Plant Circular RNA Database

Detail information of Zm00001d030935_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d030935_circ_g.1
					
						ID in PlantcircBase
						zma_circ_006669
					
						Alias
						zma_circ_0000303
					
						Organism
						
							Zea mays						
					
						Position
						
							chr1: 168030650-168033714  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Zm00001d030935						
					
						Parent gene annotation
						
							protein_coding
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d030935_T013:5
Zm00001d030935_T003:5
Zm00001d030935_T001:5
Zm00001d030935_T006:5
Zm00001d030935_T014:5
Zm00001d030935_T007:5
Zm00001d030935_T015:3
Zm00001d030935_T019:3
Zm00001d030935_T004:5
Zm00001d030935_T011:5
Zm00001d030935_T021:1
Zm00001d030935_T017:3
Zm00001d030935_T008:5
Zm00001d030935_T002:5

General Information
CircRNA Name	Zm00001d030935_circ_g.1
ID in PlantcircBase	zma_circ_006669
Alias	zma_circ_0000303
Organism	Zea mays
Position	chr1: 168030650-168033714 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d030935
Parent gene annotation	protein_coding
Parent gene strand	+
Alternative splicing	NA
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d030935_T013:5 Zm00001d030935_T003:5 Zm00001d030935_T001:5 Zm00001d030935_T006:5 Zm00001d030935_T014:5 Zm00001d030935_T007:5 Zm00001d030935_T015:3 Zm00001d030935_T019:3 Zm00001d030935_T004:5 Zm00001d030935_T011:5 Zm00001d030935_T021:1 Zm00001d030935_T017:3 Zm00001d030935_T008:5 Zm00001d030935_T002:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TAATCAACATATGTATGTATCAGTCAAAAACACTGGAAGTACATACCAAGTGATTGGTGCATAC
CATTATTCCCTTGCTGGTGAATACGCATTGTTTAAGcttatcgaaagcatgcatttggatgcat
tgaagtctgatcctggaaacttcaaatattccagagattttattggaagactagcatcgtttta
taaaaaag

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTATCGAAAGCATGCATTTGGATGCATTGAAGTCTGATCCTGGAAACTTCAAATATTCCAGAG
ATTTTATTGGAAGACTAGCATCGTTTTATAAAAAAGATATGAAGGGGAGCACAATGGAGCTTGT
TGAACATATTGCGGAGGAAGACACATCGGATCCTCATGTAGAACTCAGTGTTGAACTGCAACTT
GATTTGGAGTCATCAGACATCATCTTTAGTGCTTCACGTGGTGGACTTCGGATAAATCCTACTG
TGTTTATCAATAGTTTTATAAACTGCATCAGCAGCTCACCTGTATTTGACAACATAGCAGCACA
GGAATTACTTGATGTATTAGCTCTAGATGTTGGGTTCTGCTTGAAAAGTTCTTCTGTGAAACTT
CTCCTTAATGGAGAATGCACAGACTTAATCGTTAGCCTATCTGGAATTCAGTGTGTGATGTTCG
AGAATCAATCTCAAATGAGAACTTATAATGATATACTCCAGCATGAATACATATCTAGTGGCTT
ACTGCATAGCAAGAACCAGCTCCTTATATCAGAATGTGTCTTTCATATTAGTGTTGATTCCAAT
ATCAACTTGACTGACAAGAAACTGCAACATGAATCTAGTAGTCGTCGCATATCTGCTTCTCTAG
GAAATTTGTATTCAATTAAAATTGAATTTTCAGAGGTTTTTGTTGGAGACTACAGAATACACAG
TTACCTATCCGATTTGAGGCAGCACAGCAAACATAAAACCTCGCTGTTGATCCATGATGGTCTT
CAGGTTGTCAAATGCAAAATCCAGGTACACCACTCCTCTTGAAGTCTTTTCTGCTGATTCTGCT
AACATGGTTTCAGGTATATTGACATTGTTTTGCATGTTCTTATTGTGAAAATGTCCAGCTATGA
AGCATTTAGTTTATTTCTGAGTTGTTCCTAATTGGCACCCCGTTTTTTGTTGTCTTGCTTTGCT
TCTAAGGTATACTATATAACTGCTATTGGCAGGGTGGCTTGATCTTTCTGGAAACAATTTCATT
AGCTAAGCTTGTTCTGTGTTGCAAAGTTCACTTAGGGCTGCTTGTGGATCTCTCACTGCGGGCA
ACATCAAACTTAGTCAAAGATACGGTAGCTCCAATTTCTGCAGGAGGTGTTACCAACAAGTATA
CTGAGAGAGGGGCAACAACAGTGCCTTTAGGTGCTCATGTTCAAAGTATGGAATCCCAATTGAG
TGTCATCAAATGCTTTGATATTGAGTTAACTTGGATATCTCTGACTCTTGTTGTCTTGGACAAA
TCAGGTAATTGTTTTATATGCCTATCCTTAGTTCAATTGTGCCGCCAATAAATTATATATCTTT
TCCTGCATTTAGGTACACATCAGGGATTAACTTTTGAAGTCGATGCGAGTCTTCAACAAATGAA
GCTTGGCATGGAGTTTTTGTTTGAAGTGAAGCGCCTTTCGATCTCCACTGTCAGTAATATCTGC
AAGAATTCCCGTGAACAATTAAGAGATGTACCAGGACCTCATTTTCGATCCAGCAAGTCTGTTG
ATCTTTCACCTCAGTCTGAAATTCAAGAATATCTCCCATTTGTAGAAGCAGACAATATGCGTAG
TTATGATCACGAAGCTCCTTCAAGCTCAAGTTCTGTACCTGGAAGTGTAACAGGCAACATATCA
CTAGATTTTTCATCACGTGAAAATCAGATACTGAAGCATTTCTCTGCTTATCTCAAGATCGAGA
GAAAAAATTTGGATGGTCACTCCGGTTTTGAACGTTTGTGTGGTGATTGGTCTGGAAGTGGGTC
TCTTTCTGGATTGGAGGTTGCAATGTCACTCTCAAACGTTGAGGTGATCTCTCTCTCTCTCTAT
CTCTCTCTGACTTACTATGTTTTGTCTGTAATTTATGGGTGACTAGTTCTAGAAAAACAAATAG
AGACTACGAGAAAAATTAGGAGAACTATCATAATTGACACCCTGCTTTACATTCTAGACCAAAT
GGTTTGAATTGTTCTTTCGTCTCCATGTTCAGAATTGGAGCTTATTTGGCACATTTATGACTGC
ATATATCATGTCTATTTTCATCATTAGTTCCATGGATACTGTCATATACTAACACCCTTCTTTT
CAGCTATGCGCACTCCCCCCTCCCCCCCCATTAACCCTGGTTCCTTGCAAAAGTTGTCATAAAA
ATATATATCTTTTTGGCAACATGTGCTATTTGCATCCACTTCTGTGACAACTGACAAGCACTCA
GTTTTGGAGACAAACTTTTTTTCTCGAACACGCAAGAGAATTGTGCATCATTATATTAAGAAGA
ATAAGGACGTTCTAAGATAGACCAAAGAACAAACTGCCCTTGAAGGCAGGAAGAGAGGGGACAA
AAAATAAGTTACAATTAAAAAAAAGAGGGAAAGAGGGGGGGGGGGGCAGCAGCCCCCACACCAT
CCAAATTATGGCCACAGCTGTCTAATATCCTTTGCTCCCGCCTTCCCCAAAGGTTAACATTCTC
TTGCACGATCTTGCGGATACTCGGGGGTGCCCCATCAAACACGCAAGCATTCCTATGTTTCTAT
GTTTTGGAGACAAACTGAGAAAAATATCTCATCAAGAATATGGAAATGCATTCGTTGCAGTTTA
TGAGTATAAAACATTTGGTCATGGCTATCCAAGTCAGATTTGGTGCAGTTCAACTACACATTAT
GTTCTATGAAATTATGAATTATCCAATGAGTATAGCTTTTCTCTGCAGATGATCTCGTCGCTAC
TTGCTCCTGTTTATGGGATAATAAGTTCTGGTTCAACTCAGAAGAAAATACTGTCTGGTGGCAC
CAGTCACCAGGCACAGCTAGATCCCATGGATTATACTATACCTGATGGTAATTCTGCTTAACGA
CAGACCTGCATCTTATAGACCTAAATAACACTGCTAATCCATGTATTATTGCCATAACAGGAGC
TATTGTTGCTATAAGGGATCTTAATCAACATATGTATGTATCAGTCAAAAACACTGGAAGTACA
TACCAAGTGATTGGTGCATACCATTATTCCCTTGCTGGTGAATACGCATTGTTTAAG
						
					

			
		

Sequences
Splice junction sequence	TAATCAACATATGTATGTATCAGTCAAAAACACTGGAAGTACATACCAAGTGATTGGTGCATAC CATTATTCCCTTGCTGGTGAATACGCATTGTTTAAGcttatcgaaagcatgcatttggatgcat tgaagtctgatcctggaaacttcaaatattccagagattttattggaagactagcatcgtttta taaaaaag
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTATCGAAAGCATGCATTTGGATGCATTGAAGTCTGATCCTGGAAACTTCAAATATTCCAGAG ATTTTATTGGAAGACTAGCATCGTTTTATAAAAAAGATATGAAGGGGAGCACAATGGAGCTTGT TGAACATATTGCGGAGGAAGACACATCGGATCCTCATGTAGAACTCAGTGTTGAACTGCAACTT GATTTGGAGTCATCAGACATCATCTTTAGTGCTTCACGTGGTGGACTTCGGATAAATCCTACTG TGTTTATCAATAGTTTTATAAACTGCATCAGCAGCTCACCTGTATTTGACAACATAGCAGCACA GGAATTACTTGATGTATTAGCTCTAGATGTTGGGTTCTGCTTGAAAAGTTCTTCTGTGAAACTT CTCCTTAATGGAGAATGCACAGACTTAATCGTTAGCCTATCTGGAATTCAGTGTGTGATGTTCG AGAATCAATCTCAAATGAGAACTTATAATGATATACTCCAGCATGAATACATATCTAGTGGCTT ACTGCATAGCAAGAACCAGCTCCTTATATCAGAATGTGTCTTTCATATTAGTGTTGATTCCAAT ATCAACTTGACTGACAAGAAACTGCAACATGAATCTAGTAGTCGTCGCATATCTGCTTCTCTAG GAAATTTGTATTCAATTAAAATTGAATTTTCAGAGGTTTTTGTTGGAGACTACAGAATACACAG TTACCTATCCGATTTGAGGCAGCACAGCAAACATAAAACCTCGCTGTTGATCCATGATGGTCTT CAGGTTGTCAAATGCAAAATCCAGGTACACCACTCCTCTTGAAGTCTTTTCTGCTGATTCTGCT AACATGGTTTCAGGTATATTGACATTGTTTTGCATGTTCTTATTGTGAAAATGTCCAGCTATGA AGCATTTAGTTTATTTCTGAGTTGTTCCTAATTGGCACCCCGTTTTTTGTTGTCTTGCTTTGCT TCTAAGGTATACTATATAACTGCTATTGGCAGGGTGGCTTGATCTTTCTGGAAACAATTTCATT AGCTAAGCTTGTTCTGTGTTGCAAAGTTCACTTAGGGCTGCTTGTGGATCTCTCACTGCGGGCA ACATCAAACTTAGTCAAAGATACGGTAGCTCCAATTTCTGCAGGAGGTGTTACCAACAAGTATA CTGAGAGAGGGGCAACAACAGTGCCTTTAGGTGCTCATGTTCAAAGTATGGAATCCCAATTGAG TGTCATCAAATGCTTTGATATTGAGTTAACTTGGATATCTCTGACTCTTGTTGTCTTGGACAAA TCAGGTAATTGTTTTATATGCCTATCCTTAGTTCAATTGTGCCGCCAATAAATTATATATCTTT TCCTGCATTTAGGTACACATCAGGGATTAACTTTTGAAGTCGATGCGAGTCTTCAACAAATGAA GCTTGGCATGGAGTTTTTGTTTGAAGTGAAGCGCCTTTCGATCTCCACTGTCAGTAATATCTGC AAGAATTCCCGTGAACAATTAAGAGATGTACCAGGACCTCATTTTCGATCCAGCAAGTCTGTTG ATCTTTCACCTCAGTCTGAAATTCAAGAATATCTCCCATTTGTAGAAGCAGACAATATGCGTAG TTATGATCACGAAGCTCCTTCAAGCTCAAGTTCTGTACCTGGAAGTGTAACAGGCAACATATCA CTAGATTTTTCATCACGTGAAAATCAGATACTGAAGCATTTCTCTGCTTATCTCAAGATCGAGA GAAAAAATTTGGATGGTCACTCCGGTTTTGAACGTTTGTGTGGTGATTGGTCTGGAAGTGGGTC TCTTTCTGGATTGGAGGTTGCAATGTCACTCTCAAACGTTGAGGTGATCTCTCTCTCTCTCTAT CTCTCTCTGACTTACTATGTTTTGTCTGTAATTTATGGGTGACTAGTTCTAGAAAAACAAATAG AGACTACGAGAAAAATTAGGAGAACTATCATAATTGACACCCTGCTTTACATTCTAGACCAAAT GGTTTGAATTGTTCTTTCGTCTCCATGTTCAGAATTGGAGCTTATTTGGCACATTTATGACTGC ATATATCATGTCTATTTTCATCATTAGTTCCATGGATACTGTCATATACTAACACCCTTCTTTT CAGCTATGCGCACTCCCCCCTCCCCCCCCATTAACCCTGGTTCCTTGCAAAAGTTGTCATAAAA ATATATATCTTTTTGGCAACATGTGCTATTTGCATCCACTTCTGTGACAACTGACAAGCACTCA GTTTTGGAGACAAACTTTTTTTCTCGAACACGCAAGAGAATTGTGCATCATTATATTAAGAAGA ATAAGGACGTTCTAAGATAGACCAAAGAACAAACTGCCCTTGAAGGCAGGAAGAGAGGGGACAA AAAATAAGTTACAATTAAAAAAAAGAGGGAAAGAGGGGGGGGGGGGCAGCAGCCCCCACACCAT CCAAATTATGGCCACAGCTGTCTAATATCCTTTGCTCCCGCCTTCCCCAAAGGTTAACATTCTC TTGCACGATCTTGCGGATACTCGGGGGTGCCCCATCAAACACGCAAGCATTCCTATGTTTCTAT GTTTTGGAGACAAACTGAGAAAAATATCTCATCAAGAATATGGAAATGCATTCGTTGCAGTTTA TGAGTATAAAACATTTGGTCATGGCTATCCAAGTCAGATTTGGTGCAGTTCAACTACACATTAT GTTCTATGAAATTATGAATTATCCAATGAGTATAGCTTTTCTCTGCAGATGATCTCGTCGCTAC TTGCTCCTGTTTATGGGATAATAAGTTCTGGTTCAACTCAGAAGAAAATACTGTCTGGTGGCAC CAGTCACCAGGCACAGCTAGATCCCATGGATTATACTATACCTGATGGTAATTCTGCTTAACGA CAGACCTGCATCTTATAGACCTAAATAACACTGCTAATCCATGTATTATTGCCATAACAGGAGC TATTGTTGCTATAAGGGATCTTAATCAACATATGTATGTATCAGTCAAAAACACTGGAAGTACA TACCAAGTGATTGGTGCATACCATTATTCCCTTGCTGGTGAATACGCATTGTTTAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.066902427

Conservation Information
Conserved circRNAs	NA
PMCS	0.066902427

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							168030663-168033711(+)
168030669-168033636(-)
						
					

						Potential amino acid sequence
						
							MHLDALKSDPGNFKYSRDFIGRLASFYKKDMKGSTMELVEHIAEEDTSDPHVELSVELQLDLES
SDIIFSASRGGLRINPTVFINSFINCISSSPVFDNIAAQELLDVLALDVGFCLKSSSVKLLLNG
ECTDLIVSLSGIQCVMFENQSQMRTYNDILQHEYISSGLLHSKNQLLISECVFHISVDSNINLT
DKKLQHESSSRRISASLGNLYSIKIEFSEVFVGDYRIHSYLSDLRQHSKHKTSLLIHDGLQVVK
CKIQGGLIFLETISLAKLVLCCKVHLGLLVDLSLRATSNLVKDTVAPISAGGVTNKYTERGATT
VPLGAHVQSMESQLSVIKCFDIELTWISLTLVVLDKSGTHQGLTFEVDASLQQMKLGMEFLFEV
KRLSISTVSNICKNSREQLRDVPGPHFRSSKSVDLSPQSEIQEYLPFVEADNMRSYDHEAPSSS
SSVPGSVTGNISLDFSSRENQILKHFSAYLKIERKNLDGHSGFERLCGDWSGSGSLSGLEVAMS
LSNVEMISSLLAPVYGIISSGSTQKKILSGGTSHQAQLDPMDYTIPDGAIVAIRDLNQHMYVSV
KNTGSTYQVIGAYHYSLAGEYALFKLIESMHLDALKSDPGNFKYSRDFIGRLASFYKKDMKGST
MELVEHIAEEDTSDPHVELSVELQLDLESSDIIFSASRGGLRINPTVFINSFINCISSSPVFDN
IAAQELLDVLALDVGFCLKSSSVKLLLNGECTDLIVSLSGIQCVMFENQSQMRTYNDILQHEYI
SSGLLHSKNQLLISECVFHISVDSNINLTDKKLQHESSSRRISASLGNLYSIKIEFSEVFVGDY
RIHSYLSDLRQHSKHKTSLLIHDGLQVVKCKIQGGLIFLETISLAKLVLCCKVHLGLLVDLSLR
ATSNLVKDTVAPISAGGVTNKYTERGATTVPLGAHVQSMESQLSVIKCFDIELTWISLTLVVLD
KSGTHQGLTFEVDASLQQMKLGMEFLFEVKRLSISTVSNICKNSREQLRDVPGPHFRSSKSVDL
SPQSEIQEYLPFVEADNMRSYDHEAPSSSSSVPGSVTGNISLDFSSRENQILKHFSAYLKIERK
NLDGHSGFERLCGDWSGSGSLSGLEVAMSLSNVEMISSLLAPVYGIISSGSTQKKILSGGTSHQ
AQLDPMDYTIPDGAIVAIRDLNQHMYVSVKNTGSTYQVIGAYHYSLAGEYALFKLIESMHLDAL
KSDPGNFKYSRDFIGRLASFYKKDMKGSTMELVEHIAEEDTSDPHVELSVELQLDLESSDIIFS
ASRGGLRINPTVFINSFINCISSSPVFDNIAAQELLDVLALDVGFCLKSSSVKLLLNGECTDLI
VSLSGIQCVMFENQSQMRTYNDILQHEYISSGLLHSKNQLLISECVFHISVDSNINLTDKKLQH
ESSSRRISASLGNLYSIKIEFSEVFVGDYRIHSYLSDLRQHSKHKTSLLIHDGLQVVKCKIQGG
LIFLETISLAKLVLCCKVHLGLLVDLSLRATSNLVKDTVAPISAGGVTNKYTERGATTVPLGAH
VQSMESQLSVIKCFDIELTWISLTLVVLDKSGTHQGLTFEVDASLQQMKLGMEFLFEVKRLSIS
TVSNICKNSREQLRDVPGPHFRSSKSVDLSPQSEIQEYLPFVEADNMRSYDHEAPSSSSSVPGS
VTGNISLDFSSRENQILKHFSAYLKIERKNLDGHSGFERLCGDWSGSGSLSGLEVAMSLSNVEM
ISSLLAPVYGIISSGSTQKKILSGGTSHQAQLDPMDYTIPDGAIVAIRDLNQHMYVSVKNTGST
YQVIGAYHYSLAGEYALFKLIESMHLDALKSDPGNFKYSRDFIGRLASFYKKDMKGSTMELVEH
IAEEDTSDPHVELSVELQLDLESSDIIFSASRGGLRINPTVFINSFINCISSSPVFDNIAAQEL
LDVLALDVGFCLKSSSVKLLLNGECTDLIVSLSGIQCVMFENQSQMRTYNDILQHEYISSGLLH
SKNQLLISECVFHISVDSNINLTDKKLQHESSSRRISASLGNLYSIKIEFSEVFVGDYRIHSYL
SDLRQHSKHKTSLLIHDGLQVVKCKIQGGLIFLETISLAKLVLCCKVHLGLLVDLSLRATSNLV
KDTVAPISAGGVTNKYTERGATTVPLGAHVQSMESQLSVIKCFDIELTWISLTLVVLDKSGTHQ
GLTFEVDASLQQMKLGMEFLFEVKRLSISTVSNICKNSREQLRDVPGPHFRSSKSVDLSPQSEI
QEYLPFVEADNMRSYDHEAPSSSSSVPGSVTGNISLDFSSRENQILKHFSAYLKIERKNLDGHS
GFERLCGDWSGSGSLSGLEVAMSLSNVEMISSLLAPVYGIISSGSTQKKILSGGTSHQAQLDPM
DYTIPDGAIVAIRDLNQHMYVSVKNTGSTYQVIGAYHYSLAGEYALFK(+)
MHAFDKLKQCVFTSKGIMVCTNHLVCTSSVFD*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	168030663-168033711(+) 168030669-168033636(-)
Potential amino acid sequence	MHLDALKSDPGNFKYSRDFIGRLASFYKKDMKGSTMELVEHIAEEDTSDPHVELSVELQLDLES SDIIFSASRGGLRINPTVFINSFINCISSSPVFDNIAAQELLDVLALDVGFCLKSSSVKLLLNG ECTDLIVSLSGIQCVMFENQSQMRTYNDILQHEYISSGLLHSKNQLLISECVFHISVDSNINLT DKKLQHESSSRRISASLGNLYSIKIEFSEVFVGDYRIHSYLSDLRQHSKHKTSLLIHDGLQVVK CKIQGGLIFLETISLAKLVLCCKVHLGLLVDLSLRATSNLVKDTVAPISAGGVTNKYTERGATT VPLGAHVQSMESQLSVIKCFDIELTWISLTLVVLDKSGTHQGLTFEVDASLQQMKLGMEFLFEV KRLSISTVSNICKNSREQLRDVPGPHFRSSKSVDLSPQSEIQEYLPFVEADNMRSYDHEAPSSS SSVPGSVTGNISLDFSSRENQILKHFSAYLKIERKNLDGHSGFERLCGDWSGSGSLSGLEVAMS LSNVEMISSLLAPVYGIISSGSTQKKILSGGTSHQAQLDPMDYTIPDGAIVAIRDLNQHMYVSV KNTGSTYQVIGAYHYSLAGEYALFKLIESMHLDALKSDPGNFKYSRDFIGRLASFYKKDMKGST MELVEHIAEEDTSDPHVELSVELQLDLESSDIIFSASRGGLRINPTVFINSFINCISSSPVFDN IAAQELLDVLALDVGFCLKSSSVKLLLNGECTDLIVSLSGIQCVMFENQSQMRTYNDILQHEYI SSGLLHSKNQLLISECVFHISVDSNINLTDKKLQHESSSRRISASLGNLYSIKIEFSEVFVGDY RIHSYLSDLRQHSKHKTSLLIHDGLQVVKCKIQGGLIFLETISLAKLVLCCKVHLGLLVDLSLR ATSNLVKDTVAPISAGGVTNKYTERGATTVPLGAHVQSMESQLSVIKCFDIELTWISLTLVVLD KSGTHQGLTFEVDASLQQMKLGMEFLFEVKRLSISTVSNICKNSREQLRDVPGPHFRSSKSVDL SPQSEIQEYLPFVEADNMRSYDHEAPSSSSSVPGSVTGNISLDFSSRENQILKHFSAYLKIERK NLDGHSGFERLCGDWSGSGSLSGLEVAMSLSNVEMISSLLAPVYGIISSGSTQKKILSGGTSHQ AQLDPMDYTIPDGAIVAIRDLNQHMYVSVKNTGSTYQVIGAYHYSLAGEYALFKLIESMHLDAL KSDPGNFKYSRDFIGRLASFYKKDMKGSTMELVEHIAEEDTSDPHVELSVELQLDLESSDIIFS ASRGGLRINPTVFINSFINCISSSPVFDNIAAQELLDVLALDVGFCLKSSSVKLLLNGECTDLI VSLSGIQCVMFENQSQMRTYNDILQHEYISSGLLHSKNQLLISECVFHISVDSNINLTDKKLQH ESSSRRISASLGNLYSIKIEFSEVFVGDYRIHSYLSDLRQHSKHKTSLLIHDGLQVVKCKIQGG LIFLETISLAKLVLCCKVHLGLLVDLSLRATSNLVKDTVAPISAGGVTNKYTERGATTVPLGAH VQSMESQLSVIKCFDIELTWISLTLVVLDKSGTHQGLTFEVDASLQQMKLGMEFLFEVKRLSIS TVSNICKNSREQLRDVPGPHFRSSKSVDLSPQSEIQEYLPFVEADNMRSYDHEAPSSSSSVPGS VTGNISLDFSSRENQILKHFSAYLKIERKNLDGHSGFERLCGDWSGSGSLSGLEVAMSLSNVEM ISSLLAPVYGIISSGSTQKKILSGGTSHQAQLDPMDYTIPDGAIVAIRDLNQHMYVSVKNTGST YQVIGAYHYSLAGEYALFKLIESMHLDALKSDPGNFKYSRDFIGRLASFYKKDMKGSTMELVEH IAEEDTSDPHVELSVELQLDLESSDIIFSASRGGLRINPTVFINSFINCISSSPVFDNIAAQEL LDVLALDVGFCLKSSSVKLLLNGECTDLIVSLSGIQCVMFENQSQMRTYNDILQHEYISSGLLH SKNQLLISECVFHISVDSNINLTDKKLQHESSSRRISASLGNLYSIKIEFSEVFVGDYRIHSYL SDLRQHSKHKTSLLIHDGLQVVKCKIQGGLIFLETISLAKLVLCCKVHLGLLVDLSLRATSNLV KDTVAPISAGGVTNKYTERGATTVPLGAHVQSMESQLSVIKCFDIELTWISLTLVVLDKSGTHQ GLTFEVDASLQQMKLGMEFLFEVKRLSISTVSNICKNSREQLRDVPGPHFRSSKSVDLSPQSEI QEYLPFVEADNMRSYDHEAPSSSSSVPGSVTGNISLDFSSRENQILKHFSAYLKIERKNLDGHS GFERLCGDWSGSGSLSGLEVAMSLSNVEMISSLLAPVYGIISSGSTQKKILSGGTSHQAQLDPM DYTIPDGAIVAIRDLNQHMYVSVKNTGSTYQVIGAYHYSLAGEYALFK(+) MHAFDKLKQCVFTSKGIMVCTNHLVCTSSVFD*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d030935_circ_g.1

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