Plant Circular RNA Database

Detail information of Csa1G598330_circ_g.2

			
						 General Information
					
						CircRNA Name
						Csa1G598330_circ_g.2
					
						ID in PlantcircBase
						csa_circ_000548
					
						Alias
						Chr1:22837733_22842532
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr1: 22837733-22842532  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Csa1G598330						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							Csa1G598330_circ_g.3 						
					
						Support reads
						NA
					
						Tissues
						leaf,root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa1G598330.1:6
Csa1G598330.2:6

General Information
CircRNA Name	Csa1G598330_circ_g.2
ID in PlantcircBase	csa_circ_000548
Alias	Chr1:22837733_22842532
Organism	Cucumis sativus
Position	chrChr1: 22837733-22842532 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	CIRI2
Parent gene	Csa1G598330
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	Csa1G598330_circ_g.3
Support reads	NA
Tissues	leaf,root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa1G598330.1:6 Csa1G598330.2:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CAGATATGATCATATTAGTGATTTGTACCACCATGATTTGGAAGGCAATGGTGTGATATGTTCA
GCTGTTGACATTCTTCCAACAGAGTTTGCCAAAGAGgatatttgagccttggaatttccactcc
tttcctgtcgctgggtatgtcatacatgtatacatccctggctgctgcaaaggctgcagtgata
tctgtggg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 719
Transcript exons: 22837733-22837906,22839186-22839268,22840549-22840665,22
841386-22841461,22842064-22842235,22842436-22842532
GATATTTGAGCCTTGGAATTTCCACTCCTTTCCTGTCGCTGGGTATGTCATACATGTATACATC
CCTGGCTGCTGCAAAGGCTGCAGTGATATCTGTGGGTGAGGAGATTGCAACACAGGGCTTGCCA
CCGGAGATTTGTCCATTGGTCATTGTGTTTACTGGTTCAGGAAATGTTTCTCATGGAGCACAAG
AAATTTTCAAGCTTCTTCCTCACACTTTTGTGGACCCGAGTAAACTTCCAGAAATTTGTGGGAA
GAATGTGGAACTTTGCCAACATGGAGCAACAAAAAAGAGGGTCTTCCAAGTATTTGGTTGTGTT
GTGAGTTGCCAACACATGGTTGAGCACAAAGATTCCACAAAAAAATATGATAGAGTTGATTACT
ATGCTCATCCAGACCAATATAGACCTATATTCCATGAAAAGATAGCTCCGTATGCTTCTGTTAT
TGTAAATTGCATGTACTGGGAGGGAAGATTTCCACGGTTGCTGACCACCGTGCAGTTTCAAGAT
CTAATGAGAAGTGGATGCCCTCTTGTTGGAATTTCAGATATAACTTGTGATGTAGGGGGTTCAA
TAGAATTCATTAATCAGACAACGTCAATTGACTCTCCTTTCTTCCGATATGATCATATTAGTGA
TTTGTACCACCATGATTTGGAAGGCAATGGTGTGATATGTTCAGCTGTTGACATTCTTCCAACA
GAGTTTGCCAAAGAG
						
					

						Genomic sequence
						
							GATATTTGAGCCTTGGAATTTCCACTCCTTTCCTGTCGCTGGGTATGTCATACATGTATACATC
CCTGGCTGCTGCAAAGGCTGCAGTGATATCTGTGGGTGAGGAGATTGCAACACAGGGCTTGCCA
CCGGAGATTTGTCCATTGGTCATTGTGTTTACTGGTTCAGGAAATGGTATTATATATTTTAATT
GATTGACCTTTTCAAAATTCATAGTATTTAGAGCTACAAATCCACAAGCTGCTCATGATTGTTT
TCTCCCTATAATCCCAACCCAAACTTTTATGCACGACTATTCATATTGGTTGATTTTTTTGGTT
ATAGAAATAGAAATTGTATTAATTCATAAAACGTTTTGAGAAAAATAAAAATATTAGAAAATCA
AGCATTTAGAGTACTAAGATATAAGAATGGTTCCAAAATTTAAATTTTTATAGTTTTGGTTAAA
CAAAAAGTGAGAAATAAAATTCGTTTCTAGATAATTTATCACTATGCTTTTTCATCATATGATA
TACAAACCTTCATTTTCACCCAAAACCAGAGGAAGGGCTGACACTGCCCACATGAAGAATATCC
CACCTCCTGCAAACGTTGAGAATTGAACTACCTCAAAATCAACCACAGGAATTAAACTTCGCCA
TGTTAAAATTTTATCCATTTTATAAAACCCCCTTTTCACTGACTGATACAAACAAAACGAAGTA
GACTTACGAGAATATCTCCCTAGCCACAGCCAATACACCTGATATATTCACATTAAATAATGGG
ATTACCATTACCCAGGCACCTTAACTATTTTGATTTTAATACAATTTTCCAATCAAAGAAGCTA
ACTTTGGTGTATTTTATAATCCATTTTAATATTTTAAGACACTTTTCCAATCAAAGAACTTTTT
TGTTTGTTTGTTTGTGGAGAATCAAATAATTGACCTTTGGGCTAGTAATTGATGCCTCATCCAC
TAAGCTATACTCAATTAGCTTTATAAGAATAACCTTGTGATCTTACATACCAAAGAAGTTAAAA
AGAGCAACAGACTGAAAGAAGACAGATCCCAAAAAGTTTGTTACAGCTTTTTTGGGAAGTTGTA
AACTTGTGCTTCAATGAAATTACCTTATATGGACAACCTGAAAATAGGTCAATTAGTTTTGGCA
TATACTATCGACTGATGTGAACTCCAAAAAGAAAAGCAATATCCTAATATGCAAATACATTTGT
TTTCAAACTATTGAATTACTGACAGATCAACTTTCAAGTTTCTCATGCAATTATCTCATAAAGA
AAGTGACCGTTACATTGGCTTGAATAAGTCCTCTATATGTTTTTTGAATTACTGAATCACAGTT
GATTGACTTTCAAGTTTTTCATGTATCAATTATGTTATAAAGATAGTGACCGTTGCATTGGTTC
GCATACATCCTCCACGAATTTGATCTCCCTTTGATTCCTGTGCAGTTTCTCATGGAGCACAAGA
AATTTTCAAGCTTCTTCCTCACACTTTTGTGGACCCGAGTAAACTTCCAGAAATTTGTGGGAAG
GTGGGTTCCAGGTACCCCTTCATATATCCTATTCACAAATAATTTAACATAGTTGTCTGTCATT
GAACCAATTGATTGTTGTCAAGCAAGTTGAAAATTCAAAGTTGGTGATAGGTAAGCCAGCATCA
TTAGATGAAGGTGTTGGCAGTATTATGGGTTCTCCTCCTCAGTCATATGCCTATTAGAAACATT
GGTTACCCAACATGTTGACTTTTCTTTAATGGAACTGGGGAATGCTGTGACTTGATAATGTATT
ATAACTTTTCTTAAAAATCCATAATTCACAGTTCTTTCCTTTCTTTACTTGTCTTCACTCTTCC
CCATGCTTGTTGCTTCATTGTCTAGTATCTATATAATTTTTCCCTCACAAATTTTACCCCCATG
AGAAATAGATACAATGAATAAATTCTTAAATAAAATTGAAATCAGTTTTAAAAAGACTTGTCAT
CTATTTGTTTGACACGCATTTGTAGTTCTTAGAAACCTTAAGCTACTTAAAATTGAAGTTACAT
AAATCATTGAAAAAAATGTGAAATTTGAATTTCTTAGGACGACAACACCTTATTTTTAGTGTCT
TAAAGAATTGAACATCAAATATTTAAGAATTTTAATTGATCATAATTACTTACTATAATTTTTT
TGATAATTGGAGTAAATGGCCTAGCTTTACTTTTCATTATTATGTCATTGGCTATTTTGACATA
TTGGTTGCAAAATGAAAAATAAGGAATTGAAATCTACAACTTTTCCATGTACATAATATGTCTA
TAATCTCCTCTATGAATTCAGATTTGTTTCAGTCTTTGTGGCTATTCGTTCATGACGTTAGATG
CTCTCTATTATGTTAAACATCATATACCTTCTGCTACATAGATGCTTATTTTCTGATATTGACT
TTAATACACTGATTGGTAAAATTAGCATGTAGTGTTTTTAATGTTTTTATAATTTTATCGAAAA
ATATTCATCATTGGAACTTTGATTTTCTTAGAAAATATCTATCATCATTGTCCTCTTCATTTTA
AGGACGTTGATCATTTCACCTTTGGCAGTGACACATTCAGGGATAATTTGAATCAAGCAAGATT
CAAACTGACTTGTGGTTTATTGCACTGTATTCCATGCTAAAGAAATTTTCAATGTCACACAATG
TTCAAGCAATGCTTCTTCAAACTCACTAGCACTTTAACACGTTCTTGTTCTATCTGGAGGATGA
TTTATTTTTTTTGAGCTACTTTTAAATACTTAATGCTCAACAGTTTTTCTCCTGCTGTTCTTAG
AATGTGGAACTTTGCCAACATGGAGCAACAAAAAAGAGGGTCTTCCAAGTATTTGGTTGTGTTG
TGAGTTGCCAACACATGGTTGAGCACAAAGATTCCACAAAAAAATATGATAGAGTAAGTTTTTG
TTCACCTTTTCTTTTGCTTGAGTCAATTTGTGATTGGGATTTTGGATCTTGAAATTTTACTATT
TTCTTTTCAAAATATAAAATATACAAAATATCAGTCGCTTTTGCATGGTAAAATCAATTGATTA
GAAAGTGGATGGATTGATCAAAGAAGGGTCATGTAGTTTCCGGACAAATTTGCAACACAAAAAT
CGTGTACATACTATGTAGAAACCACAGGGATACAGCCACATCATTCTTCAAACATTAGAACATA
AGTGTGGTATAATAAAGAAAATATGGAATCGGTTTGTGAAAGTTATTCATGATATGATATGACT
CCCCAATGATACATCTGTTACACTTGTTGTAGTTATAGGCTCTGATGCTGTGGTATTATCAAAA
TACCTCTGTTTGAATCAGAAAGATGCAAAGTGAGAAGTTTTATGCCATGAATCTACTTTCAGTT
GTGGAAAATTAATTCTTACGGGTTTTATGTAGTCTCATGATATATTGCCATTTAAAGCCTTTTG
GCATGTCCTTTCCCCAGATGACTACATTGCTTTAAGTTCTTACTTCCTGTATCTAAGTTCATTT
GTGAACATTCGGGTTTCCTACAAAGTCCCTTGTCTACAATTGAGTGTTTCAATGTCTTTGCATG
CCTTTTTCTTTGTATGGGGTTTTGTGGGAGAAAATGAACCTAAATTTCAGTTCTTATCTTGTTT
TTCAGGTTGATTACTATGCTCATCCAGACCAATATAGACCTATATTCCATGAAAAGATAGCTCC
GTATGCTTCTGTTATTGGTATGCTTTCTTTTCCTTATTTCCTTGTTAACTTCAACTGAGACACA
TTTACTCACATCTTTTTGTTTTAACTGTCATAGTGGAAGTCAGATATCTTTACCTTTTCTCATT
TTTTACTTTCTTTTCCAGCTTTCTGGATCTTACTTGAATATATAACCATTCACTATTAATCTTT
ATTCAAGAGACGATCGGTTATTTCGTAGCTACAAGCCTGCTGCTTAACTGAAATTGAAAGGGGT
GCATTTTGCATTTGCATTTGCATTTGCGGGCAACATCTTTCATTTCTTTTGTCCTATAATATTT
CTAGTCTTGATGTGGCGTTTGTTTGAATATGTGTATGTGCCCAGGCATGTATGCATGTGATTTT
ATTATTCCCATATCAAGTGTAGGTCGTCCATTCATTGTGCAGCCCTAGGTATAAAATTTGACGT
TATATGATGCAAATATTCTCACTTATATAATGAAAATAAACTTTCAGTGAACAATTATATAATG
CTTCATTACTGGATGCTTGTACTGGAATGAGGCAGGTTTCTGTTGGTTGGATACAACAGCGCAT
ACTTATCTTGCTACATTTTGCCAATTTCTTCGCTGTTTTGTAGTAAATTGCATGTACTGGGAGG
GAAGATTTCCACGGTTGCTGACCACCGTGCAGTTTCAAGATCTAATGAGAAGTGGATGCCCTCT
TGTTGGAATTTCAGATATAACTTGTGATGTAGGGGGTTCAATAGAATTCATTAATCAGACAACG
TCAATTGACTCTCCTTTCTTCCGGTACCTAAGATTATTATCCATGGATGCAGAGTCTTTAGACA
ATCACTCCCTCTCTATCCCCTCTTATTGTTATCGTTAATTTTATTTAATAAATTCCATATTGCT
TGAGGGTCCTAGAAATTTGGTTGGCTTTCTGTTGTGGATACTTCAGCGTCATCGTTTTATGTGC
TTGAACGTGTAAAAAAATGTGCACCTTTCAGATATGATCATATTAGTGATTTGTACCACCATGA
TTTGGAAGGCAATGGTGTGATATGTTCAGCTGTTGACATTCTTCCAACAGAGTTTGCCAAAGAG
						
					

			
		

Sequences
Splice junction sequence	CAGATATGATCATATTAGTGATTTGTACCACCATGATTTGGAAGGCAATGGTGTGATATGTTCA GCTGTTGACATTCTTCCAACAGAGTTTGCCAAAGAGgatatttgagccttggaatttccactcc tttcctgtcgctgggtatgtcatacatgtatacatccctggctgctgcaaaggctgcagtgata tctgtggg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 719 Transcript exons: 22837733-22837906,22839186-22839268,22840549-22840665,22 841386-22841461,22842064-22842235,22842436-22842532 GATATTTGAGCCTTGGAATTTCCACTCCTTTCCTGTCGCTGGGTATGTCATACATGTATACATC CCTGGCTGCTGCAAAGGCTGCAGTGATATCTGTGGGTGAGGAGATTGCAACACAGGGCTTGCCA CCGGAGATTTGTCCATTGGTCATTGTGTTTACTGGTTCAGGAAATGTTTCTCATGGAGCACAAG AAATTTTCAAGCTTCTTCCTCACACTTTTGTGGACCCGAGTAAACTTCCAGAAATTTGTGGGAA GAATGTGGAACTTTGCCAACATGGAGCAACAAAAAAGAGGGTCTTCCAAGTATTTGGTTGTGTT GTGAGTTGCCAACACATGGTTGAGCACAAAGATTCCACAAAAAAATATGATAGAGTTGATTACT ATGCTCATCCAGACCAATATAGACCTATATTCCATGAAAAGATAGCTCCGTATGCTTCTGTTAT TGTAAATTGCATGTACTGGGAGGGAAGATTTCCACGGTTGCTGACCACCGTGCAGTTTCAAGAT CTAATGAGAAGTGGATGCCCTCTTGTTGGAATTTCAGATATAACTTGTGATGTAGGGGGTTCAA TAGAATTCATTAATCAGACAACGTCAATTGACTCTCCTTTCTTCCGATATGATCATATTAGTGA TTTGTACCACCATGATTTGGAAGGCAATGGTGTGATATGTTCAGCTGTTGACATTCTTCCAACA GAGTTTGCCAAAGAG
Genomic sequence	GATATTTGAGCCTTGGAATTTCCACTCCTTTCCTGTCGCTGGGTATGTCATACATGTATACATC CCTGGCTGCTGCAAAGGCTGCAGTGATATCTGTGGGTGAGGAGATTGCAACACAGGGCTTGCCA CCGGAGATTTGTCCATTGGTCATTGTGTTTACTGGTTCAGGAAATGGTATTATATATTTTAATT GATTGACCTTTTCAAAATTCATAGTATTTAGAGCTACAAATCCACAAGCTGCTCATGATTGTTT TCTCCCTATAATCCCAACCCAAACTTTTATGCACGACTATTCATATTGGTTGATTTTTTTGGTT ATAGAAATAGAAATTGTATTAATTCATAAAACGTTTTGAGAAAAATAAAAATATTAGAAAATCA AGCATTTAGAGTACTAAGATATAAGAATGGTTCCAAAATTTAAATTTTTATAGTTTTGGTTAAA CAAAAAGTGAGAAATAAAATTCGTTTCTAGATAATTTATCACTATGCTTTTTCATCATATGATA TACAAACCTTCATTTTCACCCAAAACCAGAGGAAGGGCTGACACTGCCCACATGAAGAATATCC CACCTCCTGCAAACGTTGAGAATTGAACTACCTCAAAATCAACCACAGGAATTAAACTTCGCCA TGTTAAAATTTTATCCATTTTATAAAACCCCCTTTTCACTGACTGATACAAACAAAACGAAGTA GACTTACGAGAATATCTCCCTAGCCACAGCCAATACACCTGATATATTCACATTAAATAATGGG ATTACCATTACCCAGGCACCTTAACTATTTTGATTTTAATACAATTTTCCAATCAAAGAAGCTA ACTTTGGTGTATTTTATAATCCATTTTAATATTTTAAGACACTTTTCCAATCAAAGAACTTTTT TGTTTGTTTGTTTGTGGAGAATCAAATAATTGACCTTTGGGCTAGTAATTGATGCCTCATCCAC TAAGCTATACTCAATTAGCTTTATAAGAATAACCTTGTGATCTTACATACCAAAGAAGTTAAAA AGAGCAACAGACTGAAAGAAGACAGATCCCAAAAAGTTTGTTACAGCTTTTTTGGGAAGTTGTA AACTTGTGCTTCAATGAAATTACCTTATATGGACAACCTGAAAATAGGTCAATTAGTTTTGGCA TATACTATCGACTGATGTGAACTCCAAAAAGAAAAGCAATATCCTAATATGCAAATACATTTGT TTTCAAACTATTGAATTACTGACAGATCAACTTTCAAGTTTCTCATGCAATTATCTCATAAAGA AAGTGACCGTTACATTGGCTTGAATAAGTCCTCTATATGTTTTTTGAATTACTGAATCACAGTT GATTGACTTTCAAGTTTTTCATGTATCAATTATGTTATAAAGATAGTGACCGTTGCATTGGTTC GCATACATCCTCCACGAATTTGATCTCCCTTTGATTCCTGTGCAGTTTCTCATGGAGCACAAGA AATTTTCAAGCTTCTTCCTCACACTTTTGTGGACCCGAGTAAACTTCCAGAAATTTGTGGGAAG GTGGGTTCCAGGTACCCCTTCATATATCCTATTCACAAATAATTTAACATAGTTGTCTGTCATT GAACCAATTGATTGTTGTCAAGCAAGTTGAAAATTCAAAGTTGGTGATAGGTAAGCCAGCATCA TTAGATGAAGGTGTTGGCAGTATTATGGGTTCTCCTCCTCAGTCATATGCCTATTAGAAACATT GGTTACCCAACATGTTGACTTTTCTTTAATGGAACTGGGGAATGCTGTGACTTGATAATGTATT ATAACTTTTCTTAAAAATCCATAATTCACAGTTCTTTCCTTTCTTTACTTGTCTTCACTCTTCC CCATGCTTGTTGCTTCATTGTCTAGTATCTATATAATTTTTCCCTCACAAATTTTACCCCCATG AGAAATAGATACAATGAATAAATTCTTAAATAAAATTGAAATCAGTTTTAAAAAGACTTGTCAT CTATTTGTTTGACACGCATTTGTAGTTCTTAGAAACCTTAAGCTACTTAAAATTGAAGTTACAT AAATCATTGAAAAAAATGTGAAATTTGAATTTCTTAGGACGACAACACCTTATTTTTAGTGTCT TAAAGAATTGAACATCAAATATTTAAGAATTTTAATTGATCATAATTACTTACTATAATTTTTT TGATAATTGGAGTAAATGGCCTAGCTTTACTTTTCATTATTATGTCATTGGCTATTTTGACATA TTGGTTGCAAAATGAAAAATAAGGAATTGAAATCTACAACTTTTCCATGTACATAATATGTCTA TAATCTCCTCTATGAATTCAGATTTGTTTCAGTCTTTGTGGCTATTCGTTCATGACGTTAGATG CTCTCTATTATGTTAAACATCATATACCTTCTGCTACATAGATGCTTATTTTCTGATATTGACT TTAATACACTGATTGGTAAAATTAGCATGTAGTGTTTTTAATGTTTTTATAATTTTATCGAAAA ATATTCATCATTGGAACTTTGATTTTCTTAGAAAATATCTATCATCATTGTCCTCTTCATTTTA AGGACGTTGATCATTTCACCTTTGGCAGTGACACATTCAGGGATAATTTGAATCAAGCAAGATT CAAACTGACTTGTGGTTTATTGCACTGTATTCCATGCTAAAGAAATTTTCAATGTCACACAATG TTCAAGCAATGCTTCTTCAAACTCACTAGCACTTTAACACGTTCTTGTTCTATCTGGAGGATGA TTTATTTTTTTTGAGCTACTTTTAAATACTTAATGCTCAACAGTTTTTCTCCTGCTGTTCTTAG AATGTGGAACTTTGCCAACATGGAGCAACAAAAAAGAGGGTCTTCCAAGTATTTGGTTGTGTTG TGAGTTGCCAACACATGGTTGAGCACAAAGATTCCACAAAAAAATATGATAGAGTAAGTTTTTG TTCACCTTTTCTTTTGCTTGAGTCAATTTGTGATTGGGATTTTGGATCTTGAAATTTTACTATT TTCTTTTCAAAATATAAAATATACAAAATATCAGTCGCTTTTGCATGGTAAAATCAATTGATTA GAAAGTGGATGGATTGATCAAAGAAGGGTCATGTAGTTTCCGGACAAATTTGCAACACAAAAAT CGTGTACATACTATGTAGAAACCACAGGGATACAGCCACATCATTCTTCAAACATTAGAACATA AGTGTGGTATAATAAAGAAAATATGGAATCGGTTTGTGAAAGTTATTCATGATATGATATGACT CCCCAATGATACATCTGTTACACTTGTTGTAGTTATAGGCTCTGATGCTGTGGTATTATCAAAA TACCTCTGTTTGAATCAGAAAGATGCAAAGTGAGAAGTTTTATGCCATGAATCTACTTTCAGTT GTGGAAAATTAATTCTTACGGGTTTTATGTAGTCTCATGATATATTGCCATTTAAAGCCTTTTG GCATGTCCTTTCCCCAGATGACTACATTGCTTTAAGTTCTTACTTCCTGTATCTAAGTTCATTT GTGAACATTCGGGTTTCCTACAAAGTCCCTTGTCTACAATTGAGTGTTTCAATGTCTTTGCATG CCTTTTTCTTTGTATGGGGTTTTGTGGGAGAAAATGAACCTAAATTTCAGTTCTTATCTTGTTT TTCAGGTTGATTACTATGCTCATCCAGACCAATATAGACCTATATTCCATGAAAAGATAGCTCC GTATGCTTCTGTTATTGGTATGCTTTCTTTTCCTTATTTCCTTGTTAACTTCAACTGAGACACA TTTACTCACATCTTTTTGTTTTAACTGTCATAGTGGAAGTCAGATATCTTTACCTTTTCTCATT TTTTACTTTCTTTTCCAGCTTTCTGGATCTTACTTGAATATATAACCATTCACTATTAATCTTT ATTCAAGAGACGATCGGTTATTTCGTAGCTACAAGCCTGCTGCTTAACTGAAATTGAAAGGGGT GCATTTTGCATTTGCATTTGCATTTGCGGGCAACATCTTTCATTTCTTTTGTCCTATAATATTT CTAGTCTTGATGTGGCGTTTGTTTGAATATGTGTATGTGCCCAGGCATGTATGCATGTGATTTT ATTATTCCCATATCAAGTGTAGGTCGTCCATTCATTGTGCAGCCCTAGGTATAAAATTTGACGT TATATGATGCAAATATTCTCACTTATATAATGAAAATAAACTTTCAGTGAACAATTATATAATG CTTCATTACTGGATGCTTGTACTGGAATGAGGCAGGTTTCTGTTGGTTGGATACAACAGCGCAT ACTTATCTTGCTACATTTTGCCAATTTCTTCGCTGTTTTGTAGTAAATTGCATGTACTGGGAGG GAAGATTTCCACGGTTGCTGACCACCGTGCAGTTTCAAGATCTAATGAGAAGTGGATGCCCTCT TGTTGGAATTTCAGATATAACTTGTGATGTAGGGGGTTCAATAGAATTCATTAATCAGACAACG TCAATTGACTCTCCTTTCTTCCGGTACCTAAGATTATTATCCATGGATGCAGAGTCTTTAGACA ATCACTCCCTCTCTATCCCCTCTTATTGTTATCGTTAATTTTATTTAATAAATTCCATATTGCT TGAGGGTCCTAGAAATTTGGTTGGCTTTCTGTTGTGGATACTTCAGCGTCATCGTTTTATGTGC TTGAACGTGTAAAAAAATGTGCACCTTTCAGATATGATCATATTAGTGATTTGTACCACCATGA TTTGGAAGGCAATGGTGTGATATGTTCAGCTGTTGACATTCTTCCAACAGAGTTTGCCAAAGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.469208878

Conservation Information
Conserved circRNAs	NA
PMCS	0.469208878

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							22837778-22837738(+)
						
						Potential amino acid sequence
						
							MSYMYTSLAAAKAAVISVGEEIATQGLPPEICPLVIVFTGSGNVSHGAQEIFKLLPHTFVDPSK
LPEICGKNVELCQHGATKKRVFQVFGCVVSCQHMVEHKDSTKKYDRVDYYAHPDQYRPIFHEKI
APYASVIVNCMYWEGRFPRLLTTVQFQDLMRSGCPLVGISDITCDVGGSIEFINQTTSIDSPFF
RYDHISDLYHHDLEGNGVICSAVDILPTEFAKEDI*
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to salt stress in root

Functional Information
Coding potential	Y
Potential coding position	22837778-22837738(+)
Potential amino acid sequence	MSYMYTSLAAAKAAVISVGEEIATQGLPPEICPLVIVFTGSGNVSHGAQEIFKLLPHTFVDPSK LPEICGKNVELCQHGATKKRVFQVFGCVVSCQHMVEHKDSTKKYDRVDYYAHPDQYRPIFHEKI APYASVIVNCMYWEGRFPRLLTTVQFQDLMRSGCPLVGISDITCDVGGSIEFINQTTSIDSPFF RYDHISDLYHHDLEGNGVICSAVDILPTEFAKEDI*
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to salt stress in root

			
						 Other Information
					
						References
						Zhu et al., 2019

circRNA

Detail information of Csa1G598330_circ_g.2

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