Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os10g0572900_circ_g.1 |
ID in PlantcircBase | osa_circ_008117 |
Alias | Os10circ10491 |
Organism | Oryza sativa |
Position | chr10: 22742329-22745034 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ei-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Os10g0572900 |
Parent gene annotation |
Similar to AT-hook protein 1. (Os10t0572900-01);Protein of unkno wn function DUF296 domain containing protein. (Os10t0572900-02); Similar to AT-hook protein 1. (Os10t0572900-03) |
Parent gene strand | - |
Alternative splicing | Os10g0572900_circ_igg.1 |
Support reads | 2 |
Tissues | panicle |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Os10t0572900-03:3 Os10t0572900-01:2 Os10t0572900-02:5 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.123979043 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |