Plant Circular RNA Database

Detail information of Os03g0180300_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os03g0180300_circ_g.3
					
						ID in PlantcircBase
						osa_circ_018205
					
						Alias
						Os03circ04984/Os_ciR307
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 4205500-4206307  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer, PcircRNA_finder, SMALT, Segemehl, find_circ
					
						Parent gene
						
							Os03g0180300						
					
						Parent gene annotation
						
							Similar to Ataxin-2 C-terminal region family protein, expressed.
 (Os03t0180300-01);Similar to Ataxin-2 C-terminal region family 
protein, expressed. (Os03t0180300-02);Hypothetical conserved gen
e. (Os03t0180300-03);Hypothetical conserved gene. (Os03t0180300-
04)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os03g0180300_circ_g.4 Os03g0180300_circ_g.5 						
					
						Support reads
						24/129/48
					
						Tissues
						leaf and panicle/root/shoot, root, seed
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0180300-01:2
Os03t0180300-02:2

General Information
CircRNA Name	Os03g0180300_circ_g.3
ID in PlantcircBase	osa_circ_018205
Alias	Os03circ04984/Os_ciR307
Organism	Oryza sativa
Position	chr3: 4205500-4206307 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ue-circRNA
Identification method	CIRCexplorer, PcircRNA_finder, SMALT, Segemehl, find_circ
Parent gene	Os03g0180300
Parent gene annotation	Similar to Ataxin-2 C-terminal region family protein, expressed. (Os03t0180300-01);Similar to Ataxin-2 C-terminal region family protein, expressed. (Os03t0180300-02);Hypothetical conserved gen e. (Os03t0180300-03);Hypothetical conserved gene. (Os03t0180300- 04)
Parent gene strand	+
Alternative splicing	Os03g0180300_circ_g.4 Os03g0180300_circ_g.5
Support reads	24/129/48
Tissues	leaf and panicle/root/shoot, root, seed
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0180300-01:2 Os03t0180300-02:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							Yes							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							F: CAGTGCAAAACCTTACTGATGC
 R: GTCCCAGAACTTTGAAATCAGG
PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	Yes Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	F: CAGTGCAAAACCTTACTGATGC R: GTCCCAGAACTTTGAAATCAGG PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTTAGAATTTTCAGGAGCTCCAGTGCAAAACCTTACTGATGCATACTTCGGAAGCAGGCGCAGC
TTTAGCTCAACTATGGATATCATGAGTCAGCTGGAGgaataggaagaatatctccagcaagact
ttcatctgcttatcatcagtatgtccatcgaagagagaacattaagtttgataaacaagaccac
tgcgttaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 118
Transcript exons: 4205500-4205586,4206277-4206307
GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA
GAACATTAAGTTTGATAAACAAGCTCAACTATGGATATCATGAGTCAGCTGGAG
Transcript length: 156
Transcript exons: 4205500-4205613,4206266-4206307
GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA
GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAACGCAGCTTTAGCTC
AACTATGGATATCATGAGTCAGCTGGAG
Transcript length: 157
Transcript exons: 4205500-4205601,4206253-4206307
GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA
GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCTTCGGAAGCAGGCGCAGCTTTAGCT
CAACTATGGATATCATGAGTCAGCTGGAG
Transcript length: 186
Transcript exons: 4205500-4205620,4206243-4206307
GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA
GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGCTGATGC
ATACTTCGGAAGCAGGCGCAGCTTTAGCTCAACTATGGATATCATGAGTCAGCTGGAG
Transcript length: 197
Transcript exons: 4205500-4205620,4206232-4206307
GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA
GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGGCAAAAC
CTTACTGATGCATACTTCGGAAGCAGGCGCAGCTTTAGCTCAACTATGGATATCATGAGTCAGC
TGGAG
Transcript length: 204
Transcript exons: 4205500-4205620,4206225-4206307
GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA
GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGCTCCAGT
GCAAAACCTTACTGATGCATACTTCGGAAGCAGGCGCAGCTTTAGCTCAACTATGGATATCATG
AGTCAGCTGGAG
Transcript length: 217
Transcript exons: 4205500-4205665,4206257-4206307
GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA
GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGTACCTTC
ATCCCTCAGATCTATCAATGATGTTTCAAATAGATCAGGGAAGCAGGCGCAGCTTTAGCTCAAC
TATGGATATCATGAGTCAGCTGGAG
Transcript length: 242
Transcript exons: 4205500-4205667,4206234-4206307
GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA
GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGTACCTTC
ATCCCTCAGATCTATCAATGATGTTTCAAATAGATCAGACAAAACCTTACTGATGCATACTTCG
GAAGCAGGCGCAGCTTTAGCTCAACTATGGATATCATGAGTCAGCTGGAG
Transcript length: 256
Transcript exons: 4205500-4205713,4206266-4206307
GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA
GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGTACCTTC
ATCCCTCAGATCTATCAATGATGTTTCAAATAGATCAGACACATCCAGGATTTCTGTATCAGGA
TCCTCCAAAGACACTATTGCAGCGCAGCTTTAGCTCAACTATGGATATCATGAGTCAGCTGGAG
Transcript length: 266
Transcript exons: 4205500-4205558,4205567-4205705,4206240-4206307
GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGACATTA
AGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGTACCTTCATCCCTCA
GATCTATCAATGATGTTTCAAATAGATCAGACACATCCAGGATTTCTGTATCAGGATCCTCCAA
AGACACTTACTGATGCATACTTCGGAAGCAGGCGCAGCTTTAGCTCAACTATGGATATCATGAG
TCAGCTGGAG
Transcript length: 266
Transcript exons: 4205500-4205713,4206256-4206307
GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA
GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGTACCTTC
ATCCCTCAGATCTATCAATGATGTTTCAAATAGATCAGACACATCCAGGATTTCTGTATCAGGA
TCCTCCAAAGACACTATTGCAGCGGAAGCAGGCGCAGCTTTAGCTCAACTATGGATATCATGAG
TCAGCTGGAG
Transcript length: 276
Transcript exons: 4205500-4205586,4205601-4205701,4206220-4206307
GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA
GAACATTAAGTTTGATAAACAAGTCCAAATGCACAAGAATTTGTACCTTCATCCCTCAGATCTA
TCAATGATGTTTCAAATAGATCAGACACATCCAGGATTTCTGTATCAGGATCCTCCAAAGAGGA
GCTCCAGTGCAAAACCTTACTGATGCATACTTCGGAAGCAGGCGCAGCTTTAGCTCAACTATGG
ATATCATGAGTCAGCTGGAG
Transcript length: 732
Transcript exons: 4205500-4206145,4206222-4206307
GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA
GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGTACCTTC
ATCCCTCAGATCTATCAATGATGTTTCAAATAGATCAGACACATCCAGGATTTCTGTATCAGGA
TCCTCCAAAGACACTATTGCAGATCAACAAGATCCTGTTATACCAAGTAACCCTGATGAAGAAG
CACATCGGTACTGGCAAGAACAGCTTCCAGATGATATTACCCCTGATTTCAAAGTTCTGGGACA
AGATGAGATGCCTGGACCTGATAATATTTCACTCACTGGCTTGTCAATAAATGATAGCATTGGT
GCTTCACTATTTTCTCCAAACCAGACATCGAATTTGCAACACCGTGCTTCTCCTTTTATTAGGG
ACACTCTGAGCACACGATCAAAGATCGAGTTTCCTAGCCCAACTTATGTAGAAGAACAGTCAAG
AGCTACTATTATGAGTCCAACTGCAAGCGCTATGAGTCCAACTGCGGCTCCGTGGGTAAAAACA
GTAAGAAATGGTGTGCAATACAATGCAAACAGAAGGGATGCCAGCCATTACAATGGAGATTCTA
GCATTGGAGCTCCAGTGCAAAACCTTACTGATGCATACTTCGGAAGCAGGCGCAGCTTTAGCTC
AACTATGGATATCATGAGTCAGCTGGAG
						
					

						Genomic sequence
						
							GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA
GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGTACCTTC
ATCCCTCAGATCTATCAATGATGTTTCAAATAGATCAGACACATCCAGGATTTCTGTATCAGGA
TCCTCCAAAGACACTATTGCAGATCAACAAGATCCTGTTATACCAAGTAACCCTGATGAAGAAG
CACATCGGTACTGGCAAGAACAGCTTCCAGATGATATTACCCCTGATTTCAAAGTTCTGGGACA
AGATGAGATGCCTGGACCTGATAATATTTCACTCACTGGCTTGTCAATAAATGATAGCATTGGT
GCTTCACTATTTTCTCCAAACCAGACATCGAATTTGCAACACCGTGCTTCTCCTTTTATTAGGG
ACACTCTGAGCACACGATCAAAGATCGAGTTTCCTAGCCCAACTTATGTAGAAGAACAGTCAAG
AGCTACTATTATGAGTCCAACTGCAAGCGCTATGAGTCCAACTGCGGCTCCGTGGGTAAAAACA
GTAAGAAATGGTGTGCAATACAATGCAAACAGAAGGGATGCCAGCCATTACAATGGAGATTCTA
GCATTGGTATAGTGTTGATTTCATGGGTGTAATTTTATTCACTGAAGGTAGTAGTATGAACCCT
AACCTTTAGAATTTTCAGGAGCTCCAGTGCAAAACCTTACTGATGCATACTTCGGAAGCAGGCG
CAGCTTTAGCTCAACTATGGATATCATGAGTCAGCTGGAG
						
					

			
		

Sequences
Splice junction sequence	TTTAGAATTTTCAGGAGCTCCAGTGCAAAACCTTACTGATGCATACTTCGGAAGCAGGCGCAGC TTTAGCTCAACTATGGATATCATGAGTCAGCTGGAGgaataggaagaatatctccagcaagact ttcatctgcttatcatcagtatgtccatcgaagagagaacattaagtttgataaacaagaccac tgcgttaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 118 Transcript exons: 4205500-4205586,4206277-4206307 GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA GAACATTAAGTTTGATAAACAAGCTCAACTATGGATATCATGAGTCAGCTGGAG Transcript length: 156 Transcript exons: 4205500-4205613,4206266-4206307 GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAACGCAGCTTTAGCTC AACTATGGATATCATGAGTCAGCTGGAG Transcript length: 157 Transcript exons: 4205500-4205601,4206253-4206307 GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCTTCGGAAGCAGGCGCAGCTTTAGCT CAACTATGGATATCATGAGTCAGCTGGAG Transcript length: 186 Transcript exons: 4205500-4205620,4206243-4206307 GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGCTGATGC ATACTTCGGAAGCAGGCGCAGCTTTAGCTCAACTATGGATATCATGAGTCAGCTGGAG Transcript length: 197 Transcript exons: 4205500-4205620,4206232-4206307 GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGGCAAAAC CTTACTGATGCATACTTCGGAAGCAGGCGCAGCTTTAGCTCAACTATGGATATCATGAGTCAGC TGGAG Transcript length: 204 Transcript exons: 4205500-4205620,4206225-4206307 GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGCTCCAGT GCAAAACCTTACTGATGCATACTTCGGAAGCAGGCGCAGCTTTAGCTCAACTATGGATATCATG AGTCAGCTGGAG Transcript length: 217 Transcript exons: 4205500-4205665,4206257-4206307 GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGTACCTTC ATCCCTCAGATCTATCAATGATGTTTCAAATAGATCAGGGAAGCAGGCGCAGCTTTAGCTCAAC TATGGATATCATGAGTCAGCTGGAG Transcript length: 242 Transcript exons: 4205500-4205667,4206234-4206307 GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGTACCTTC ATCCCTCAGATCTATCAATGATGTTTCAAATAGATCAGACAAAACCTTACTGATGCATACTTCG GAAGCAGGCGCAGCTTTAGCTCAACTATGGATATCATGAGTCAGCTGGAG Transcript length: 256 Transcript exons: 4205500-4205713,4206266-4206307 GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGTACCTTC ATCCCTCAGATCTATCAATGATGTTTCAAATAGATCAGACACATCCAGGATTTCTGTATCAGGA TCCTCCAAAGACACTATTGCAGCGCAGCTTTAGCTCAACTATGGATATCATGAGTCAGCTGGAG Transcript length: 266 Transcript exons: 4205500-4205558,4205567-4205705,4206240-4206307 GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGACATTA AGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGTACCTTCATCCCTCA GATCTATCAATGATGTTTCAAATAGATCAGACACATCCAGGATTTCTGTATCAGGATCCTCCAA AGACACTTACTGATGCATACTTCGGAAGCAGGCGCAGCTTTAGCTCAACTATGGATATCATGAG TCAGCTGGAG Transcript length: 266 Transcript exons: 4205500-4205713,4206256-4206307 GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGTACCTTC ATCCCTCAGATCTATCAATGATGTTTCAAATAGATCAGACACATCCAGGATTTCTGTATCAGGA TCCTCCAAAGACACTATTGCAGCGGAAGCAGGCGCAGCTTTAGCTCAACTATGGATATCATGAG TCAGCTGGAG Transcript length: 276 Transcript exons: 4205500-4205586,4205601-4205701,4206220-4206307 GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA GAACATTAAGTTTGATAAACAAGTCCAAATGCACAAGAATTTGTACCTTCATCCCTCAGATCTA TCAATGATGTTTCAAATAGATCAGACACATCCAGGATTTCTGTATCAGGATCCTCCAAAGAGGA GCTCCAGTGCAAAACCTTACTGATGCATACTTCGGAAGCAGGCGCAGCTTTAGCTCAACTATGG ATATCATGAGTCAGCTGGAG Transcript length: 732 Transcript exons: 4205500-4206145,4206222-4206307 GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGTACCTTC ATCCCTCAGATCTATCAATGATGTTTCAAATAGATCAGACACATCCAGGATTTCTGTATCAGGA TCCTCCAAAGACACTATTGCAGATCAACAAGATCCTGTTATACCAAGTAACCCTGATGAAGAAG CACATCGGTACTGGCAAGAACAGCTTCCAGATGATATTACCCCTGATTTCAAAGTTCTGGGACA AGATGAGATGCCTGGACCTGATAATATTTCACTCACTGGCTTGTCAATAAATGATAGCATTGGT GCTTCACTATTTTCTCCAAACCAGACATCGAATTTGCAACACCGTGCTTCTCCTTTTATTAGGG ACACTCTGAGCACACGATCAAAGATCGAGTTTCCTAGCCCAACTTATGTAGAAGAACAGTCAAG AGCTACTATTATGAGTCCAACTGCAAGCGCTATGAGTCCAACTGCGGCTCCGTGGGTAAAAACA GTAAGAAATGGTGTGCAATACAATGCAAACAGAAGGGATGCCAGCCATTACAATGGAGATTCTA GCATTGGAGCTCCAGTGCAAAACCTTACTGATGCATACTTCGGAAGCAGGCGCAGCTTTAGCTC AACTATGGATATCATGAGTCAGCTGGAG
Genomic sequence	GAATAGGAAGAATATCTCCAGCAAGACTTTCATCTGCTTATCATCAGTATGTCCATCGAAGAGA GAACATTAAGTTTGATAAACAAGACCACTGCGTTAAATCCAAATGCACAAGAATTTGTACCTTC ATCCCTCAGATCTATCAATGATGTTTCAAATAGATCAGACACATCCAGGATTTCTGTATCAGGA TCCTCCAAAGACACTATTGCAGATCAACAAGATCCTGTTATACCAAGTAACCCTGATGAAGAAG CACATCGGTACTGGCAAGAACAGCTTCCAGATGATATTACCCCTGATTTCAAAGTTCTGGGACA AGATGAGATGCCTGGACCTGATAATATTTCACTCACTGGCTTGTCAATAAATGATAGCATTGGT GCTTCACTATTTTCTCCAAACCAGACATCGAATTTGCAACACCGTGCTTCTCCTTTTATTAGGG ACACTCTGAGCACACGATCAAAGATCGAGTTTCCTAGCCCAACTTATGTAGAAGAACAGTCAAG AGCTACTATTATGAGTCCAACTGCAAGCGCTATGAGTCCAACTGCGGCTCCGTGGGTAAAAACA GTAAGAAATGGTGTGCAATACAATGCAAACAGAAGGGATGCCAGCCATTACAATGGAGATTCTA GCATTGGTATAGTGTTGATTTCATGGGTGTAATTTTATTCACTGAAGGTAGTAGTATGAACCCT AACCTTTAGAATTTTCAGGAGCTCCAGTGCAAAACCTTACTGATGCATACTTCGGAAGCAGGCG CAGCTTTAGCTCAACTATGGATATCATGAGTCAGCTGGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_004578* osi_circ_013948 osi_circ_013949 osi_circ_004579* 
						
						PMCS
						0.740011822

Conservation Information
Conserved circRNAs	osi_circ_004578* osi_circ_013948 osi_circ_013949 osi_circ_004579*
PMCS	0.740011822

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							4205549-4205502(+)
4205534-4206280(-)
						
						Potential amino acid sequence
						
							MSIEERTLSLINKTTALNPNAQEFVPSSLRSINDVSNRSDTSRISVSGSSKDTIADQQDPVIPS
NPDEEAHRYWQEQLPDDITPDFKVLGQDEMPGPDNISLTGLSINDSIGASLFSPNQTSNLQHRA
SPFIRDTLSTRSKIEFPSPTYVEEQSRATIMSPTASAMSPTAAPWVKTVRNGVQYNANRRDASH
YNGDSSIGAPVQNLTDAYFGSRRSFSSTMDIMSQLEE*(+)
MKVLLEIFFLFLQLTHDIHS*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	4205549-4205502(+) 4205534-4206280(-)
Potential amino acid sequence	MSIEERTLSLINKTTALNPNAQEFVPSSLRSINDVSNRSDTSRISVSGSSKDTIADQQDPVIPS NPDEEAHRYWQEQLPDDITPDFKVLGQDEMPGPDNISLTGLSINDSIGASLFSPNQTSNLQHRA SPFIRDTLSTRSKIEFPSPTYVEEQSRATIMSPTASAMSPTAAPWVKTVRNGVQYNANRRDASH YNGDSSIGAPVQNLTDAYFGSRRSFSSTMDIMSQLEE(+) MKVLLEIFFLFLQLTHDIHS(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os03g0180300_circ_g.3

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