Plant Circular RNA Database

Detail information of Os06g0488200_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os06g0488200_circ_g.1
					
						ID in PlantcircBase
						osa_circ_030904
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr6: 16774608-16778831  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os06g0488200						
					
						Parent gene annotation
						
							Similar to Myosin heavy chain (Fragment). (Os06t0488200-01);Simi
lar to XIC (Myosin-like protein XIC); motor/ protein binding. (O
s06t0488200-02)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os06g0488200_circ_g.2 Os06g0488200_circ_g.3 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os06t0488200-02:14
Os06t0488200-01:17

General Information
CircRNA Name	Os06g0488200_circ_g.1
ID in PlantcircBase	osa_circ_030904
Alias	NA
Organism	Oryza sativa
Position	chr6: 16774608-16778831 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os06g0488200
Parent gene annotation	Similar to Myosin heavy chain (Fragment). (Os06t0488200-01);Simi lar to XIC (Myosin-like protein XIC); motor/ protein binding. (O s06t0488200-02)
Parent gene strand	+
Alternative splicing	Os06g0488200_circ_g.2 Os06g0488200_circ_g.3
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os06t0488200-02:14 Os06t0488200-01:17

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGGCAATCAGGATCAGCTGTGCAGGTTATCCTACACGTCGCACATTTTATGAGTTTTTGCATCG
CTTTGGAATACTTGCTCAAGAGGCCCTTGAAGGAAAgggacgaaagttaatattatagtaggtt
ctcatgtttgggctgaagaccctgaaattgcctgggtcgatggagaagttgttaagatcaaagg
tgaagagg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2069
Transcript exons: 16774608-16774736,16774810-16774953,16775038-16775183,16
775282-16775438,16775536-16775594,16775727-16775886,1677
5994-16776143,16776238-16776374,16776470-16776616,167767
01-16776802,16776887-16776944,16777040-16777141,16777874
-16777911,16778013-16778139,16778220-16778390,16778479-1
6778610,16778722-16778831
GGGACGAAAGTTAATATTATAGTAGGTTCTCATGTTTGGGCTGAAGACCCTGAAATTGCCTGGG
TCGATGGAGAAGTTGTTAAGATCAAAGGTGAAGAGGCCGAGATCCAAGCAACCAATGGAAAGAC
GATCACCGCAAATTTGTCGAAACTGTATCCTAAAGATATGGAAGCAGCTGCTGGTGGAGTTGAT
GATATGACAAAGCTATCCTACCTCCATGAGCCAGGAGTTCTGCAGAATTTGGCAACCAGATATG
AACTTAATGAAATATATACATATACGGGAAACATTCTCATCGCCGTCAATCCTTTCCAAAGATT
GCCACATTTGTATGATCCACATATGATGCAACAGTACAAGGGAGCACCATTTGGAGAGTTAAGT
CCACATGTTTTCGCTGTGGCAGATGTTGCATACAGAGCAATGATTCATGAAGGGAAAAGCAACT
CTATTCTTGTGAGTGGTGAGAGCGGTGCAGGTAAAACAGAAACAACAAAAATGCTTATGAGATA
TCTTGCCTATTTGGGTGGCCGAGCTGCTACCGAGGGAAGAACAGTAGAGCAACAAGTTCTCGAA
TCAAATCCAGTCCTTGAAGCTTTTGGCAATGCTAAAACTGTCAGAAACAACAATTCTAGTCGGT
TTGGTAAGTTTGTTGAGATTCAGTTTGATAAGCAAGGGAGGATCTCAGGTGCTGCTGTGAGAAC
TTACTTGCTAGAAAGGTCACGGGTGTGCCAAATTTCTGATCCTGAACGCAACTACCACTGCTTC
TATCTCCTTTGTGCCGCACCACAGGAGGAGGTTGAGAAGTACAAATTAGGAAATCCTAAGACTT
TTCATTATCTTAATCAATCAAATTGCTACGAGTTGGTTGGGGTTAGTGATGCTCATGAATACTT
GGCTACCAGAAGAGCAATGGATATTGTTGGCATCAGTACTCAGGAACAGGATGCTATTTTCAGG
GTTGTTGCAGCTATCCTTCATATCGGTAACATTGAGTTTGCCAAGGGCAAAGAAGTCGATTCCT
CAGTTTTGAAAGATGACAAATCTAAGTTCCACCTTGACACAACTGCTGAGCTTCTTATGTGTGA
TTCTGGAGCCTTGGGAGATGCTCTTTGCAAGCGTGTCATGGTAACACCAGAGGAGGTTATAAAA
AGGAGCCTTGATCCTTACAATGCAACTGTCAGCAGGGACGGTCTAGCTAAGACAATATATTCCC
GCTTGTTTGACTGGCTTGTTGATAAAATAAACAGCTCAATTGGACAAGATCCTAACTCTAAATC
TCTTATTGGTGTCTTGGATATCTATGGTTTTGAGAGCTTCAAGTTGAACAGTTTTGAACAATTC
TGTATTAATTATACAAATGAAAAATTGCAACAACATTTCAATCAGCACGTTTTCAAGATGGAAC
AGGAAGAGTATACCAAAGAACAAATTGATTGGAGCTATATTGAGTTTGTTGATAATCAGGATGT
TCTTGACCTTATTGAGAAGAAACCTGGTGGTGTTATTGCACTTCTAGATGAGGCATGTATGTTT
CCTAAGTCAACACATGAGACTTTTTCCCAGAAGCTGTACCAGACATTTCAAAAGCACAAACGGT
TTGTCAAACCAAAGCTATCTCGCACAGATTTTACAATCTGTCACTACGCTGGAGAGGTGTTGTA
TCAATCTGACCAATTCCTTGATAAAAACAAAGACTATGTTGTGGCCGAGCACCAGGAGTTACTA
AGCGCTTCCAAATGCTCGTTTATCTCTGGACTTTTTCCTCCTCTGCCAGAGGAAACATCCAAAT
CCTCCAAGTTCTCTTCGATTGGAGCACGCTTCAAGCAACAACTTCAAGCTCTTATGGAAACACT
AAACTCTACAGAACCTCATTATATCAGATGTGTCAAGCCAAACAATGTGCTAAAACCGGCGATT
TTTGAGAATGTCAATGTCATGCAACAGTTGCGTTGTGGTGGTGTACTTGAGGCAATCAGGATCA
GCTGTGCAGGTTATCCTACACGTCGCACATTTTATGAGTTTTTGCATCGCTTTGGAATACTTGC
TCAAGAGGCCCTTGAAGGAAA
						
					

						Genomic sequence
						
							GGGACGAAAGTTAATATTATAGTAGGTTCTCATGTTTGGGCTGAAGACCCTGAAATTGCCTGGG
TCGATGGAGAAGTTGTTAAGATCAAAGGTGAAGAGGCCGAGATCCAAGCAACCAATGGAAAGAC
GGTAAGCCGCTAATTCGTTTTCGGCCTTCAGTTTGATGTACTGCTACTTATGTTTGTGCTGTCA
ATTCTTTTAGATCACCGCAAATTTGTCGAAACTGTATCCTAAAGATATGGAAGCAGCTGCTGGT
GGAGTTGATGATATGACAAAGCTATCCTACCTCCATGAGCCAGGAGTTCTGCAGAATTTGGCAA
CCAGATATGAACTTAATGAAATATATGTATGTTATTCTGCATGGCCATTTACTATAAATATGCC
ATTGTTTCAGTCGTACTGTATGACCTATAGCTTAACATTTTGACAGACATATACGGGAAACATT
CTCATCGCCGTCAATCCTTTCCAAAGATTGCCACATTTGTATGATCCACATATGATGCAACAGT
ACAAGGGAGCACCATTTGGAGAGTTAAGTCCACATGTTTTCGCTGTGGCAGATGTTGCATACAG
GTAAAGTAAATATGATAGGTGGTATTTGAGTCATCAGTGTTTCTAACTTTCTACTCCTATAAAT
CATGGACCATCCTGCTGTCTTTTACATGAAACAGAGCAATGATTCATGAAGGGAAAAGCAACTC
TATTCTTGTGAGTGGTGAGAGCGGTGCAGGTAAAACAGAAACAACAAAAATGCTTATGAGATAT
CTTGCCTATTTGGGTGGCCGAGCTGCTACCGAGGGAAGAACAGTAGAGCAACAAGTTCTCGAAG
TAAGGAATTGAGTTCTTACCTTTGGAAGGCCATTGTATTATTAAGTTAGTTATATTCCAATTGA
ACTTTTGCTGCATATTCTTTTTATGTCTGCAGTCAAATCCAGTCCTTGAAGCTTTTGGCAATGC
TAAAACTGTCAGAAACAACAATTCTAGGTACGTAAGGGAGATTTAACACAATTGTCTCAATCAT
AAGACTACTTGTATTTCTTCAAATTATAGCTAGAGGTACATATATATATATATATAAATGTTGC
AGTATCATTTCCTCCGTAATTCTTTCTGCAGTCGGTTTGGTAAGTTTGTTGAGATTCAGTTTGA
TAAGCAAGGGAGGATCTCAGGTGCTGCTGTGAGAACTTACTTGCTAGAAAGGTCACGGGTGTGC
CAAATTTCTGATCCTGAACGCAACTACCACTGCTTCTATCTCCTTTGTGCCGCACCACAGGAGG
TAAATGATATCTATTCTCTTTGAACACTTCTCATCCTCATATCTCTGGTGTTATTGCACTAATA
ACTAATACAGACAATTAATATCCTGTGACGTTGAACTTTCAGGAGGTTGAGAAGTACAAATTAG
GAAATCCTAAGACTTTTCATTATCTTAATCAATCAAATTGCTACGAGTTGGTTGGGGTTAGTGA
TGCTCATGAATACTTGGCTACCAGAAGAGCAATGGATATTGTTGGCATCAGTACTCAGGAACAG
GTAGCTCAATTATCTCCATATGCTCTTTCATCTGATCAATGGCTAGTTGAGCTGAACCTTTTTC
TCACTTCTCTGCAATTTAATTTGTTTTCAGGATGCTATTTTCAGGGTTGTTGCAGCTATCCTTC
ATATCGGTAACATTGAGTTTGCCAAGGGCAAAGAAGTCGATTCCTCAGTTTTGAAAGATGACAA
ATCTAAGTTCCACCTTGACACAACTGCTGAGCTTCTTATGTAACGACTGCATTTGGTTCTGTTC
TATATTTATCTGTTGATATTACTTATGTATAACATGTTCCATCAATTGTTGAACTGTATTGCAT
GTGCAGGTGTGATTCTGGAGCCTTGGGAGATGCTCTTTGCAAGCGTGTCATGGTAACACCAGAG
GAGGTTATAAAAAGGAGCCTTGATCCTTACAATGCAACTGTCAGCAGGGACGGTCTAGCTAAGA
CAATATATTCCCGCTTGTTTGACTGGTAATATAACTATGTTCCCAGGAGTAATGCAATACGGAA
AAAGAACCTTGCAGTCATCTTTCTGACTCACCATTATTTGTTCAGGCTTGTTGATAAAATAAAC
AGCTCAATTGGACAAGATCCTAACTCTAAATCTCTTATTGGTGTCTTGGATATCTATGGTTTTG
AGAGCTTCAAGTTGAACAGGTTACCTTTACTGTAGTTTATTCTTGTATGAAAGTTTACTGAGTA
TTTTTTTACAAACTAATGAATTATACTTTGCTTTTGCAGTTTTGAACAATTCTGTATTAATTAT
ACAAATGAAAAATTGCAACAACATTTCAATCAGGTACACTTGTTCACATGGCATGGTTCGTGTA
CACCAAACTCTCTTTCCCGAAGAACATATATTTATATGGAAGATGCCTATGTCTTCTTTTTCAG
CACGTTTTCAAGATGGAACAGGAAGAGTATACCAAAGAACAAATTGATTGGAGCTATATTGAGT
TTGTTGATAATCAGGATGTTCTTGACCTTATTGAGAAGGTATGCATAAGTAGCCAGAATATAGA
GTTCCTTAACATCCCAGTTTCTCGAAAAGTTCTTGGTTAAAATAATTCAGGAAAATTGAAATTT
GCCACGTGTTTGCATTAAATATGTCAAAATTCTTGTTTTCCCCTAATTAACTTCATGATATGTA
TGAAGTCAACAACTCCGCATAAAAGGATCTCTAGATTTGATTTCTCTAATTCCATCTAAGGTGC
ATCAACATTGGACATCTCAAAATGCTGTAGTGTATAAGTTGAATACATGGTCAAACACATTCAG
TAGCACCTATTCTTATTTGAGAAGATTGGAATAGCCAAATAGGTCTATGATTTAGGCAGGACTC
CCTCCATATTTAAATATATGGCATCATTGAATTTATTCGGTCCAACTTTTAAAATCAGTAGGTC
TCCAAATATTTAGTTTGCAAACATCAAAATCATATGGGCAGATTTTTCTTTATAAGACGTTTAC
AATATTATAGTTTTGTTAGATATTATCATTATATTCTAATAGAAAAATACTGGTTAATATTGCA
CACAAAAGATTGATTAATATCAACATTGTCACATATTTAAATAGGGAGGTTCATTCTTTTTCTT
CTACTTGTTTTTGACTAAGTAATATATCCAATAATTTTGTGATGTATTTTCACTTGCTTATTTT
CCATGTGTTTACTGAATTTGTCAATAAACGACATTTAATTAGTTTGTTTAAATTGTCCCTTTAC
AGAAACCTGGTGGTGTTATTGCACTTCTAGATGAGGCATGGTAAGCTTGCCATTTATCTTCTGT
TTGTTCTTGCTGTCTAATCAATTTAATTTCCCTATGTTTAGTTAATCACTATGATTTCTGTTAT
TGTTTTTGCACAGTATGTTTCCTAAGTCAACACATGAGACTTTTTCCCAGAAGCTGTACCAGAC
ATTTCAAAAGCACAAACGGTTTGTCAAACCAAAGCTATCTCGCACAGATTTTACAATCTGTCAC
TACGCTGGAGAGGTTAGATTTTCTCATCGAATTCAATTCTCATGATCGTATCAGTTCTTGTTTT
AACTGGTAGCTATGCTTCCGTTATCCAGGTGTTGTATCAATCTGACCAATTCCTTGATAAAAAC
AAAGACTATGTTGTGGCCGAGCACCAGGAGTTACTAAGCGCTTCCAAATGCTCGTTTATCTCTG
GACTTTTTCCTCCTCTGCCAGAGGAAACATCCAAATCCTCCAAGTTCTCTTCGATTGGAGCACG
CTTCAAGGTTTTTTTTTTGCCTATCTTTTTCCCAGTTTTTAGCCAGTTTGCTATCATGTATAAC
TAACTGCTAACCTGTGGTTTTCATATTGCAGCAACAACTTCAAGCTCTTATGGAAACACTAAAC
TCTACAGAACCTCATTATATCAGATGTGTCAAGCCAAACAATGTGCTAAAACCGGCGATTTTTG
AGAATGTCAATGTCATGCAACAGTTGCGTTGTGGTGTAAGTGCTTCTAAACTATGATTGTATTG
TGCAAACAATCCAACATGTACTACAATCATATAGTGGCTATGTTAGAGTGCATCTAACTTGCAT
GCCATGTATATGCATTAGGGTGTACTTGAGGCAATCAGGATCAGCTGTGCAGGTTATCCTACAC
GTCGCACATTTTATGAGTTTTTGCATCGCTTTGGAATACTTGCTCAAGAGGCCCTTGAAGGAAA
						
					

			
		

Sequences
Splice junction sequence	AGGCAATCAGGATCAGCTGTGCAGGTTATCCTACACGTCGCACATTTTATGAGTTTTTGCATCG CTTTGGAATACTTGCTCAAGAGGCCCTTGAAGGAAAgggacgaaagttaatattatagtaggtt ctcatgtttgggctgaagaccctgaaattgcctgggtcgatggagaagttgttaagatcaaagg tgaagagg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2069 Transcript exons: 16774608-16774736,16774810-16774953,16775038-16775183,16 775282-16775438,16775536-16775594,16775727-16775886,1677 5994-16776143,16776238-16776374,16776470-16776616,167767 01-16776802,16776887-16776944,16777040-16777141,16777874 -16777911,16778013-16778139,16778220-16778390,16778479-1 6778610,16778722-16778831 GGGACGAAAGTTAATATTATAGTAGGTTCTCATGTTTGGGCTGAAGACCCTGAAATTGCCTGGG TCGATGGAGAAGTTGTTAAGATCAAAGGTGAAGAGGCCGAGATCCAAGCAACCAATGGAAAGAC GATCACCGCAAATTTGTCGAAACTGTATCCTAAAGATATGGAAGCAGCTGCTGGTGGAGTTGAT GATATGACAAAGCTATCCTACCTCCATGAGCCAGGAGTTCTGCAGAATTTGGCAACCAGATATG AACTTAATGAAATATATACATATACGGGAAACATTCTCATCGCCGTCAATCCTTTCCAAAGATT GCCACATTTGTATGATCCACATATGATGCAACAGTACAAGGGAGCACCATTTGGAGAGTTAAGT CCACATGTTTTCGCTGTGGCAGATGTTGCATACAGAGCAATGATTCATGAAGGGAAAAGCAACT CTATTCTTGTGAGTGGTGAGAGCGGTGCAGGTAAAACAGAAACAACAAAAATGCTTATGAGATA TCTTGCCTATTTGGGTGGCCGAGCTGCTACCGAGGGAAGAACAGTAGAGCAACAAGTTCTCGAA TCAAATCCAGTCCTTGAAGCTTTTGGCAATGCTAAAACTGTCAGAAACAACAATTCTAGTCGGT TTGGTAAGTTTGTTGAGATTCAGTTTGATAAGCAAGGGAGGATCTCAGGTGCTGCTGTGAGAAC TTACTTGCTAGAAAGGTCACGGGTGTGCCAAATTTCTGATCCTGAACGCAACTACCACTGCTTC TATCTCCTTTGTGCCGCACCACAGGAGGAGGTTGAGAAGTACAAATTAGGAAATCCTAAGACTT TTCATTATCTTAATCAATCAAATTGCTACGAGTTGGTTGGGGTTAGTGATGCTCATGAATACTT GGCTACCAGAAGAGCAATGGATATTGTTGGCATCAGTACTCAGGAACAGGATGCTATTTTCAGG GTTGTTGCAGCTATCCTTCATATCGGTAACATTGAGTTTGCCAAGGGCAAAGAAGTCGATTCCT CAGTTTTGAAAGATGACAAATCTAAGTTCCACCTTGACACAACTGCTGAGCTTCTTATGTGTGA TTCTGGAGCCTTGGGAGATGCTCTTTGCAAGCGTGTCATGGTAACACCAGAGGAGGTTATAAAA AGGAGCCTTGATCCTTACAATGCAACTGTCAGCAGGGACGGTCTAGCTAAGACAATATATTCCC GCTTGTTTGACTGGCTTGTTGATAAAATAAACAGCTCAATTGGACAAGATCCTAACTCTAAATC TCTTATTGGTGTCTTGGATATCTATGGTTTTGAGAGCTTCAAGTTGAACAGTTTTGAACAATTC TGTATTAATTATACAAATGAAAAATTGCAACAACATTTCAATCAGCACGTTTTCAAGATGGAAC AGGAAGAGTATACCAAAGAACAAATTGATTGGAGCTATATTGAGTTTGTTGATAATCAGGATGT TCTTGACCTTATTGAGAAGAAACCTGGTGGTGTTATTGCACTTCTAGATGAGGCATGTATGTTT CCTAAGTCAACACATGAGACTTTTTCCCAGAAGCTGTACCAGACATTTCAAAAGCACAAACGGT TTGTCAAACCAAAGCTATCTCGCACAGATTTTACAATCTGTCACTACGCTGGAGAGGTGTTGTA TCAATCTGACCAATTCCTTGATAAAAACAAAGACTATGTTGTGGCCGAGCACCAGGAGTTACTA AGCGCTTCCAAATGCTCGTTTATCTCTGGACTTTTTCCTCCTCTGCCAGAGGAAACATCCAAAT CCTCCAAGTTCTCTTCGATTGGAGCACGCTTCAAGCAACAACTTCAAGCTCTTATGGAAACACT AAACTCTACAGAACCTCATTATATCAGATGTGTCAAGCCAAACAATGTGCTAAAACCGGCGATT TTTGAGAATGTCAATGTCATGCAACAGTTGCGTTGTGGTGGTGTACTTGAGGCAATCAGGATCA GCTGTGCAGGTTATCCTACACGTCGCACATTTTATGAGTTTTTGCATCGCTTTGGAATACTTGC TCAAGAGGCCCTTGAAGGAAA
Genomic sequence	GGGACGAAAGTTAATATTATAGTAGGTTCTCATGTTTGGGCTGAAGACCCTGAAATTGCCTGGG TCGATGGAGAAGTTGTTAAGATCAAAGGTGAAGAGGCCGAGATCCAAGCAACCAATGGAAAGAC GGTAAGCCGCTAATTCGTTTTCGGCCTTCAGTTTGATGTACTGCTACTTATGTTTGTGCTGTCA ATTCTTTTAGATCACCGCAAATTTGTCGAAACTGTATCCTAAAGATATGGAAGCAGCTGCTGGT GGAGTTGATGATATGACAAAGCTATCCTACCTCCATGAGCCAGGAGTTCTGCAGAATTTGGCAA CCAGATATGAACTTAATGAAATATATGTATGTTATTCTGCATGGCCATTTACTATAAATATGCC ATTGTTTCAGTCGTACTGTATGACCTATAGCTTAACATTTTGACAGACATATACGGGAAACATT CTCATCGCCGTCAATCCTTTCCAAAGATTGCCACATTTGTATGATCCACATATGATGCAACAGT ACAAGGGAGCACCATTTGGAGAGTTAAGTCCACATGTTTTCGCTGTGGCAGATGTTGCATACAG GTAAAGTAAATATGATAGGTGGTATTTGAGTCATCAGTGTTTCTAACTTTCTACTCCTATAAAT CATGGACCATCCTGCTGTCTTTTACATGAAACAGAGCAATGATTCATGAAGGGAAAAGCAACTC TATTCTTGTGAGTGGTGAGAGCGGTGCAGGTAAAACAGAAACAACAAAAATGCTTATGAGATAT CTTGCCTATTTGGGTGGCCGAGCTGCTACCGAGGGAAGAACAGTAGAGCAACAAGTTCTCGAAG TAAGGAATTGAGTTCTTACCTTTGGAAGGCCATTGTATTATTAAGTTAGTTATATTCCAATTGA ACTTTTGCTGCATATTCTTTTTATGTCTGCAGTCAAATCCAGTCCTTGAAGCTTTTGGCAATGC TAAAACTGTCAGAAACAACAATTCTAGGTACGTAAGGGAGATTTAACACAATTGTCTCAATCAT AAGACTACTTGTATTTCTTCAAATTATAGCTAGAGGTACATATATATATATATATAAATGTTGC AGTATCATTTCCTCCGTAATTCTTTCTGCAGTCGGTTTGGTAAGTTTGTTGAGATTCAGTTTGA TAAGCAAGGGAGGATCTCAGGTGCTGCTGTGAGAACTTACTTGCTAGAAAGGTCACGGGTGTGC CAAATTTCTGATCCTGAACGCAACTACCACTGCTTCTATCTCCTTTGTGCCGCACCACAGGAGG TAAATGATATCTATTCTCTTTGAACACTTCTCATCCTCATATCTCTGGTGTTATTGCACTAATA ACTAATACAGACAATTAATATCCTGTGACGTTGAACTTTCAGGAGGTTGAGAAGTACAAATTAG GAAATCCTAAGACTTTTCATTATCTTAATCAATCAAATTGCTACGAGTTGGTTGGGGTTAGTGA TGCTCATGAATACTTGGCTACCAGAAGAGCAATGGATATTGTTGGCATCAGTACTCAGGAACAG GTAGCTCAATTATCTCCATATGCTCTTTCATCTGATCAATGGCTAGTTGAGCTGAACCTTTTTC TCACTTCTCTGCAATTTAATTTGTTTTCAGGATGCTATTTTCAGGGTTGTTGCAGCTATCCTTC ATATCGGTAACATTGAGTTTGCCAAGGGCAAAGAAGTCGATTCCTCAGTTTTGAAAGATGACAA ATCTAAGTTCCACCTTGACACAACTGCTGAGCTTCTTATGTAACGACTGCATTTGGTTCTGTTC TATATTTATCTGTTGATATTACTTATGTATAACATGTTCCATCAATTGTTGAACTGTATTGCAT GTGCAGGTGTGATTCTGGAGCCTTGGGAGATGCTCTTTGCAAGCGTGTCATGGTAACACCAGAG GAGGTTATAAAAAGGAGCCTTGATCCTTACAATGCAACTGTCAGCAGGGACGGTCTAGCTAAGA CAATATATTCCCGCTTGTTTGACTGGTAATATAACTATGTTCCCAGGAGTAATGCAATACGGAA AAAGAACCTTGCAGTCATCTTTCTGACTCACCATTATTTGTTCAGGCTTGTTGATAAAATAAAC AGCTCAATTGGACAAGATCCTAACTCTAAATCTCTTATTGGTGTCTTGGATATCTATGGTTTTG AGAGCTTCAAGTTGAACAGGTTACCTTTACTGTAGTTTATTCTTGTATGAAAGTTTACTGAGTA TTTTTTTACAAACTAATGAATTATACTTTGCTTTTGCAGTTTTGAACAATTCTGTATTAATTAT ACAAATGAAAAATTGCAACAACATTTCAATCAGGTACACTTGTTCACATGGCATGGTTCGTGTA CACCAAACTCTCTTTCCCGAAGAACATATATTTATATGGAAGATGCCTATGTCTTCTTTTTCAG CACGTTTTCAAGATGGAACAGGAAGAGTATACCAAAGAACAAATTGATTGGAGCTATATTGAGT TTGTTGATAATCAGGATGTTCTTGACCTTATTGAGAAGGTATGCATAAGTAGCCAGAATATAGA GTTCCTTAACATCCCAGTTTCTCGAAAAGTTCTTGGTTAAAATAATTCAGGAAAATTGAAATTT GCCACGTGTTTGCATTAAATATGTCAAAATTCTTGTTTTCCCCTAATTAACTTCATGATATGTA TGAAGTCAACAACTCCGCATAAAAGGATCTCTAGATTTGATTTCTCTAATTCCATCTAAGGTGC ATCAACATTGGACATCTCAAAATGCTGTAGTGTATAAGTTGAATACATGGTCAAACACATTCAG TAGCACCTATTCTTATTTGAGAAGATTGGAATAGCCAAATAGGTCTATGATTTAGGCAGGACTC CCTCCATATTTAAATATATGGCATCATTGAATTTATTCGGTCCAACTTTTAAAATCAGTAGGTC TCCAAATATTTAGTTTGCAAACATCAAAATCATATGGGCAGATTTTTCTTTATAAGACGTTTAC AATATTATAGTTTTGTTAGATATTATCATTATATTCTAATAGAAAAATACTGGTTAATATTGCA CACAAAAGATTGATTAATATCAACATTGTCACATATTTAAATAGGGAGGTTCATTCTTTTTCTT CTACTTGTTTTTGACTAAGTAATATATCCAATAATTTTGTGATGTATTTTCACTTGCTTATTTT CCATGTGTTTACTGAATTTGTCAATAAACGACATTTAATTAGTTTGTTTAAATTGTCCCTTTAC AGAAACCTGGTGGTGTTATTGCACTTCTAGATGAGGCATGGTAAGCTTGCCATTTATCTTCTGT TTGTTCTTGCTGTCTAATCAATTTAATTTCCCTATGTTTAGTTAATCACTATGATTTCTGTTAT TGTTTTTGCACAGTATGTTTCCTAAGTCAACACATGAGACTTTTTCCCAGAAGCTGTACCAGAC ATTTCAAAAGCACAAACGGTTTGTCAAACCAAAGCTATCTCGCACAGATTTTACAATCTGTCAC TACGCTGGAGAGGTTAGATTTTCTCATCGAATTCAATTCTCATGATCGTATCAGTTCTTGTTTT AACTGGTAGCTATGCTTCCGTTATCCAGGTGTTGTATCAATCTGACCAATTCCTTGATAAAAAC AAAGACTATGTTGTGGCCGAGCACCAGGAGTTACTAAGCGCTTCCAAATGCTCGTTTATCTCTG GACTTTTTCCTCCTCTGCCAGAGGAAACATCCAAATCCTCCAAGTTCTCTTCGATTGGAGCACG CTTCAAGGTTTTTTTTTTGCCTATCTTTTTCCCAGTTTTTAGCCAGTTTGCTATCATGTATAAC TAACTGCTAACCTGTGGTTTTCATATTGCAGCAACAACTTCAAGCTCTTATGGAAACACTAAAC TCTACAGAACCTCATTATATCAGATGTGTCAAGCCAAACAATGTGCTAAAACCGGCGATTTTTG AGAATGTCAATGTCATGCAACAGTTGCGTTGTGGTGTAAGTGCTTCTAAACTATGATTGTATTG TGCAAACAATCCAACATGTACTACAATCATATAGTGGCTATGTTAGAGTGCATCTAACTTGCAT GCCATGTATATGCATTAGGGTGTACTTGAGGCAATCAGGATCAGCTGTGCAGGTTATCCTACAC GTCGCACATTTTATGAGTTTTTGCATCGCTTTGGAATACTTGCTCAAGAGGCCCTTGAAGGAAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.258349842

Conservation Information
Conserved circRNAs	NA
PMCS	0.258349842

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							16774847-16774626(+)
16778580-16774618(+)
						
						Potential amino acid sequence
						
							MEAAAGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDPHMMQQY
KGAPFGELSPHVFAVADVAYRAMIHEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAATEG
RTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAVRTYLLERSRVCQIS
DPERNYHCFYLLCAAPQEEVEKYKLGNPKTFHYLNQSNCYELVGVSDAHEYLATRRAMDIVGIS
TQEQDAIFRVVAAILHIGNIEFAKGKEVDSSVLKDDKSKFHLDTTAELLMCDSGALGDALCKRV
MVTPEEVIKRSLDPYNATVSRDGLAKTIYSRLFDWLVDKINSSIGQDPNSKSLIGVLDIYGFES
FKLNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTKEQIDWSYIEFVDNQDVLDLIEKKPGGVI
ALLDEACMFPKSTHETFSQKLYQTFQKHKRFVKPKLSRTDFTICHYAGEVLYQSDQFLDKNKDY
VVAEHQELLSASKCSFISGLFPPLPEETSKSSKFSSIGARFKQQLQALMETLNSTEPHYIRCVK
PNNVLKPAIFENVNVMQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGILAQEALEGKGRKLI
L*(+)
MSMSCNSCVVVVYLRQSGSAVQVILHVAHFMSFCIALEYLLKRPLKERDES*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	16774847-16774626(+) 16778580-16774618(+)
Potential amino acid sequence	MEAAAGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDPHMMQQY KGAPFGELSPHVFAVADVAYRAMIHEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAATEG RTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAVRTYLLERSRVCQIS DPERNYHCFYLLCAAPQEEVEKYKLGNPKTFHYLNQSNCYELVGVSDAHEYLATRRAMDIVGIS TQEQDAIFRVVAAILHIGNIEFAKGKEVDSSVLKDDKSKFHLDTTAELLMCDSGALGDALCKRV MVTPEEVIKRSLDPYNATVSRDGLAKTIYSRLFDWLVDKINSSIGQDPNSKSLIGVLDIYGFES FKLNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTKEQIDWSYIEFVDNQDVLDLIEKKPGGVI ALLDEACMFPKSTHETFSQKLYQTFQKHKRFVKPKLSRTDFTICHYAGEVLYQSDQFLDKNKDY VVAEHQELLSASKCSFISGLFPPLPEETSKSSKFSSIGARFKQQLQALMETLNSTEPHYIRCVK PNNVLKPAIFENVNVMQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGILAQEALEGKGRKLI L(+) MSMSCNSCVVVVYLRQSGSAVQVILHVAHFMSFCIALEYLLKRPLKERDES(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os06g0488200_circ_g.1

Address

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