Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d015138_circ_g.41 |
ID in PlantcircBase | zma_circ_004898 |
Alias | seedling_test_circ_000050 |
Organism | Zea mays |
Position | chr5: 76851886-76852621 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d015138 |
Parent gene annotation |
protein_coding |
Parent gene strand | - |
Alternative splicing | Zm00001d015138_circ_g.42 Zm00001d015138_circ_g.43 Zm00001d015138_circ_g.44 Zm00001d015138_circ_g.45 Zm00001d015138_circ_g.46 Zm00001d015138_circ_g.47 Zm00001d015138_circ_g.48 Zm00001d015138_circ_g.49 Zm00001d015138_circ_g.50 |
Support reads | NA |
Tissues | seedling |
Exon boundary | No-No |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d015138_T002:1 Zm00001d015138_T006:1 Zm00001d015138_T007:1 Zm00001d015138_T004:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.068114855 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |