Plant Circular RNA Database

Detail information of GLYMA_16G112800_circ_g.1

			
						 General Information
					
						CircRNA Name
						GLYMA_16G112800_circ_g.1
					
						ID in PlantcircBase
						gma_circ_007331
					
						Alias
						gma-circRNA2220
					
						Organism
						
							Glycine max						
					
						Position
						
							chr16: 25035689-25040379  JBrowse»						
					
						Reference genome
						
							v2.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							GLYMA_16G112800						
					
						Parent gene annotation
						
							hypothetical protein
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						flower bud
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						KRH07820:8
KRH07819:8

General Information
CircRNA Name	GLYMA_16G112800_circ_g.1
ID in PlantcircBase	gma_circ_007331
Alias	gma-circRNA2220
Organism	Glycine max
Position	chr16: 25035689-25040379 JBrowse»
Reference genome	v2.0.38
Type	e-circRNA
Identification method	find_circ
Parent gene	GLYMA_16G112800
Parent gene annotation	hypothetical protein
Parent gene strand	+
Alternative splicing	NA
Support reads	NA
Tissues	flower bud
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	KRH07820:8 KRH07819:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTTTCGCATGAGATCTTTGATGGATATTCCTAGGCTTAAATTGCAGCTGCTTAATATGCCCATG
GAGGCAATCTTGAAACATAAATTGAGTCCCTTGAAGgagattgtcatgtatgtcgagaatatgt
taaggctggagagtggtgcaattggagaaactgtcggttctataatgctgcctgctcttgtgga
taggttgc

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GAGATTGTCATGTATGTCGAGAATATGTTAAGGCTGGAGAGTGGTGCAATTGGAGAAACTGTCG
GTTCTATAATGCTGCCTGCTCTTGTGGATAGGTTGCTAGAGTTGGATGTAAGTTGGTTAATCCT
CAAACATTTTGTCAAAGAAAAGTTGGGTCCTTTGGCCAACAATATAATTCCTATTAAACTGGTT
GTAGGTGGAAATTGGATGGGATGGAATCCTGCAAGAAGATGCCAAAGGCATATTTGAAATGGAG
TTAGAAGATGTTACTGAATTTGCAGATGAGGATGAGAATTGTGATAGTATGGTATGCATCTTAT
TATATATTTACAGTTCATGTTGTGGTCTAATGATGGAATGGTACCTGGAAAATTAAAATATGCA
CCTCATTAAATTGAAGATAGAAATTTGCTTGAAGGTGAAAAATCTCTTATTCCTGTCCTTGGCA
CTGTATTGCTTGTCTGATTTGTATTCTTCTATACATTTTGTGTGTTGTGAAGTTGTTTGATGTT
TATTCCTTCTCTGCACACATTGTTTCCTGAAATGATAATTGCATAGTTGTTAGAACCAGACTGA
ATCGGCTGGAACAACAAGGAACCGGTCAAATCCGGTTTGATCTACCCTCAAAACTAGCCTGGCA
AATAACTGGTGTAAAATCGGTTCCCTGCAAAAAAAAAATAATTAAGTGAAGAAATGGTGGACTT
GAGGCCCAAGGCCCACAAGATTAGAAAAGAGAAAAACACACCCTAAGAGGCTAAAAACCTTAGA
TCAGCCCCATCTACCCAGGTTGTCTGTTAGACAGGTAGCTCATGCTGCTTGTGAAAGTGAAACA
TTAATGCACTCAAATGAAAGAGAGGGAGGTCGGTGGCGATGTGATGGTGGTCGCAAAGTGTCTG
GCACGACGGTAGCGTCCAAATGCCTCGGAAATGTGATCATGCCGCCATGTTCTGCTGCGATCGT
GGGCATGGGCATGACAACCGCACCATTGAAATGCTCCACAACTGATTTTGACAACATAGGTTTA
CACCAGTAAGCATTTCCACTCATCCTTCTTAGCAGGGGGAGTGTGGCCATTAGTTGTGCTTAAC
CTGTATATGTCTTGTAGAATCAATACAAAATTTTCAGTTGAGTTCAGTTGGTAAATATTTGTGT
GACCTCGTGTGAGTCCATCAATTGAGCTGGGTATGTCTCCTTAGTTAATCCTGGTGACTGGTGT
GTTCTTGATCTGTAGTCAAAGGTGCCGCCTACCTTAAAAAGGAGGTGATGATATTAGATGTTAA
GTATTAATATTGCATTAGGTTGCCAAGTGTATCTAGTTTGCCTTTGAGGTGAGCCAACCTATGG
CATTGAATATTTAGTATAGATGCCTGGCAGCAGCTATCTTGTACATAAATTGATCTGCACATAC
AATCCTTGTTGCTACTGTCTTTTATTATACTGTAACCTGATGATTTTTATGAGCTGGGCTTTGT
CAAGTCCACTGCCATTAACAAGGAACTTGCATGGAGCTCCATCTCTGTGAGGAAAGCTCCCTCA
AGTTGCCTGAGGTGCTCCTTATATCCAATCTCTTCTCTTGCCTCTTGTTGGACTTGTATGTGCA
TCTTCTGGCTGCTTTAACTCCAATCATGTCACTACTAACTGAATGCAAAAGCAGCTATACCTGT
AGGCTGTAAGGAGTAATATTTTTCCTTGGGTAGTGGAGTGTGAAATAATCTGTTTAGATTTTCC
TTTTAGATAATTGAATTGTTTGGATAACATCTACGAATTTGAGTGAGCAAAGTTATCTGATTTC
TCATCAACTGTGATACTTGAGATTCTCTCGGTTTAAGGTGCAACATGCAGTTTTGAGGAGCATG
ATCTGATGATCCTAAAAGAATGGTTAAACCTTTAGAGACATTGATTGGTAATGCTAGACTTTGC
AGGTGGTCTAATGCTTTCTTAATTGGCTATGCAGCGTATACCTTTATGCTAGTGTTTCAAATTT
TTTTTGTTAAGTGCCTTGATGATTAATGACTAATTAACTGTTATATATAGAGTTATTGTCTATC
TCTGAGCACTATGTTTATTCATTATGCAATGCTAGTTATTTGGGGAGTATAAGTAATCTTCTTT
GCTGATCATTAATATTTATCTAATACATTATATGCCGTATATTTTGAGTCTTCCGCTTATATTT
CCCATAAATTTTATCATGTTCATTAATATTTATCTAATAATTATCATGATTTTTGGCCTTTTTA
CAGCCTCCGTCAGAGTTATTAAATAGAAAAAATTTGCAAGGCAACTTGGTTGTTGAGAAATTAG
ATAGCCTAATGGTGCTGGCATTTTTGCACCTTGAATCCTGTCAAAGCAGTGGCCGTTTGACTGA
GGTAATCCCATCTATAAAATTACACATATTGCGCACACGAGTGCACACAACATATTTTAGAAGT
GCATCAACAAGACTTCATAATATTCTAATTGTTATCTTTGATTAGGTATTCGATACTCTACTAG
CTTCATTTCAGAGAACCGTATTGAATGCGTACAAGTCAAAATTTACCCAGGTACTGTTTTGCTA
ATCATTACTGTTTCTTACTTGTGTTATGTTTCTTGCCAGTACTATTTCTGTGAAATATGTTCTC
ATTAGTGGCGTAAATTTTGTTTCAGTATGTGATGTTCTATGCATGTGCACTGGACCCTGAAGGA
TGTGGTGTGAAATTTGCCATGGTTCTTGCTGATATGTTTGGATGTGATGTTAATCCCCCTATTA
CTAGGTAAATTTTTATTGTTGCATTCAAGAATTATAATTCTACTGAATCCTGATCGATAATGCT
AAATAAAATATATAGTTGGAATGGGGCTTATTTATACACTCGTCACACTTGGCATAATTAAATT
TACTGCCTGCATTTTTTTTCCATCTGATCAGTGTTGTTAATGGTGGATGGCGGTTCATGGCAGA
AAGCAAAAAATCCGCCATATTAAAATATGGCGGATGGTGTAGCGGAAAATGGCGGATGTCATGG
TGGACAAAAAAAATATATAATTATATATACATATAAATATTAACAAAACAATAGATAAAAAATA
AATATAAATAAAAAATTAAAAAAAAACAATGGATTGCATTCAAATAAATTAAAAAAGTTTCATG
AGTTCACATAATAACCAAGTACCAGCACCAAATAAACTCATTCAAGAGTTCAAAATAACAAAAG
GATAAAAGCATAAAAAACAGAAAAACGGGTGTAAAACAGAAAAATATCATAAAAAAGGGCTGAA
CAGAAAAAAAAAGCAGAAGCAAAAATAAAAGGGGTGTCAAACAGAAAAATATCATAAAAAAAGG
GCTGAACAGAAAAGAAAGGGGTGAACAGAAAAAAAGGGGTGTCAAACAGAAAAAAACAGAACAA
AAACAAGCAAAAAAAAGGAAAACAAAAACAGAATCACGTTGCCGTCCGTTGCAGACTGTAGCGC
CATTGCCGTCGCTGTTTGCCGTGTGCGTGGTGTGTGCCCGCATGCGTGGTGTGCTGTTGCTCGT
CGAGTTGTCGCTGCTGGGTCGTGTGGGGGGAACACGGGGTCGTCGCTGCTGGGCTGCGTTCTGC
ATGCGGGTTCGCGGCTCGGTCGCGTGGGAGGGGCTGCGTTCTGTGCTGTCCATTGTGGTAGGGC
TGCGCCATGCCACCATGACCACGAAAAAAAAACCCTATAATCCGCTATTTTCCGCCATGCCACC
ATGACCGCCATGACGCCGCCATTTGCAACCCGTCACGCCACCGCTATTTGGTGGCATTTTTTCA
AAAATTCACCACGCCTTTCCGCCATGGCCACCATTTGACAACACTGCATCTGATCATGTCTGTA
ACTTGGTCATCAATAATTTGAGTTACAGTGATGCCGAACTGTTTGTCCTCGGTTAATGCCGCAA
TGAGCATGATAATTTTTTTTTTCCAACCAATTTCAAATGTAACTTATGGCATTGGTAATTGTAT
TCATTCATTCTTTGCAGGATGAGTGCTGCTGCTTATCTTGCTAGTTATTTGACTCGTGCAAAGT
TCCTTTCAGCTGCATTGGTCACTAACATCATACAAAGGTTTGGAAACATTTTAAATGCCCACTA
TCCATTTATGATCAAATGTTTTATTTTGTAAGAAAAGCACAATTTTATAAATTGATTTTATGAT
CTTTGGTTGAAATTTCAGCTTGGTTGATTGGTGTTATGCATATTGCAAGTTACGTGATTTTGAT
ATGAACCCACGAGCACATCAAGTTTTTTATTCTGGGTGCCAGGTGAGCCTTGTCAGATTTTTAA
TTGGTGATCTGGGGGTGGGGGGATGGGGGGGCTGTAAGTATGATGCCTTTTCATTATTTCTGAC
AAGGGAATGAAAGTAATGCAACTACTTTTGAACATCACCCCCATCACCATTTATATTGAATTAT
TGATGGATTATTGATTGACGAAGTCATCAATAGAATTCATTGATTTTGCCGTCTTAAATCTGGT
GGAAACACTGGTTATTTCTATGAACTGCAAAAATTATCTATATTCTTGCAGAATATTGATTTTG
TTCGTTATGTTTTTTTGGTGTGAGCAGGCCATTATGTATATTCTGTGTTTTCGCATGAGATCTT
TGATGGATATTCCTAGGCTTAAATTGCAGCTGCTTAATATGCCCATGGAGGCAATCTTGAAACA
TAAATTGAGTCCCTTGAAG
						
					

			
		

Sequences
Splice junction sequence	TTTTCGCATGAGATCTTTGATGGATATTCCTAGGCTTAAATTGCAGCTGCTTAATATGCCCATG GAGGCAATCTTGAAACATAAATTGAGTCCCTTGAAGgagattgtcatgtatgtcgagaatatgt taaggctggagagtggtgcaattggagaaactgtcggttctataatgctgcctgctcttgtgga taggttgc
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GAGATTGTCATGTATGTCGAGAATATGTTAAGGCTGGAGAGTGGTGCAATTGGAGAAACTGTCG GTTCTATAATGCTGCCTGCTCTTGTGGATAGGTTGCTAGAGTTGGATGTAAGTTGGTTAATCCT CAAACATTTTGTCAAAGAAAAGTTGGGTCCTTTGGCCAACAATATAATTCCTATTAAACTGGTT GTAGGTGGAAATTGGATGGGATGGAATCCTGCAAGAAGATGCCAAAGGCATATTTGAAATGGAG TTAGAAGATGTTACTGAATTTGCAGATGAGGATGAGAATTGTGATAGTATGGTATGCATCTTAT TATATATTTACAGTTCATGTTGTGGTCTAATGATGGAATGGTACCTGGAAAATTAAAATATGCA CCTCATTAAATTGAAGATAGAAATTTGCTTGAAGGTGAAAAATCTCTTATTCCTGTCCTTGGCA CTGTATTGCTTGTCTGATTTGTATTCTTCTATACATTTTGTGTGTTGTGAAGTTGTTTGATGTT TATTCCTTCTCTGCACACATTGTTTCCTGAAATGATAATTGCATAGTTGTTAGAACCAGACTGA ATCGGCTGGAACAACAAGGAACCGGTCAAATCCGGTTTGATCTACCCTCAAAACTAGCCTGGCA AATAACTGGTGTAAAATCGGTTCCCTGCAAAAAAAAAATAATTAAGTGAAGAAATGGTGGACTT GAGGCCCAAGGCCCACAAGATTAGAAAAGAGAAAAACACACCCTAAGAGGCTAAAAACCTTAGA TCAGCCCCATCTACCCAGGTTGTCTGTTAGACAGGTAGCTCATGCTGCTTGTGAAAGTGAAACA TTAATGCACTCAAATGAAAGAGAGGGAGGTCGGTGGCGATGTGATGGTGGTCGCAAAGTGTCTG GCACGACGGTAGCGTCCAAATGCCTCGGAAATGTGATCATGCCGCCATGTTCTGCTGCGATCGT GGGCATGGGCATGACAACCGCACCATTGAAATGCTCCACAACTGATTTTGACAACATAGGTTTA CACCAGTAAGCATTTCCACTCATCCTTCTTAGCAGGGGGAGTGTGGCCATTAGTTGTGCTTAAC CTGTATATGTCTTGTAGAATCAATACAAAATTTTCAGTTGAGTTCAGTTGGTAAATATTTGTGT GACCTCGTGTGAGTCCATCAATTGAGCTGGGTATGTCTCCTTAGTTAATCCTGGTGACTGGTGT GTTCTTGATCTGTAGTCAAAGGTGCCGCCTACCTTAAAAAGGAGGTGATGATATTAGATGTTAA GTATTAATATTGCATTAGGTTGCCAAGTGTATCTAGTTTGCCTTTGAGGTGAGCCAACCTATGG CATTGAATATTTAGTATAGATGCCTGGCAGCAGCTATCTTGTACATAAATTGATCTGCACATAC AATCCTTGTTGCTACTGTCTTTTATTATACTGTAACCTGATGATTTTTATGAGCTGGGCTTTGT CAAGTCCACTGCCATTAACAAGGAACTTGCATGGAGCTCCATCTCTGTGAGGAAAGCTCCCTCA AGTTGCCTGAGGTGCTCCTTATATCCAATCTCTTCTCTTGCCTCTTGTTGGACTTGTATGTGCA TCTTCTGGCTGCTTTAACTCCAATCATGTCACTACTAACTGAATGCAAAAGCAGCTATACCTGT AGGCTGTAAGGAGTAATATTTTTCCTTGGGTAGTGGAGTGTGAAATAATCTGTTTAGATTTTCC TTTTAGATAATTGAATTGTTTGGATAACATCTACGAATTTGAGTGAGCAAAGTTATCTGATTTC TCATCAACTGTGATACTTGAGATTCTCTCGGTTTAAGGTGCAACATGCAGTTTTGAGGAGCATG ATCTGATGATCCTAAAAGAATGGTTAAACCTTTAGAGACATTGATTGGTAATGCTAGACTTTGC AGGTGGTCTAATGCTTTCTTAATTGGCTATGCAGCGTATACCTTTATGCTAGTGTTTCAAATTT TTTTTGTTAAGTGCCTTGATGATTAATGACTAATTAACTGTTATATATAGAGTTATTGTCTATC TCTGAGCACTATGTTTATTCATTATGCAATGCTAGTTATTTGGGGAGTATAAGTAATCTTCTTT GCTGATCATTAATATTTATCTAATACATTATATGCCGTATATTTTGAGTCTTCCGCTTATATTT CCCATAAATTTTATCATGTTCATTAATATTTATCTAATAATTATCATGATTTTTGGCCTTTTTA CAGCCTCCGTCAGAGTTATTAAATAGAAAAAATTTGCAAGGCAACTTGGTTGTTGAGAAATTAG ATAGCCTAATGGTGCTGGCATTTTTGCACCTTGAATCCTGTCAAAGCAGTGGCCGTTTGACTGA GGTAATCCCATCTATAAAATTACACATATTGCGCACACGAGTGCACACAACATATTTTAGAAGT GCATCAACAAGACTTCATAATATTCTAATTGTTATCTTTGATTAGGTATTCGATACTCTACTAG CTTCATTTCAGAGAACCGTATTGAATGCGTACAAGTCAAAATTTACCCAGGTACTGTTTTGCTA ATCATTACTGTTTCTTACTTGTGTTATGTTTCTTGCCAGTACTATTTCTGTGAAATATGTTCTC ATTAGTGGCGTAAATTTTGTTTCAGTATGTGATGTTCTATGCATGTGCACTGGACCCTGAAGGA TGTGGTGTGAAATTTGCCATGGTTCTTGCTGATATGTTTGGATGTGATGTTAATCCCCCTATTA CTAGGTAAATTTTTATTGTTGCATTCAAGAATTATAATTCTACTGAATCCTGATCGATAATGCT AAATAAAATATATAGTTGGAATGGGGCTTATTTATACACTCGTCACACTTGGCATAATTAAATT TACTGCCTGCATTTTTTTTCCATCTGATCAGTGTTGTTAATGGTGGATGGCGGTTCATGGCAGA AAGCAAAAAATCCGCCATATTAAAATATGGCGGATGGTGTAGCGGAAAATGGCGGATGTCATGG TGGACAAAAAAAATATATAATTATATATACATATAAATATTAACAAAACAATAGATAAAAAATA AATATAAATAAAAAATTAAAAAAAAACAATGGATTGCATTCAAATAAATTAAAAAAGTTTCATG AGTTCACATAATAACCAAGTACCAGCACCAAATAAACTCATTCAAGAGTTCAAAATAACAAAAG GATAAAAGCATAAAAAACAGAAAAACGGGTGTAAAACAGAAAAATATCATAAAAAAGGGCTGAA CAGAAAAAAAAAGCAGAAGCAAAAATAAAAGGGGTGTCAAACAGAAAAATATCATAAAAAAAGG GCTGAACAGAAAAGAAAGGGGTGAACAGAAAAAAAGGGGTGTCAAACAGAAAAAAACAGAACAA AAACAAGCAAAAAAAAGGAAAACAAAAACAGAATCACGTTGCCGTCCGTTGCAGACTGTAGCGC CATTGCCGTCGCTGTTTGCCGTGTGCGTGGTGTGTGCCCGCATGCGTGGTGTGCTGTTGCTCGT CGAGTTGTCGCTGCTGGGTCGTGTGGGGGGAACACGGGGTCGTCGCTGCTGGGCTGCGTTCTGC ATGCGGGTTCGCGGCTCGGTCGCGTGGGAGGGGCTGCGTTCTGTGCTGTCCATTGTGGTAGGGC TGCGCCATGCCACCATGACCACGAAAAAAAAACCCTATAATCCGCTATTTTCCGCCATGCCACC ATGACCGCCATGACGCCGCCATTTGCAACCCGTCACGCCACCGCTATTTGGTGGCATTTTTTCA AAAATTCACCACGCCTTTCCGCCATGGCCACCATTTGACAACACTGCATCTGATCATGTCTGTA ACTTGGTCATCAATAATTTGAGTTACAGTGATGCCGAACTGTTTGTCCTCGGTTAATGCCGCAA TGAGCATGATAATTTTTTTTTTCCAACCAATTTCAAATGTAACTTATGGCATTGGTAATTGTAT TCATTCATTCTTTGCAGGATGAGTGCTGCTGCTTATCTTGCTAGTTATTTGACTCGTGCAAAGT TCCTTTCAGCTGCATTGGTCACTAACATCATACAAAGGTTTGGAAACATTTTAAATGCCCACTA TCCATTTATGATCAAATGTTTTATTTTGTAAGAAAAGCACAATTTTATAAATTGATTTTATGAT CTTTGGTTGAAATTTCAGCTTGGTTGATTGGTGTTATGCATATTGCAAGTTACGTGATTTTGAT ATGAACCCACGAGCACATCAAGTTTTTTATTCTGGGTGCCAGGTGAGCCTTGTCAGATTTTTAA TTGGTGATCTGGGGGTGGGGGGATGGGGGGGCTGTAAGTATGATGCCTTTTCATTATTTCTGAC AAGGGAATGAAAGTAATGCAACTACTTTTGAACATCACCCCCATCACCATTTATATTGAATTAT TGATGGATTATTGATTGACGAAGTCATCAATAGAATTCATTGATTTTGCCGTCTTAAATCTGGT GGAAACACTGGTTATTTCTATGAACTGCAAAAATTATCTATATTCTTGCAGAATATTGATTTTG TTCGTTATGTTTTTTTGGTGTGAGCAGGCCATTATGTATATTCTGTGTTTTCGCATGAGATCTT TGATGGATATTCCTAGGCTTAAATTGCAGCTGCTTAATATGCCCATGGAGGCAATCTTGAAACA TAAATTGAGTCCCTTGAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.025779105

Conservation Information
Conserved circRNAs	NA
PMCS	0.025779105

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							25035699-25040376(+)
25035933-25039941(-)
						
						Potential amino acid sequence
						
							MYVENMLRLESGAIGETVGSIMLPALVDRLLELDVEIGWDGILQEDAKGIFEMELEDVTEFADE
DENCDSMPPSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQSSGRLTEVFDTLLASFQRTVLN
AYKSKFTQYVMFYACALDPEGCGVKFAMVLADMFGCDVNPPITRMSAAAYLASYLTRAKFLSAA
LVTNIIQSLVDWCYAYCKLRDFDMNPRAHQVFYSGCQAIMYILCFRMRSLMDIPRLKLQLLNMP
MEAILKHKLSPLKEIVMYVENMLRLESGAIGETVGSIMLPALVDRLLELDVEIGWDGILQEDAK
GIFEMELEDVTEFADEDENCDSMPPSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQSSGRLT
EVFDTLLASFQRTVLNAYKSKFTQYVMFYACALDPEGCGVKFAMVLADMFGCDVNPPITRMSAA
AYLASYLTRAKFLSAALVTNIIQSLVDWCYAYCKLRDFDMNPRAHQVFYSGCQAIMYILCFRMR
SLMDIPRLKLQLLNMPMEAILKHKLSPLKEIVMYVENMLRLESGAIGETVGSIMLPALVDRLLE
LDVEIGWDGILQEDAKGIFEMELEDVTEFADEDENCDSMPPSELLNRKNLQGNLVVEKLDSLMV
LAFLHLESCQSSGRLTEVFDTLLASFQRTVLNAYKSKFTQYVMFYACALDPEGCGVKFAMVLAD
MFGCDVNPPITRMSAAAYLASYLTRAKFLSAALVTNIIQSLVDWCYAYCKLRDFDMNPRAHQVF
YSGCQAIMYILCFRMRSLMDIPRLKLQLLNMPMEAILKHKLSPLKEIVMYVENMLRLESGAIGE
TVGSIMLPALVDRLLELDVEIGWDGILQEDAKGIFEMELEDVTEFADEDENCDSMPPSELLNRK
NLQGNLVVEKLDSLMVLAFLHLESCQSSGRLTEVFDTLLASFQRTVLNAYKSKFTQYVMFYACA
LDPEGCGVKFAMVLADMFGCDVNPPITRMSAAAYLASYLTRAKFLSAALVTNIIQSLVDWCYAY
CKLRDFDMNPRAHQVFYSGCQAIMYILCFRMRSLMDIPRLKLQLLNMPMEAILKHKLSPLK(+)
MPLASSCRIPSHPISTSNSSNLSTRAGSIIEPTVSPIAPLSSLNIFSTYMTISFKGLNLCFKIA
SMGILSSCNLSLGISIKDLMRKHRIYIMAWHPE*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	25035699-25040376(+) 25035933-25039941(-)
Potential amino acid sequence	MYVENMLRLESGAIGETVGSIMLPALVDRLLELDVEIGWDGILQEDAKGIFEMELEDVTEFADE DENCDSMPPSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQSSGRLTEVFDTLLASFQRTVLN AYKSKFTQYVMFYACALDPEGCGVKFAMVLADMFGCDVNPPITRMSAAAYLASYLTRAKFLSAA LVTNIIQSLVDWCYAYCKLRDFDMNPRAHQVFYSGCQAIMYILCFRMRSLMDIPRLKLQLLNMP MEAILKHKLSPLKEIVMYVENMLRLESGAIGETVGSIMLPALVDRLLELDVEIGWDGILQEDAK GIFEMELEDVTEFADEDENCDSMPPSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQSSGRLT EVFDTLLASFQRTVLNAYKSKFTQYVMFYACALDPEGCGVKFAMVLADMFGCDVNPPITRMSAA AYLASYLTRAKFLSAALVTNIIQSLVDWCYAYCKLRDFDMNPRAHQVFYSGCQAIMYILCFRMR SLMDIPRLKLQLLNMPMEAILKHKLSPLKEIVMYVENMLRLESGAIGETVGSIMLPALVDRLLE LDVEIGWDGILQEDAKGIFEMELEDVTEFADEDENCDSMPPSELLNRKNLQGNLVVEKLDSLMV LAFLHLESCQSSGRLTEVFDTLLASFQRTVLNAYKSKFTQYVMFYACALDPEGCGVKFAMVLAD MFGCDVNPPITRMSAAAYLASYLTRAKFLSAALVTNIIQSLVDWCYAYCKLRDFDMNPRAHQVF YSGCQAIMYILCFRMRSLMDIPRLKLQLLNMPMEAILKHKLSPLKEIVMYVENMLRLESGAIGE TVGSIMLPALVDRLLELDVEIGWDGILQEDAKGIFEMELEDVTEFADEDENCDSMPPSELLNRK NLQGNLVVEKLDSLMVLAFLHLESCQSSGRLTEVFDTLLASFQRTVLNAYKSKFTQYVMFYACA LDPEGCGVKFAMVLADMFGCDVNPPITRMSAAAYLASYLTRAKFLSAALVTNIIQSLVDWCYAY CKLRDFDMNPRAHQVFYSGCQAIMYILCFRMRSLMDIPRLKLQLLNMPMEAILKHKLSPLK(+) MPLASSCRIPSHPISTSNSSNLSTRAGSIIEPTVSPIAPLSSLNIFSTYMTISFKGLNLCFKIA SMGILSSCNLSLGISIKDLMRKHRIYIMAWHPE*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chen et al., 2018

circRNA

Detail information of GLYMA_16G112800_circ_g.1

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