Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G16710_circ_g.6 |
ID in PlantcircBase | ath_circ_002944 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 5721899-5721997 JBrowse» |
Reference genome | TAIR10.38 |
Type | u-circRNA |
Identification method | CIRCexplorer, CIRI-full |
Parent gene | AT1G16710 |
Parent gene annotation |
Histone acetyltransferase HAC12 |
Parent gene strand | + |
Alternative splicing | AT1G16710_circ_g.5 |
Support reads | 1 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | AT1G16710.7:1 AT1G16710.9:1 AT1G16710.8:1 AT1G16710.3:1 AT1G16710.1:1 AT1G16710.4:1 AT1G16710.5:1 AT1G16710.6:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.083333333 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |