Splice junction sequence |
TAAAACCAAAAATTTGTAAACATGACTATAATGATATATATTTGTATTTACCGAAAATCTTGAA GTCTCCATCTTCAAAGGCTGGAACTTTACCAAAGGGgttgcggaagatgaaaggctctttcttg tgttcaccatctttgagctcgatatgaacgaattcaaagtcgagattcttctcgtgaagagcga tgagaact
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 260 Transcript exons: 659556-659781,661916-661949 GTTGCGGAAGATGAAAGGCTCTTTCTTGTGTTCACCATCTTTGAGCTCGATATGAACGAATTCA AAGTCGAGATTCTTCTCGTGAAGAGCGATGAGAACTCTTCTAGTGGCTGTGGAAGCTGGGTGAC CGAAAACTTTGATTCCTGCCATTTGTTAAGACTTTGTTCTTAAAGCAAGGTGGAGATTTATTGA AGTAGAGAGATCTTTGTGGTTGATGAAAAGAAATCTCCATCTTCAAAGGCTGGAACTTTACCAA AGGG
Transcript length: 274 Transcript exons: 659556-659780,661901-661949 GTTGCGGAAGATGAAAGGCTCTTTCTTGTGTTCACCATCTTTGAGCTCGATATGAACGAATTCA AAGTCGAGATTCTTCTCGTGAAGAGCGATGAGAACTCTTCTAGTGGCTGTGGAAGCTGGGTGAC CGAAAACTTTGATTCCTGCCATTTGTTAAGACTTTGTTCTTAAAGCAAGGTGGAGATTTATTGA AGTAGAGAGATCTTTGTGGTTGATGAAAAGAAACGAAAATCTTGAAGTCTCCATCTTCAAAGGC TGGAACTTTACCAAAGGG
Transcript length: 334 Transcript exons: 659556-659765,661826-661949 GTTGCGGAAGATGAAAGGCTCTTTCTTGTGTTCACCATCTTTGAGCTCGATATGAACGAATTCA AAGTCGAGATTCTTCTCGTGAAGAGCGATGAGAACTCTTCTAGTGGCTGTGGAAGCTGGGTGAC CGAAAACTTTGATTCCTGCCATTTGTTAAGACTTTGTTCTTAAAGCAAGGTGGAGATTTATTGA AGTAGAGAGATCTTTGTGTGCTTTCTATTATTGCAATGATCATAAAACCAAAAATTTGTAAACA TGACTATAATGATATATATTTGTATTTACCGAAAATCTTGAAGTCTCCATCTTCAAAGGCTGGA ACTTTACCAAAGGG
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Genomic sequence |
GTTGCGGAAGATGAAAGGCTCTTTCTTGTGTTCACCATCTTTGAGCTCGATATGAACGAATTCA AAGTCGAGATTCTTCTCGTGAAGAGCGATGAGAACTCTTCTAGTGGCTGTGGAAGCTGGGTGAC CGAAAACTTTGATTCCTGCCATTTGTTAAGACTTTGTTCTTAAAGCAAGGTGGAGATTTATTGA AGTAGAGAGATCTTTGTGGTTGATGAAAAGAAATACACAAATGGGAGAGTGTATTTATACAACT AAATTAGAGTAACTTAGTGAATAAACAAAAAACAAACGGCGCCACCAAGCTTGAATACTCTTTG TTATTTCATAGTCAAGCTGAGTAACGTATGATTCGTCGTTTCTATTGGTTCAAGATTTTCATAT ACTGTTCATATAACTTATAAAACAATATAATCGGAGAAAATATCAACCATGGCTGGATAAGACA ACAAGAATAGTCTTTTAATGTATACTAGTCAAAGTTGACCGACGTTGTTGAAAACATATGGATC GTTGGATGTTCAAATTGGATCATTGAATCAAGGAGATGAGGCAATGTGAAGTTATTATTAGTCA AGAAGCTATTCTTTTTGAATCGTTCTTCGTAATAAATCTATCTAGAACCTTCTCTAGCTTCGCC TTGCTTGCATTCACAACCTTATAGTCCGTCTTTAGATTTAATGGATTATACCCATGTAAGTATT GATGCGAGTGGATCGAACTCATAAGTTTCAATATCCATTCACAATGTTTGTGTTCCCATTGTTT TGTAGCTTTCGTAATTCACAAGTTATGAGCCTTTTGATCTATGGACAGACGAGATGTATTCAGA TATAGCTCGAGACTCTGAGCAAGACTAGACATATCAAAATTTTCCCGAAATCAAACTCAAAAAT GTTTATCAGATCAATAGTTGCATGAGTAAGGTCAAGAGGCTAAAAACCCTAATAAGATATAACA AATATAAGCAACTGATCGTTACGTAATAATATACCCTCGTTATAACAAGTTTACTAGGTCGTCG ATGACTAATCGCTAAATTAGTAAACAAAAATAGTTCAAAATAGGTCTACTTCAGTAAAGAGTTT AGAGATTAAAAGACGATCGTTCGAGCAGAAAAGACCAGTTAAATGGAAACCCTAGTTAAGACTT ACATTCCGTGAATACAAGTAATCTACCTAGGAAATGAGAATCCTAATTCCGGCGAGAATTGAAA AGGGTCTCCGTCTCCTGGTAATAACCATTTCCGTCGTTTCTTCGCACTCGAGTAAACAGAGGTT TTGCGACAGCTATGCAATTTATTTATATGCTTTCCTAAGAAAACCCTAATTTTATCTTAAACAC GCTTCCTTTTGTTCCTCTGTTTTATTTCGGAAACTAATTAACTTTCAACTTTTTTGATCTAGGA ACCTTTTTTGGTGACAGTTACGCTCAAACAAATATGAATAACATTGTTGACTTTGAAGCTTGCC ATCACCACAGAAGGTTTGGAATCGATTAGGGAAAGGAAGAAGATTAGTGATTGATGAGTAGCAG AGCGACCTAATTTGGAAGTCAACGTTCAAGACTTAGGAGAATGATAGTCAACTTTGAAGAATGA GATCAACATTAATTGGTAGTTAAACTTTAAGATAAGAAATATTTTATTATATCAAGACTCATTA TCGAAGATTACATTCAAATCAAACACTCGGCAGCAGAAAAACAGAGTAAACACAAAAAGAAAAA CAGAGTTTATGAGAATTGGGCAATTAGGTCATCGCCACTTTTATTACATCTTCTGATCGATAAA TAGTTTGAGATTCACTTAAAGAACCTTCTGAGCAGAAGGCCTTGAAGTGATGTCAGCAACCCAA GCACTCACATGTGGACGCTCGTCGAAGAGTTTCTTAGTTGGAGTTCCAAGTAAGTATTGAATCA CAGGGATAGTGTGAAGATCGACCAAAGTGAAGTGGTCAGAAGCCAAATACTTGGACTCACCAAG CCTGTGTTCGTAAACATCGAGGACTTTGGCTAGCTTAGCCTCTTCTTCTTCAACAACGGTTTTG TCTGTGGTCATACCATACAAAGGCTTTAAGACTTGCTCCCAAACAAGCTTTGAACCAACTGGGT CAAACTCATGCGACTCAATTTCAATGCCCATGGCTATGATCGCCATGTCCTTGCCAGTTGAGAG AAGGTTGTTTCCTTTGTCTGAGAATTCATGAGCTATGTATTGAGTAATTGCTCTTGATTCTGCC CACCAAAAAAAAAACATTTTTGAGTGTTTCTGCTTTCTATTATTGCAATGATCATAAAACCAAA AATTTGTAAACATGACTATAATGATATATATTTGTATTTACCGAAAATCTTGAAGTCTCCATCT TCAAAGGCTGGAACTTTACCAAAGGG |