Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | 1_circ_ag.14 |
ID in PlantcircBase | ath_circ_003717 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 7390503-7395630 JBrowse» |
Reference genome | TAIR10.38 |
Type | ag-circRNA |
Identification method | CIRI, find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | 1_circ_ag.8 1_circ_ag.9 1_circ_ag.10 1_circ_ag.11 1_circ_ag.12 1_circ_ag.13 1_circ_ag.15 1_circ_ag.16 1_circ_ag.17 |
Support reads | 63 |
Tissues | root, whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | NA |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.638735166 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017 |