Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G16720_circ_g.9 |
ID in PlantcircBase | ath_circ_002954 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 5725126-5725398 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | PcircRNA_finder |
Parent gene | AT1G16720 |
Parent gene annotation |
high chlorophyll fluorescence phenotype 173 |
Parent gene strand | + |
Alternative splicing | AT1G16720_circ_g.1 AT1G16720_circ_g.2 AT1G16720_circ_g.3 AT1G16720_circ_g.4 AT1G16720_circ_g.5 AT1G16720_circ_g.6 AT1G16720_circ_g.7 AT1G16720_circ_g.8 AT1G16720_circ_g.10 |
Support reads | 67 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G16720.2:2 AT1G16720.1:2 AT1G16720.3:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.162088218 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |