Plant Circular RNA Database

Detail information of Zm00001d034361_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d034361_circ_g.1
					
						ID in PlantcircBase
						zma_circ_006952
					
						Alias
						Zm01circ00182
					
						Organism
						
							Zea mays						
					
						Position
						
							chr1: 290786280-290790968  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d034361						
					
						Parent gene annotation
						
							Cullin-4
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d034361_circ_g.2 Zm00001d034361_circ_g.3 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d034361_T008:2
Zm00001d034361_T002:5
Zm00001d034361_T001:5
Zm00001d034361_T006:4
Zm00001d034361_T004:5
Zm00001d034361_T007:4
Zm00001d034361_T005:4

General Information
CircRNA Name	Zm00001d034361_circ_g.1
ID in PlantcircBase	zma_circ_006952
Alias	Zm01circ00182
Organism	Zea mays
Position	chr1: 290786280-290790968 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	CIRI2
Parent gene	Zm00001d034361
Parent gene annotation	Cullin-4
Parent gene strand	+
Alternative splicing	Zm00001d034361_circ_g.2 Zm00001d034361_circ_g.3
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d034361_T008:2 Zm00001d034361_T002:5 Zm00001d034361_T001:5 Zm00001d034361_T006:4 Zm00001d034361_T004:5 Zm00001d034361_T007:4 Zm00001d034361_T005:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CATATTTATGTAGTTATGATAAAATATGTTGATTTACAGCTATTGGCCTACATATCCACCAATG
GACGTGAAACTCCCACACGAACTGAATGTGTATCAGaaccgtcctgcggaattgattgcaaagt
ttcttgatgagaaacttcgagctggcaataaagggacatcagaagaagagctggagggcatact
tgataaag

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							AACCGTCCTGCGGAATTGATTGCAAAGTTTCTTGATGAGAAACTTCGAGCTGGCAATAAAGGGA
CATCAGAAGAAGAGCTGGAGGGCATACTTGATAAAGTTTTGGTCATGTTTCGGTTTATACAAGT
AAGTTATAGATCTATTTCATTTGACTAATAAATTGCATTTCCTCTTGATTAGCAATATAATTTC
TACTTCTCTTTGTGAGGTTGCATTTTTGATGCACTACAGATATGGGGCCCTTTTTTTCTTAAAT
ATGCACTCTATGTACTAGAAAGGTGTAGGGGAAATAACCTTGCTGGCCAATTTTTTTCTGTCAA
AGCTGGGCAAAACTCGTGCTGTGAAAACAGCCATCCCAATTTTAACTGGTCAAATTTCGGCTTG
GTTATGAACCAAATGGAGGCTATCTGCCAAAGTGAGATCAAAATTTGGCTTGGCCTATTGGGGC
GGGCAACCTAACAGATCCTATCCAATAGATGGTATAAGTTGGGCCTTCCCAAACATGGTAATGT
TGGTGCCTTAAAAACATGGTGATTTTGTCTTAAATATTTAAATGGGAGTGAAAGACTGAGAAGC
CTGCCTTACTAGGCTTTATGAAAAGATAAAGTGCCGATTGTTAGAGTATATTAGGCATGTTAGA
GTATATTAGGCAACTCCTGATATGGTTGGTTTAACCTTCCTTATATCTAGAATAACCTTCCTTG
TCTCTAGGATAGGCTTCTTGCCCTCCAAGTCATGTACTCCTATCTATTCTCCCTAGAGGCCATC
CCACACACTATACGCATTCTCTCCTTCCATCATGGTATCACAAGTTTAGGTTTTAGATCCAATA
GGCGTCTTCCGCTGTCACCGTCGTGCTGCCCTCAGGGAGATTGTCCTCTGCCGGGGGCAGCGCC
CTCGTAGGATGCGCGGTCGATTCCTCTGTTTTGTCGTGCCCATCGTCGTCATCGCGTCAAGTCG
AAGTAGCAGTAGACCGGAAAACTCACCGTCGACGCTGCTCGGACCGGCCCCCGTCGACCTGCAC
CGGCTGGATTCGGCACCTCCACACGCCGTCGTGGTGACGGTTCTGGCCAGGTCGAATCCCTGCC
GCCGGCTGGGTCGTGCACCGCCATGGTGGCGGCTCCGACTCTCGCTGCCGGCCGGTCCGGCCGG
AGCCACGCGCCAAGCTTGCATGTTCGCGCTGGAGCCGTGTGCCCACGTCGGGACGCTGCGCTCG
CGCTGAGCCGCCCTCGCTTCGGTACCCCGGTGAATTCCCGCGCCTCGGTACCCCGGTGAATTCC
CCAGACCTGTTGCTGCTGTCTCTTTTTTTGTTTTCCCGGTCAGTGATCGGGTTTGCGTCTCCAT
CGCCCACCGCCAGTCGACTCGCGCGCCCTAGACGTCGTCTCCAACAACACTAGCTTCTTCATCT
TCTTCGACGGTGCAACTGGCGTGGCATGCGGCGTAATCGGAACGCCTGCCTGTGTCGCGCCTCT
TCATCTGCACATCCATCTATGCCGGCTCGTTGTCGCCACCACCGATTGGAAGGTCCACCATCGA
CATCACCATCGTCGTCTTCGACTCGCACGCCATCGGCTTGATCAATCGATCGCGGGCGAACCAT
CCTCCCGAGACGTTTCTCGTCCATTGCGCGATGCTTCGCCAAGCAAGAGGGCCGTCACTGCGTC
GCCTCCTCGGGCAGTAGCATCGCCGTCTGTCGTCAACCAACGTTGTTGCATCTACATCGCTGTC
GACTTCGTCGGTGCGCGTTTCCCGCGCATGGTTTGAGCGCAATCTAATATGTGGTGGGGAAATA
CCACCATTTGCTTGTCACGCAGTATGCACTTTACCTTGTCCTTATTGTTTATATCAACAAGAAC
CCCATGCTCCCATCCCACATCATCTGAATTTCTTCTAAGGCCACTAACTCCCTCTGGTGCACTT
GCAGTTTCAGATTGACCCTCTGTCATCTGAGTTCAAGCCATCAGTCAACAAATTACAAACTGAA
TATGTGAATAACAGAGGAGATGAGAGGAGAGAAGCAGGGGAGGAGGAACATACGGACCATGGGG
CTGTCCGCTGTCGTAGCGGAGGGGGTGCAGGTGCAGATGCGTCTCTGGCGTCCGACGGAGGGGT
TTTAGCCATGCAGGAGAGAAGCAAGTAGGGGGAGAGAAGCAGGGGTCTGTCGTCCGGCGTACAG
GAGAGAAGCTGCAGCCGCCCGCGTCTCCGGCGTTCTTTTCTCTCCCGCGCGCGCCGCCCTTTTC
TCTCCTTGCGCGTCGCCCTTTTCTCTCTCGTGCGCGCGCCACCCTTTTCTCTCCCGCGCGTGCC
CTTTTCTCTCCCGCGCGCGCCCTTTACCCGCACGCTATTTCCCGCTCGCGTGCGCGGCGCGCGC
CTAGCTCGCCTAAGCGCCGCCTGGGCTCCTGGGCGCCGCGGAATCGCCGCCTAGGCGCTCCAAT
CGACTAGGAGCCCGCCTACCCCCCTAGTCCAGGCGGGAGGTCGTGGCCTAGCGACTAGGCGCGC
CTAGGCGCATCGTAGGCGCCGATTTTCAAAACCCTGATTGGCACTATTGAGGCTTGTTTCCCAT
GTGTTGTGGCTCTCACCGTCGTGATTCTAGGAACCTCGATGTGTGGCCACGCCTACCTCTTCTC
TTCGCCCAGCACAACCTCGTCGCCAGCATCATCGTCTCATCCTCGACTACTTTGTCTACTCCGC
TCTGACAACCGTGCGTTACGCTGACACTCCCGTTGTGCTGCACCACAATCGTCGCGGAGACCTT
CTCTGCTGGTCCCTTGAGATGTTGGCACATATGGTTGGGGCCCTCTACCTAGTACGTCCGGTAC
TGGCACCACCGACACGTGCATTCATCCACAACGCGTTTCTAGGCTTGGCAGACCTGGAACACGC
ATCGTCCATGGCTGCTTGACGCGTCGCCCCTGACATCGACATCCTCATCTGCCTCGACGCATCG
CACCTTTGTCTACGACTGCTTCTCAGCGCCACCGTCATCACGACGTCCTCTGGCGCGCTGCAGG
CCTTCCGCGTGCCGCACCAGCACCCGCGACTTGTGCAGCTTGTCTTTTTCGACGTCCTCGACAA
CTTCCTCGACCACAGCTACCCTACGCACGACACCTCGACGACGGCTCGACGCCCTTGCACTTGG
CTACCTCGACATTATCAGCACAAAGAGCTATCATCTGCATGGGCTACTCCAGTCGCAACATTCG
CACCGGTGTTCCGACTGTGGATGGGATATCTCCATTATTCTCCGGTCTGTCCGTTCGTGTTGCT
AACGCTACGACTGCGGGGGGATGTTAGAATATATTAGGCGTGTTAGAGTATATTAGGCAGCTCC
TGATATGGTTGGTTTAGGATTGATTGTAATCCCAAGATAACCTTCCTTATATCTAGGATAACCT
TCCTTATCTCTAGGATAACCTTATTGTCCTCCAAGTCATGTACTCCTATATATTCTCCCTAGAG
GCTCACGGGCCGCCACTACAGGCGTCGGACAACAGCAGAGGCGGCGGCCAACAATAGGCATGCA
GATTAGTTAGATAAGGATTAGAAGATTAAGGAGATAAGGTTTGTTAGAGAGAAAAGAGGGGATC
TCAGATTTCTCTTTAGATAAGGACTAGAAGGGAGTGTAAATACTTGTAAGCACCACTCTATATG
AATTACGCAGAAAACTATTTAGCCTACTTCCTCCAAAGGAGCGACCGCCGAAGAACAACGCGGC
CCCTGCGCCAGTCCGCCGCGCGCCCGTCCACGGCGCCCTGCGCCAGCCCTCAACGCCTCATCCC
TGCAATCTGCACAGTCTCTATAATAGGAGCTGTAATCCTATCAGCCAAACCCTTTATTTCTTTT
GTATGATGTAATAAATTTGTTAAATGATTTCAAACTAACAAAATTGTTTAAGCGCTAACTGGAA
AACTCAATTATATAATAGTTTAATTGCAAGCTTTATATTTCATCATCTGCAGGGTAAAGATGTA
TTTGAGGCATTCTACAAGAAAGATCTAGCTAAGAGGTTGCTGCTTGGGAAGAGCGCATCAATAG
ATGCTGAAAAATCGATGATCACAAAAGTAATAATGTCTTTTCTAGTGTTTTCACATGTTCCGAC
ATATGTGGACAAGAACAACTTTACCAACATGCTTATGTTTGTAGCTCAAAACTGAGTGTGGAAG
TCAGTTTACCAATAAGCTGGAGGGAATGTTCAAGGTAGTGTTAGCTGTTTCTACTATGATGATA
TTTCTAGTCTTATTTTATTTTGCACACCTCTATAGTTCTATCGTTAGATGCATCTGAAATATCA
ATATTTCTTTATATAGATTCAGTGCCCTTTTAACATCTCTTATTACCTGCTGGTTGTAGGACAT
TGAATTATCCAAAGAAATAAACGATTCATTCAGGCAATCATCTCAAGCTAGGACAAAGCTTCCC
TCAGGCATTGAAATGAGTGTTCATGTGCTTACAACAGGGTAAATATTTTTGCCTCATTGCTTTG
ATACATACTCTCTGCAGAACTTGTTCCGGTTAGATAGCTTTGTAGACCTGATCTCATGCATGTG
CTCCGTAGTCCTAGCATGGCAGGCTGGCCTTTTGATGTTGTTGGTCATATTTATGTAGTTATGA
TAAAATATGTTGATTTACAGCTATTGGCCTACATATCCACCAATGGACGTGAAACTCCCACACG
AACTGAATGTGTATCAG
						
					

			
		

Sequences
Splice junction sequence	CATATTTATGTAGTTATGATAAAATATGTTGATTTACAGCTATTGGCCTACATATCCACCAATG GACGTGAAACTCCCACACGAACTGAATGTGTATCAGaaccgtcctgcggaattgattgcaaagt ttcttgatgagaaacttcgagctggcaataaagggacatcagaagaagagctggagggcatact tgataaag
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	AACCGTCCTGCGGAATTGATTGCAAAGTTTCTTGATGAGAAACTTCGAGCTGGCAATAAAGGGA CATCAGAAGAAGAGCTGGAGGGCATACTTGATAAAGTTTTGGTCATGTTTCGGTTTATACAAGT AAGTTATAGATCTATTTCATTTGACTAATAAATTGCATTTCCTCTTGATTAGCAATATAATTTC TACTTCTCTTTGTGAGGTTGCATTTTTGATGCACTACAGATATGGGGCCCTTTTTTTCTTAAAT ATGCACTCTATGTACTAGAAAGGTGTAGGGGAAATAACCTTGCTGGCCAATTTTTTTCTGTCAA AGCTGGGCAAAACTCGTGCTGTGAAAACAGCCATCCCAATTTTAACTGGTCAAATTTCGGCTTG GTTATGAACCAAATGGAGGCTATCTGCCAAAGTGAGATCAAAATTTGGCTTGGCCTATTGGGGC GGGCAACCTAACAGATCCTATCCAATAGATGGTATAAGTTGGGCCTTCCCAAACATGGTAATGT TGGTGCCTTAAAAACATGGTGATTTTGTCTTAAATATTTAAATGGGAGTGAAAGACTGAGAAGC CTGCCTTACTAGGCTTTATGAAAAGATAAAGTGCCGATTGTTAGAGTATATTAGGCATGTTAGA GTATATTAGGCAACTCCTGATATGGTTGGTTTAACCTTCCTTATATCTAGAATAACCTTCCTTG TCTCTAGGATAGGCTTCTTGCCCTCCAAGTCATGTACTCCTATCTATTCTCCCTAGAGGCCATC CCACACACTATACGCATTCTCTCCTTCCATCATGGTATCACAAGTTTAGGTTTTAGATCCAATA GGCGTCTTCCGCTGTCACCGTCGTGCTGCCCTCAGGGAGATTGTCCTCTGCCGGGGGCAGCGCC CTCGTAGGATGCGCGGTCGATTCCTCTGTTTTGTCGTGCCCATCGTCGTCATCGCGTCAAGTCG AAGTAGCAGTAGACCGGAAAACTCACCGTCGACGCTGCTCGGACCGGCCCCCGTCGACCTGCAC CGGCTGGATTCGGCACCTCCACACGCCGTCGTGGTGACGGTTCTGGCCAGGTCGAATCCCTGCC GCCGGCTGGGTCGTGCACCGCCATGGTGGCGGCTCCGACTCTCGCTGCCGGCCGGTCCGGCCGG AGCCACGCGCCAAGCTTGCATGTTCGCGCTGGAGCCGTGTGCCCACGTCGGGACGCTGCGCTCG CGCTGAGCCGCCCTCGCTTCGGTACCCCGGTGAATTCCCGCGCCTCGGTACCCCGGTGAATTCC CCAGACCTGTTGCTGCTGTCTCTTTTTTTGTTTTCCCGGTCAGTGATCGGGTTTGCGTCTCCAT CGCCCACCGCCAGTCGACTCGCGCGCCCTAGACGTCGTCTCCAACAACACTAGCTTCTTCATCT TCTTCGACGGTGCAACTGGCGTGGCATGCGGCGTAATCGGAACGCCTGCCTGTGTCGCGCCTCT TCATCTGCACATCCATCTATGCCGGCTCGTTGTCGCCACCACCGATTGGAAGGTCCACCATCGA CATCACCATCGTCGTCTTCGACTCGCACGCCATCGGCTTGATCAATCGATCGCGGGCGAACCAT CCTCCCGAGACGTTTCTCGTCCATTGCGCGATGCTTCGCCAAGCAAGAGGGCCGTCACTGCGTC GCCTCCTCGGGCAGTAGCATCGCCGTCTGTCGTCAACCAACGTTGTTGCATCTACATCGCTGTC GACTTCGTCGGTGCGCGTTTCCCGCGCATGGTTTGAGCGCAATCTAATATGTGGTGGGGAAATA CCACCATTTGCTTGTCACGCAGTATGCACTTTACCTTGTCCTTATTGTTTATATCAACAAGAAC CCCATGCTCCCATCCCACATCATCTGAATTTCTTCTAAGGCCACTAACTCCCTCTGGTGCACTT GCAGTTTCAGATTGACCCTCTGTCATCTGAGTTCAAGCCATCAGTCAACAAATTACAAACTGAA TATGTGAATAACAGAGGAGATGAGAGGAGAGAAGCAGGGGAGGAGGAACATACGGACCATGGGG CTGTCCGCTGTCGTAGCGGAGGGGGTGCAGGTGCAGATGCGTCTCTGGCGTCCGACGGAGGGGT TTTAGCCATGCAGGAGAGAAGCAAGTAGGGGGAGAGAAGCAGGGGTCTGTCGTCCGGCGTACAG GAGAGAAGCTGCAGCCGCCCGCGTCTCCGGCGTTCTTTTCTCTCCCGCGCGCGCCGCCCTTTTC TCTCCTTGCGCGTCGCCCTTTTCTCTCTCGTGCGCGCGCCACCCTTTTCTCTCCCGCGCGTGCC CTTTTCTCTCCCGCGCGCGCCCTTTACCCGCACGCTATTTCCCGCTCGCGTGCGCGGCGCGCGC CTAGCTCGCCTAAGCGCCGCCTGGGCTCCTGGGCGCCGCGGAATCGCCGCCTAGGCGCTCCAAT CGACTAGGAGCCCGCCTACCCCCCTAGTCCAGGCGGGAGGTCGTGGCCTAGCGACTAGGCGCGC CTAGGCGCATCGTAGGCGCCGATTTTCAAAACCCTGATTGGCACTATTGAGGCTTGTTTCCCAT GTGTTGTGGCTCTCACCGTCGTGATTCTAGGAACCTCGATGTGTGGCCACGCCTACCTCTTCTC TTCGCCCAGCACAACCTCGTCGCCAGCATCATCGTCTCATCCTCGACTACTTTGTCTACTCCGC TCTGACAACCGTGCGTTACGCTGACACTCCCGTTGTGCTGCACCACAATCGTCGCGGAGACCTT CTCTGCTGGTCCCTTGAGATGTTGGCACATATGGTTGGGGCCCTCTACCTAGTACGTCCGGTAC TGGCACCACCGACACGTGCATTCATCCACAACGCGTTTCTAGGCTTGGCAGACCTGGAACACGC ATCGTCCATGGCTGCTTGACGCGTCGCCCCTGACATCGACATCCTCATCTGCCTCGACGCATCG CACCTTTGTCTACGACTGCTTCTCAGCGCCACCGTCATCACGACGTCCTCTGGCGCGCTGCAGG CCTTCCGCGTGCCGCACCAGCACCCGCGACTTGTGCAGCTTGTCTTTTTCGACGTCCTCGACAA CTTCCTCGACCACAGCTACCCTACGCACGACACCTCGACGACGGCTCGACGCCCTTGCACTTGG CTACCTCGACATTATCAGCACAAAGAGCTATCATCTGCATGGGCTACTCCAGTCGCAACATTCG CACCGGTGTTCCGACTGTGGATGGGATATCTCCATTATTCTCCGGTCTGTCCGTTCGTGTTGCT AACGCTACGACTGCGGGGGGATGTTAGAATATATTAGGCGTGTTAGAGTATATTAGGCAGCTCC TGATATGGTTGGTTTAGGATTGATTGTAATCCCAAGATAACCTTCCTTATATCTAGGATAACCT TCCTTATCTCTAGGATAACCTTATTGTCCTCCAAGTCATGTACTCCTATATATTCTCCCTAGAG GCTCACGGGCCGCCACTACAGGCGTCGGACAACAGCAGAGGCGGCGGCCAACAATAGGCATGCA GATTAGTTAGATAAGGATTAGAAGATTAAGGAGATAAGGTTTGTTAGAGAGAAAAGAGGGGATC TCAGATTTCTCTTTAGATAAGGACTAGAAGGGAGTGTAAATACTTGTAAGCACCACTCTATATG AATTACGCAGAAAACTATTTAGCCTACTTCCTCCAAAGGAGCGACCGCCGAAGAACAACGCGGC CCCTGCGCCAGTCCGCCGCGCGCCCGTCCACGGCGCCCTGCGCCAGCCCTCAACGCCTCATCCC TGCAATCTGCACAGTCTCTATAATAGGAGCTGTAATCCTATCAGCCAAACCCTTTATTTCTTTT GTATGATGTAATAAATTTGTTAAATGATTTCAAACTAACAAAATTGTTTAAGCGCTAACTGGAA AACTCAATTATATAATAGTTTAATTGCAAGCTTTATATTTCATCATCTGCAGGGTAAAGATGTA TTTGAGGCATTCTACAAGAAAGATCTAGCTAAGAGGTTGCTGCTTGGGAAGAGCGCATCAATAG ATGCTGAAAAATCGATGATCACAAAAGTAATAATGTCTTTTCTAGTGTTTTCACATGTTCCGAC ATATGTGGACAAGAACAACTTTACCAACATGCTTATGTTTGTAGCTCAAAACTGAGTGTGGAAG TCAGTTTACCAATAAGCTGGAGGGAATGTTCAAGGTAGTGTTAGCTGTTTCTACTATGATGATA TTTCTAGTCTTATTTTATTTTGCACACCTCTATAGTTCTATCGTTAGATGCATCTGAAATATCA ATATTTCTTTATATAGATTCAGTGCCCTTTTAACATCTCTTATTACCTGCTGGTTGTAGGACAT TGAATTATCCAAAGAAATAAACGATTCATTCAGGCAATCATCTCAAGCTAGGACAAAGCTTCCC TCAGGCATTGAAATGAGTGTTCATGTGCTTACAACAGGGTAAATATTTTTGCCTCATTGCTTTG ATACATACTCTCTGCAGAACTTGTTCCGGTTAGATAGCTTTGTAGACCTGATCTCATGCATGTG CTCCGTAGTCCTAGCATGGCAGGCTGGCCTTTTGATGTTGTTGGTCATATTTATGTAGTTATGA TAAAATATGTTGATTTACAGCTATTGGCCTACATATCCACCAATGGACGTGAAACTCCCACACG AACTGAATGTGTATCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.034285439

Conservation Information
Conserved circRNAs	NA
PMCS	0.034285439

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							290786389-290790965(+)
290786391-290790967(-)
290786348-290790918(-)
						
						Potential amino acid sequence
						
							MFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMITKLKTECGSQFTNKLEGMFKDIELSK
EINDSFRQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQNRPAELIAKFLDEK
LRAGNKGTSEEELEGILDKVLVMFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMITKLK
TECGSQFTNKLEGMFKDIELSKEINDSFRQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKL
PHELNVYQNRPAELIAKFLDEKLRAGNKGTSEEELEGILDKVLVMFRFIQGKDVFEAFYKKDLA
KRLLLGKSASIDAEKSMITKLKTECGSQFTNKLEGMFKDIELSKEINDSFRQSSQARTKLPSGI
EMSVHVLTTGYWPTYPPMDVKLPHELNVYQNRPAELIAKFLDEKLRAGNKGTSEEELEGILDKV
LVMFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMITKLKTECGSQFTNKLEGMFKDIEL
SKEINDSFRQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQ(+)
MTKTLSSMPSSSSSDVPLLPARSFSSRNFAINSAGRF*(-)
MSLYCQLEVSHQETLQSIPQDGSDTHSVRVGVSRPLVDM*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	290786389-290790965(+) 290786391-290790967(-) 290786348-290790918(-)
Potential amino acid sequence	MFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMITKLKTECGSQFTNKLEGMFKDIELSK EINDSFRQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQNRPAELIAKFLDEK LRAGNKGTSEEELEGILDKVLVMFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMITKLK TECGSQFTNKLEGMFKDIELSKEINDSFRQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKL PHELNVYQNRPAELIAKFLDEKLRAGNKGTSEEELEGILDKVLVMFRFIQGKDVFEAFYKKDLA KRLLLGKSASIDAEKSMITKLKTECGSQFTNKLEGMFKDIELSKEINDSFRQSSQARTKLPSGI EMSVHVLTTGYWPTYPPMDVKLPHELNVYQNRPAELIAKFLDEKLRAGNKGTSEEELEGILDKV LVMFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMITKLKTECGSQFTNKLEGMFKDIEL SKEINDSFRQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQ(+) MTKTLSSMPSSSSSDVPLLPARSFSSRNFAINSAGRF(-) MSLYCQLEVSHQETLQSIPQDGSDTHSVRVGVSRPLVDM(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d034361_circ_g.1

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