Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d010974_circ_g.2 |
ID in PlantcircBase | zma_circ_002797 |
Alias | circ2764 |
Organism | Zea mays |
Position | chr8: 135536485-135541067 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d010974 |
Parent gene annotation |
E3 SUMO-protein ligase SIZ1 |
Parent gene strand | - |
Alternative splicing | Zm00001d010974_circ_g.1 Zm00001d010974_circ_g.3 Zm00001d010974_circ_g.4 |
Support reads | 11 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-CA |
Number of exons covered | Zm00001d010974_T072:9 Zm00001d010974_T001:9 Zm00001d010974_T060:10 Zm00001d010974_T031:9 Zm00001d010974_T005:9 Zm00001d010974_T050:9 Zm00001d010974_T018:9 Zm00001d010974_T057:10 Zm00001d010974_T014:9 Zm00001d010974_T008:9 Zm00001d010974_T041:9 Zm00001d010974_T048:9 Zm00001d010974_T021:9 Zm00001d010974_T047:9 Zm00001d010974_T055:9 Zm00001d010974_T033:9 Zm00001d010974_T025:9 Zm00001d010974_T038:9 Zm00001d010974_T007:9 Zm00001d010974_T044:9 Zm00001d010974_T027:9 Zm00001d010974_T037:8 Zm00001d010974_T075:8 Zm00001d010974_T059:10 Zm00001d010974_T040:9 Zm00001d010974_T012:10 Zm00001d010974_T045:8 Zm00001d010974_T051:9 Zm00001d010974_T017:8 Zm00001d010974_T026:9 Zm00001d010974_T010:9 Zm00001d010974_T002:9 Zm00001d010974_T042:9 Zm00001d010974_T022:8 Zm00001d010974_T024:8 Zm00001d010974_T065:8 Zm00001d010974_T034:9 Zm00001d010974_T023:9 Zm00001d010974_T029:9 Zm00001d010974_T049:8 Zm00001d010974_T061:3 Zm00001d010974_T053:9 Zm00001d010974_T030:9 Zm00001d010974_T062:10 Zm00001d010974_T015:10 Zm00001d010974_T028:9 Zm00001d010974_T036:8 Zm00001d010974_T035:8 Zm00001d010974_T020:9 Zm00001d010974_T004:9 Zm00001d010974_T063:9 Zm00001d010974_T043:9 Zm00001d010974_T056:9 Zm00001d010974_T006:9 Zm00001d010974_T052:9 Zm00001d010974_T064:10 Zm00001d010974_T046:9 Zm00001d010974_T016:9 Zm00001d010974_T013:9 Zm00001d010974_T039:9 Zm00001d010974_T054:8 Zm00001d010974_T003:9 Zm00001d010974_T019:10 Zm00001d010974_T011:10 Zm00001d010974_T058:10 Zm00001d010974_T032:9 Zm00001d010974_T009:9 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.09246503 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |