circRNA
Detailed infomation of each circRNA
Detail information of CSA029522_g_circ1
| General Information | |
|---|---|
| CircRNA Name | CSA029522_g_circ1 |
| ID in PlantcircBase | csi_circ_001659 |
| Alias | Cs-circRNA2278 |
| Organism | Camellia sinensis |
| Position | chrSc0001941: 326091-329293 JBrowse» |
| Reference genome | v1 |
| Type | e-circRNA |
| Identification method | CIRCexplorer, CIRI2 |
| Parent gene | CSA029522 |
| Parent gene annotation | NA |
| Parent gene strand | + |
| Alternative splicing | NA |
| Support reads | NA |
| Tissues | leaf |
| Exon boundary | NA-NA |
| Splicing signals | GT-AG |
| Number of exons covered | CSA029522.1:4 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | sly_circ_000707 |
| PMCS |
| Functional Information | |
|---|---|
| Coding potential | Y |
| Potential coding position |
326468-326120(+) |
| Potential amino acid sequence |
MNQDNYLEEAFKMRNVLEELLKTHHGRRKPTILGLREHIFTGRLGYHEIYRIKLPGPPTEIGEG KPENQNHAIIFTRGEALQTIDMNQVSIFTCCLYR*(+) |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Tong et al., 2018 |
