Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d022405_circ_g.2 |
ID in PlantcircBase | zma_circ_009502 |
Alias | zma_circ_0002676 |
Organism | Zea mays |
Position | chr7: 176873600-176884516 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d022405 |
Parent gene annotation |
Protein CHROMATIN REMODELING 5 |
Parent gene strand | - |
Alternative splicing | Zm00001d022405_circ_g.3 Zm00001d022405_circ_g.4 Zm00001d022405_circ_g.5 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | Yes-No |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d022405_T048:16 Zm00001d022405_T050:18 Zm00001d022405_T008:18 Zm00001d022405_T022:16 Zm00001d022405_T046:14 Zm00001d022405_T051:18 Zm00001d022405_T019:8 Zm00001d022405_T032:11 Zm00001d022405_T026:18 Zm00001d022405_T055:14 Zm00001d022405_T047:16 Zm00001d022405_T040:18 Zm00001d022405_T044:18 Zm00001d022405_T012:16 Zm00001d022405_T013:16 Zm00001d022405_T006:18 Zm00001d022405_T036:16 Zm00001d022405_T049:14 Zm00001d022405_T025:18 Zm00001d022405_T024:16 Zm00001d022405_T009:16 Zm00001d022405_T057:16 Zm00001d022405_T038:16 Zm00001d022405_T015:1 Zm00001d022405_T028:18 Zm00001d022405_T007:18 Zm00001d022405_T058:18 Zm00001d022405_T045:18 Zm00001d022405_T041:18 Zm00001d022405_T042:9 Zm00001d022405_T005:18 Zm00001d022405_T016:8 Zm00001d022405_T029:17 Zm00001d022405_T034:13 Zm00001d022405_T003:18 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.094009481 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |