCT
TCTGATCTTTCAGTCCAGCGATAATACTGTTGCGCTGCTCTTTATGTTGATTATTTATTTTTCC
ATTTACCTCCATTATATTATAGCTTTCTCTCTCTTTTTTTTTTTGGCAGCCATGACATTTTGTT
CTTCTGGGTTGCACGAATGGTCATGATGGGAATTGAGTTTACAGGAACTGTGCCATTTTCTTAT
GTTTATCTTCATGGTCTCATCCGGGACTCTGAGGTGAGAGAGGAGCACCTTAATCACTAGTTCC
TGTTCTGTACTTTTGAGGGAGAGTCGATTAAACAAACTTTTCTTGTAGTTGTAAAATGACATGA
TTGAACTTCTAAAGGGCATCAACCATTAAAGGCTCATAACTTGGAAATTTTGTTTTCTTTTGAG
CCGGGATTGAACCCTCTCAGATCAAACATTGCACCTGATTGGGGTCTCATGCTTTATGTGCTAA
TTGACTGTATGATGCTCTAGTGCAGCTAGTCACATACTGCACATTACCTCAAATTTGAAGTCAC
TGCCTCCTTTTATCTGATATAAAAGTGGTATCACCAGTTAAACTGTTAAATGAGCCCATTGTGA
AATCTGTTTTGTACCCTTAGTCATCGTGTTCATCTGAGTTGTTTCTGTTGCCATATTAGCTCTC
TGTTTCCATGGACTAATTAGCAAGTTAATTTTCAGGGACGAAAAATGTCTAAGACACTGGGGAA
TGTCATTGACCCTCTAGATACCATCAAAGAGTACGGGACAGATGCATTGAGATTTACACTTTCC
ATGGGTACCGCAGGCCAGGTTTGCTTATACAGTCGCTTTTGTATTTATCAAGATTGTTTGATTT
TGTGCTGTTAATACCCTTTTTGCTTCAGGACCTTAATCTCTCTACAGAAAGATTGACATCAAAC
AAGGCTTTCACCAACAAACTCTGGAATGCAGGCAAATTTTTGTTGCAGAATTTGCCTGATAGAA
GTGATGCCACTGCATGGGATGTCTTGTTAGCAAATAAGGTATCTGATTGAATTTCGAATTGCAC
TTGATGCATTGACATAATTTAGTTCTTTTTAGAACTGTTGCTAACACCTTGCATCTATTGCCCA
GTTTGATACAGAAGCGTCACTTCAGAAACTACCACTGCCAGAATCCTGGGTGGTGAGTCAGAGT
ACATTACTATCTCGAATTATTTGATTAATGTTCAGTTTGTTAATGAAGAGAATACACTACGATC
CAGGTGACAGGATTACACGAACTCATCGATAGGGTCAGCACAAGCTACGACAAATTTTTCTTTG
GCGATGCAGCTAGAGAAATCTACGATTTCTTTTGGGGGGACTTTGCTGATTG
						
					

			
		

Sequences
Splice junction sequence	ACGAACTCATCGATAGGGTCAGCACAAGCTACGACAAATTTTTCTTTGGCGATGCAGCTAGAGA AATCTACGATTTCTTTTGGGGGGACTTTGCTGATTGgatgaacgttatgcaaaatatgtgggca aattggctattgttcccttgacatttgggagacatgttcctattattgctgaccgggtaggaat taatatta
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1304 Transcript exons: 3393007-3393090,3393641-3393789,3394223-3394340,3394431- 3394547,3394798-3395018,3395444-3395533,3395680-3395791, 3396242-3396352,3396427-3396564,3396656-3396706,3396786- 3396898 GATGAACGTTATGCAAAATATGTGGGCAAATTGGCTATTGTTCCCTTGACATTTGGGAGACATG TTCCTATTATTGCTGACCGGTATGTTGATCCAGAATTTGGAACAGGGGTGCTGAAGATTAGCCC TGGACATGATCATAACGATTATCATATTGCACGAAAACTTGGGTTGCCAATTCTCAATGTTATG AACAAAGATGGTACACTAAATGATGTTGCTGGATTATACAGTGGCATGGATCGTTTTGAGGCAC GGGAGAAGTTGTGGTCTGACCTTGTTGAGACTAACTTGGCAGTAAAGAAGGAACCCTATACACT TCGAGTTCCTAGATCTCAACGGGGTGGTGAAGTAATAGAGCCATTGATTAGTAAACAGTGGTTT GTCACTATGGATCCATTAGCTGAAAAGGCCCTTCATGCTGTTGAAAAAGGGCAACTAACTATTC TTCCAGAGAGATTTGAAAAGATATATAATCATTGGTTGACAAACATAAAGGATTGGTGTATTAG TAGGCAACTGTGGTGGGGTCATCGGATCCCTGTTTGGTACATCGTTGGAAAGAAATGTGAGGAA GACTATATTGTTGCTAGAAGTGCAGAGGAGGCACTTGCAAAGGCTCAGGAAAAATATGGAAAAT CAGTTGAAATATATCAAGATCCTGATGTTCTTGACACTTGGTTCTCAAGTGCTCTGTGGCCTTT CAGTACACTTGGTTGGCCAGACCTATCCAGTGAGGATTTTAAGCACTTTTATCCTGCAACTGTT CTTGAGACTGGCCATGACATTTTGTTCTTCTGGGTTGCACGAATGGTCATGATGGGAATTGAGT TTACAGGAACTGTGCCATTTTCTTATGTTTATCTTCATGGTCTCATCCGGGACTCTGAGGGACG AAAAATGTCTAAGACACTGGGGAATGTCATTGACCCTCTAGATACCATCAAAGAGTACGGGACA GATGCATTGAGATTTACACTTTCCATGGGTACCGCAGGCCAGGACCTTAATCTCTCTACAGAAA GATTGACATCAAACAAGGCTTTCACCAACAAACTCTGGAATGCAGGCAAATTTTTGTTGCAGAA TTTGCCTGATAGAAGTGATGCCACTGCATGGGATGTCTTGTTAGCAAATAAGTTTGATACAGAA GCGTCACTTCAGAAACTACCACTGCCAGAATCCTGGGTGGTGACAGGATTACACGAACTCATCG ATAGGGTCAGCACAAGCTACGACAAATTTTTCTTTGGCGATGCAGCTAGAGAAATCTACGATTT CTTTTGGGGGGACTTTGCTGATTG Transcript length: 138 Transcript exons: 3393007-3393061,3396816-3396898 GATGAACGTTATGCAAAATATGTGGGCAAATTGGCTATTGTTCCCTTGACATTTGGTCAGCACA AGCTACGACAAATTTTTCTTTGGCGATGCAGCTAGAGAAATCTACGATTTCTTTTGGGGGGACT TTGCTGATTG
Genomic sequence	GATGAACGTTATGCAAAATATGTGGGCAAATTGGCTATTGTTCCCTTGACATTTGGGAGACATG TTCCTATTATTGCTGACCGGGTAGGAATTAATATTACCTGTAATATTTGTATGATTCTAATAAC CAAGAAAGTATGTTGCAACACGGATCAAAGTAAAGCAATTCAACAGTACCGTATTCACTAGATG TTGGCGTTCTCTTATCTTTATTGTGTTGTCCCAATGGCACATCTACATGCAAATGTGATGCCAT CGCTTGTCAGTTCAAGTCAGAACTCAGGAAAGCTGTTGTTTCTGTTGAGGCAAACTTCACTGTT GGCACTGTTTTTGGGGCTAAAATGCCAACGTTTTGCTTGCTGAGCTGACGAAAGCTTTTGCTTG ACGAATAGCCATACATACAAAAGATGTGCATTCTTTGTATAAGGGCTTCACACTTGTATGCCCT CGTTTGTGGTTTGATCTTAAACATACTTTGTATGACTTCATGTGTATCTCCCCTGGCTCAAGAA TCTCACTTAATGATAGGCATGCATTAGGTTGCAAACCCGGTTTATAAAGAAAGGTGTTCTTTTA TATAATCGATAGACTTCGATTATCCCTTTTAACAATATATCGGTTTTATGATCTACAGTATGTT GATCCAGAATTTGGAACAGGGGTGCTGAAGATTAGCCCTGGACATGATCATAACGATTATCATA TTGCACGAAAACTTGGGTTGCCAATTCTCAATGTTATGAACAAAGATGGTACACTAAATGATGT TGCTGGATTATACAGGTATTAATTTTCGTTCAAACTTCAATTTAAGTAACCTGTTCACTTATTT CCCTTTGAATTTGTTTAGACTTGCAATTTTCAATGTTTGGTTTCTCTGTTCTATTCCATGTTGC ATCATAACTACTATCTAGGGACTGTAGTTTGTGCTGCTTATAAACCCATGTATCCTCTTTGCAA CACGACCAGTATTTATCTTCTATTATAACATGGAAATTTGAGTATAGTAAAATTGCTGTTGGAA AATTTAAGAGATTCTGTGGCTTTTAGCCTTCACAATCAGTGGAAACAGAAAACAGTCAATTCGA CCTCAATTATTTCATATCGAAGAGAATGTACAATATTTGTTCGATTATACTTGCTCCGCAGGCA ACACAGCTGCAGAGCCCTCTGTATTTGACATGTTCTTGACCTTGACTTTGCTATCTTTATTCAG TGGCATGGATCGTTTTGAGGCACGGGAGAAGTTGTGGTCTGACCTTGTTGAGACTAACTTGGCA GTAAAGAAGGAACCCTATACACTTCGAGTTCCTAGATCTCAACGGGGTGGTGAAGTGTGATCTT TTCTCCTGTACCTGCTCATACATGTAGGCTAACGATGCTTACCATAAAGATTAATGAACTTAAC TTTTGTGTGTCACTAGGTAATAGAGCCATTGATTAGTAAACAGTGGTTTGTCACTATGGATCCA TTAGCTGAAAAGGCCCTTCATGCTGTTGAAAAAGGGCAACTAACTATTCTTCCAGAGAGATTTG AAAAGGTAATACATTAATCATTAGCTTTTCTATGCACCAATCTTCTGCTCACTAGTAAGCACAC ATAAAACATGTCTAAAGTTTTTATTGGAACTGCTAAGCAGGAATCTGTCTCTGTATTCCCACTT TCTCAGTAAAACTATGCATATGCCAAATAAAGAGTTAATATCTCTGGTTATATCTTACTCCTGT AAAAATGATTTCTTTGAACTGACTTTGCTGCTCTCCAATAATTTATTTGTGCTGCTGCTGCAGA TATATAATCATTGGTTGACAAACATAAAGGATTGGTGTATTAGTAGGCAACTGTGGTGGGGTCA TCGGATCCCTGTTTGGTACATCGTTGGAAAGAAATGTGAGGAAGACTATATTGTTGCTAGAAGT GCAGAGGAGGCACTTGCAAAGGCTCAGGAAAAATATGGAAAATCAGTTGAAATATATCAAGATC CTGATGTTCTTGACACTTGGTTCTCAAGGTTTGTCTTCCATCTGTAAAGCTGTATGCTCGTAAT GACTTAGCATACATGTATTTTCCTCTCCTTGTCCGCTTCCTGAAGTTTTTTTTTGTTTTGCTTT GTTCATAACATGGGCCTAAAATAGCTTTTACAACTTGCATTGTAGAGCAGAAATGTGTTTATTA AGATGTCTGAATAGGTTTTAGCCATCTCCTTGTATTATTTTTCATGTACAACAGTAAGATGAAT AGTTAATGGAGCTCCTATACTGCAGTATTCTTTTTCCCTTACAGTTTCTGATTGGCATCTGGGA TATCTGTATGAACCTTATTTCCATGTGCTGTACCATGTAGAAGTATAAACACTTTCAGACACAA ATCGCTACAGGTATTAAGAAAACTGCATATAGTTTTTTGTTGTTTTGACTTGTTGCAGTTGTCC TGCAGTGCTCTGTGGCCTTTCAGTACACTTGGTTGGCCAGACCTATCCAGTGAGGATTTTAAGC ACTTTTATCCTGCAACTGTTCTTGAGACTGGGTATGTTATCTTCAGCAACAACTTTATTTACCT TCTGATCTTTCAGTCCAGCGATAATACTGTTGCGCTGCTCTTTATGTTGATTATTTATTTTTCC ATTTACCTCCATTATATTATAGCTTTCTCTCTCTTTTTTTTTTTGGCAGCCATGACATTTTGTT CTTCTGGGTTGCACGAATGGTCATGATGGGAATTGAGTTTACAGGAACTGTGCCATTTTCTTAT GTTTATCTTCATGGTCTCATCCGGGACTCTGAGGTGAGAGAGGAGCACCTTAATCACTAGTTCC TGTTCTGTACTTTTGAGGGAGAGTCGATTAAACAAACTTTTCTTGTAGTTGTAAAATGACATGA TTGAACTTCTAAAGGGCATCAACCATTAAAGGCTCATAACTTGGAAATTTTGTTTTCTTTTGAG CCGGGATTGAACCCTCTCAGATCAAACATTGCACCTGATTGGGGTCTCATGCTTTATGTGCTAA TTGACTGTATGATGCTCTAGTGCAGCTAGTCACATACTGCACATTACCTCAAATTTGAAGTCAC TGCCTCCTTTTATCTGATATAAAAGTGGTATCACCAGTTAAACTGTTAAATGAGCCCATTGTGA AATCTGTTTTGTACCCTTAGTCATCGTGTTCATCTGAGTTGTTTCTGTTGCCATATTAGCTCTC TGTTTCCATGGACTAATTAGCAAGTTAATTTTCAGGGACGAAAAATGTCTAAGACACTGGGGAA TGTCATTGACCCTCTAGATACCATCAAAGAGTACGGGACAGATGCATTGAGATTTACACTTTCC ATGGGTACCGCAGGCCAGGTTTGCTTATACAGTCGCTTTTGTATTTATCAAGATTGTTTGATTT TGTGCTGTTAATACCCTTTTTGCTTCAGGACCTTAATCTCTCTACAGAAAGATTGACATCAAAC AAGGCTTTCACCAACAAACTCTGGAATGCAGGCAAATTTTTGTTGCAGAATTTGCCTGATAGAA GTGATGCCACTGCATGGGATGTCTTGTTAGCAAATAAGGTATCTGATTGAATTTCGAATTGCAC TTGATGCATTGACATAATTTAGTTCTTTTTAGAACTGTTGCTAACACCTTGCATCTATTGCCCA GTTTGATACAGAAGCGTCACTTCAGAAACTACCACTGCCAGAATCCTGGGTGGTGAGTCAGAGT ACATTACTATCTCGAATTATTTGATTAATGTTCAGTTTGTTAATGAAGAGAATACACTACGATC CAGGTGACAGGATTACACGAACTCATCGATAGGGTCAGCACAAGCTACGACAAATTTTTCTTTG GCGATGCAGCTAGAGAAATCTACGATTTCTTTTGGGGGGACTTTGCTGATTG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.234377811

Conservation Information
Conserved circRNAs	NA
PMCS	0.234377811

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							3393747-3393052(+)
3393711-3396868(-)
						
						Potential amino acid sequence
						
							MNKDGTLNDVAGLYSGMDRFEAREKLWSDLVETNLAVKKEPYTLRVPRSQRGGEVIEPLISKQW
FVTMDPLAEKALHAVEKGQLTILPERFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYIVGKKCE
EDYIVARSAEEALAKAQEKYGKSVEIYQDPDVLDTWFSSALWPFSTLGWPDLSSEDFKHFYPAT
VLETGHDILFFWVARMVMMGIEFTGTVPFSYVYLHGLIRDSEGRKMSKTLGNVIDPLDTIKEYG
TDALRFTLSMGTAGQDLNLSTERLTSNKAFTNKLWNAGKFLLQNLPDRSDATAWDVLLANKFDT
EASLQKLPLPESWVVTGLHELIDRVSTSYDKFFFGDAAREIYDFFWGDFADWMNVMQNMWANWL
LFP*(+)
MIIVMIMSRANLQHPCSKFWINIPVSNNRNMSPKCQGNNSQFAHIFCITFIQSAKSPQKKS*(-
)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	3393747-3393052(+) 3393711-3396868(-)
Potential amino acid sequence	MNKDGTLNDVAGLYSGMDRFEAREKLWSDLVETNLAVKKEPYTLRVPRSQRGGEVIEPLISKQW FVTMDPLAEKALHAVEKGQLTILPERFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYIVGKKCE EDYIVARSAEEALAKAQEKYGKSVEIYQDPDVLDTWFSSALWPFSTLGWPDLSSEDFKHFYPAT VLETGHDILFFWVARMVMMGIEFTGTVPFSYVYLHGLIRDSEGRKMSKTLGNVIDPLDTIKEYG TDALRFTLSMGTAGQDLNLSTERLTSNKAFTNKLWNAGKFLLQNLPDRSDATAWDVLLANKFDT EASLQKLPLPESWVVTGLHELIDRVSTSYDKFFFGDAAREIYDFFWGDFADWMNVMQNMWANWL LFP(+) MIIVMIMSRANLQHPCSKFWINIPVSNNRNMSPKCQGNNSQFAHIFCITFIQSAKSPQKKS(- )
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015

circRNA

Detail information of Os07g0163500_circ_g.2

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