Plant Circular RNA Database

Detail information of Zm00001d053196_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d053196_circ_g.2
					
						ID in PlantcircBase
						zma_circ_008253
					
						Alias
						Zm04circ00094
					
						Organism
						
							Zea mays						
					
						Position
						
							chr4: 219332421-219336475  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d053196						
					
						Parent gene annotation
						
							Proline--tRNA ligase cytoplasmic
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d053196_circ_g.3 Zm00001d053196_circ_g.4 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d053196_T002:3
Zm00001d053196_T001:4
Zm00001d053196_T003:3
Zm00001d053196_T004:4

General Information
CircRNA Name	Zm00001d053196_circ_g.2
ID in PlantcircBase	zma_circ_008253
Alias	Zm04circ00094
Organism	Zea mays
Position	chr4: 219332421-219336475 JBrowse»
Reference genome	AGPv4.38
Type	ue-circRNA
Identification method	CIRI2
Parent gene	Zm00001d053196
Parent gene annotation	Proline--tRNA ligase cytoplasmic
Parent gene strand	+
Alternative splicing	Zm00001d053196_circ_g.3 Zm00001d053196_circ_g.4
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d053196_T002:3 Zm00001d053196_T001:4 Zm00001d053196_T003:3 Zm00001d053196_T004:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCGTGAAAATTACTCTCCAGGTTGGAAGTATTCCCACTGGGAAATGAAAGGTGTTCCATTGAGA
ATTGAGATTGGTCCAAAAGATCTGGCAAACAAACAGgagccgtgaatttctgtggcaagagggg
catactgcttttgcgactaaagaagaggcagatgaagaggtagaagtacatacctttgcacagt
tttgatat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 628
Transcript exons: 219332421-219332487,219332924-219333046,219333161-219333
313,219336191-219336475
GAGCCGTGAATTTCTGTGGCAAGAGGGGCATACTGCTTTTGCGACTAAAGAAGAGGCAGATGAA
GAGGTTCTCCAAATATTGGAACTGTACAGAAGGATATACGAAGAATTTTTAGCAGTTCCAGTTT
CCAAAGGGAGAAAAAGTGAGATGGAAAAATTTGCAGGTGGCCTTTATACCACCAGCGTTGAGGC
CTTCATTCCAAACACTGGTCGTGGCATACAAGGCGCAACCTCACACTGTCTTGGTCAAAACTTT
GCCAAGATGTTTGATATCACTTTTGAGAATGAGAAAGGTGTTAGGGAAATGGTTTGGCAAAACT
CTTGGGCCTACACAACCCGCTCGATTGGAGTGATGGTGATGACACATGGTGATGACAAAGGCTT
AGTATTACCACCAAAGGTGGCGCCAATCCAGGTAATTGTGATTCCAGTGCCTTATAAGGATGCT
GACACAACTGCCATAAAGGGAGCCTGCGAATCAACTGTTTACACACTCGATCAATCTGGAATTA
GAGCGGATCAGGACACCCGTGAAAATTACTCTCCAGGTTGGAAGTATTCCCACTGGGAAATGAA
AGGTGTTCCATTGAGAATTGAGATTGGTCCAAAAGATCTGGCAAACAAACAG
						
					

						Genomic sequence
						
							GAGCCGTGAATTTCTGTGGCAAGAGGGGCATACTGCTTTTGCGACTAAAGAAGAGGCAGATGAA
GAGGTAGAAGTACATACCTTTGCACAGTTTTGATATGGTTCTGTTGTCAACTACTATTATTGTG
GTGGTTTTGGTGAGTCCATTGCAGAGTATAACACAAACTATTGAGTTGGTTTTCCCAGAATTAA
GTTGTGAATATTTGAAGATATATATAGTCTGAAGCGTAACTGACCTAATGTAGTATATTAGATT
AGATAAGACTTTTGTTTAAGCAGTAATTTAGTTTTTATATTACATCCGATTGCAACTAGTGCCA
TCGTTTCACATTTGGGTAATTTAAAGTTTCATGTATTTATTTAGGTAGTTCTGCACAAAAATAA
TTTGAGCCTCTATGATGTATCAAAGGGACAGTTCAATACTGTAATAATATTCTAATATGATTTT
GTAAACATTTAAAATGGGAATGATCAGTTATTTTAATCCATGGTGATATTCTCAGGTTCTCCAA
ATATTGGAACTGTACAGAAGGATATACGAAGAATTTTTAGCAGTTCCAGTTTCCAAAGGGAGAA
AAAGTGAGATGGAAAAATTTGCAGGTGGCCTTTATACCACCAGCGTTGAGGTATTGATACATTC
CTAAAATATTGTAGCCTTTCCTTAACTAACCTGATGAAAAAAGGAAATTAATTCCAGTATTTTA
TTGTAATATGCTTGTTGCTAAATATTGTTTTACCAGGCCTTCATTCCAAACACTGGTCGTGGCA
TACAAGGCGCAACCTCACACTGTCTTGGTCAAAACTTTGCCAAGATGTTTGATATCACTTTTGA
GAATGAGAAAGGTGTTAGGGAAATGGTTTGGCAAAACTCTTGGGCCTACACAACCCGCTCGGTA
CTTCTCACTCCTTTGATTTAAGATGCATCATGCATGATTGATGTGGGGATGGGAATGATTGCTT
TCATTTTGTAGGCTGCACCTGATACTTTTGTCCATAGGTAGTCAATCACTAGCTGTTAGCATGA
GCTATATTAGGCATGGATCTTCCTATGTTTGGTAGGTCCCTTGGGTTTGGGTAGTGAGAACAAA
GTGAACCATAACATAATACATGGACCGTTACCATGTGGAGTCACTAGTGTTCATTTGGAGTTAA
GTAGTTGCACTAGCGCCACAAGGACACAAAATCAAAGGTTCATTTGCACAGCCTAGTAGCAGTC
TTAATATAGGGAAAAAGTAATATACATATTTGACTGAAGCACCCAATCTCAGCCTTTAGACCTG
CAAATAGGGATGGTAATGGATCGTGATCCAAATGTTTCTTCACAAAATGTTAGGGCCCTAAATA
AATTTTAGTTCAAAAATGAATAGAAATAGAGCCCGATCCTAATTCGATCCGATCCTTAAATCTT
ACAGTGTAAAATTTAGAGCCTATTGTCACCCAGGTTATGTTCAATTGCACATGATCCTGGTGCC
AAATACACTTGCACCTGTAGATGTATTAGGTCCTTAGTACCACCTTGACTTGATCGCAACTGTT
GTTTGATGATACGATTGTCAAGTGAAACCATGGAAATCAAGGTTTTCAAGTCGATAAGTCGAGT
CGAGTCGACAAGGTACCGACTTGGTGACTAGTCGATAAATCAGTCGACTAGTCGTCGACTTGCC
AATATAGTGGCTGTTTTGCCTATATAATGGCTTCATATAGACAATATAGCATTTATATATGAAT
AAAGAGGATGTTTTACCTCATTTGAAGCCTGAAATTGAACGAAACTGAAATAAACAGCAAGTCT
TACCTCATTTTAAGCCTCAAACTGAACCAAATCAGCCACATAAGTGATAAGTCATAAACTCGTA
AGTCATAACAGCCATATAGTTCAAATTGGAAAACAAATAGCAAGAAAATATAGTTCAAACTTGA
AAGGAAATAAGCTCCATTAGATAGCTAAGCTGCTGCTGCAGCTAGATAGATACTAGATACCCTA
AATATCTCCCAAATCAAGTCACTAGGTTCCAGCAGATTGATTCACCGGCGTGCAGACTGCAGAT
GGCCGACTAGCTAGAACAGATGAGGCGTGCGGCTGCGTGAGAGGAGGGGCGGCCGGCGGCTTGA
GAGGAAGGGCGGCCGGCGACGTGAGGACTGAGGGGCGGGCGGCTGCAGATGAGGCGTGCAGCTG
CAGATGAGGGTTAGGTTAGGGTTTAAGTTGTGTAATGGGCTGCTTGGGCTGAATTGGGGACAAG
TCGACTGACTAGCTAGAACAAGTCGACGACTAGTCGACTGAGAAATTCCAGTCATTGACAAGTC
GCCCGACTTGCCCGAAAAGTCGAGCCGGTCCCCCAAGTCGAGCTCCTATGACCGACTGGACGAC
TAGTCGACGACTTGAAAACAGGGATGGAAACTAGATATGTTTGAATTTGAACAGAAACAGGTCT
GTAAATATATTTAAGAAATACTAAATATTCTTTGATAATATACTGAGCAAGTGTATACTTTAAA
ATTTAGTTTGAACATGTTCAATATACCATGCTATCAATTTCCAAGATCAATTCATTGGGGCTAA
CTTTGCACCAGGTTTTGAAAACAGTTCACTAAAAGTTTCATGGTCTTGGACTCGGAGCCAGAAA
CCAGTGGTTGCTGGTCTATAAATCTTTGTCGCATTGCAATTTTTTTTCATATTGTTCTCTTCAA
ATCTCAATGGTCAAATAGAAACATGGAACCAGCACGTGGAGTCTTATAATCATCAAATAGAGCC
CGAAACAACAAAATGTTTGCTGAAATGTTATGTTCTCACTGAGACAATTGTTCAAGGTAGTCAC
TGTCATTTTCTGCTCCTGGCAGTACCTGGCTTACTGCTGGTAGAGAATTAGGAAATACATATCT
ATAGTCTAGTACAACTTGGAGTGCAAGTAATATAATATACATGTGTTAGGCTATACATGTCTCT
AAGGCTATCTCCAACAGATCCCCTATGCCCTTCCCTATCTTATCCCGTATTTCAAACTTCACTC
TGCAAATAGTGTTAAACAGTGTCATCTATAGTTTCGTGTCCACTGTTTTACACTACCCGCTGGA
GACAGTCTAATACCTCACAGTCATATCGGAAGGGAATTTTGGGTGCGGAGATTGGACCTAAAGC
CATTGAACAACAGAACAACTGTACATGCAATCCCTTAGTCATAATATCCATGCACTGAAGAACT
GAATGCTATGAGCTGCCCAAAAGCCACCTTCAAACGAACAAAGTGGATGCCAATGTCAATGTGC
TTCGTGCGATGATGATGAACCGAATTGTGCAGTACATGTGTTAAACTATACATATCTCTAATAC
TGCCTTCCATTTTGCGGAACACTTGTTCTGTAGTTTACTTTACTTGGATGATGGATCTGCTTAA
ATCATGTACAACCAGCTTCTCATTATAGCTTTACATGTCATTGCAAGTTCTCCCATATGAACCT
AGGTCTTTTGCCTTCCCTGATCTCTCCCTCCCAGAGAAAATCCCCATCCCATTGAAGCAAAAAG
AAAATTTGAAATTTCTAGCGACGACATGCATTTTTTTAAAAAACATCACATGTTGCATTGAAAC
AAAGCTTTTCCCCTCCCCTTTCTCTGTCTTTCTCTTTTTGGCAACTTGTTGGGTTTTAACTCTA
GCCTACCCCAACTTGCTTGGGACTAAAAGGCTATGTTGATGTTGATGTTGTATTTCCAGTTGCA
TAGTGTTATGCACAAATTATGTTTATGTTTGTAATATATTGAACCTACACCCTTGCAGATTGGA
GTGATGGTGATGACACATGGTGATGACAAAGGCTTAGTATTACCACCAAAGGTGGCGCCAATCC
AGGTAATTGTGATTCCAGTGCCTTATAAGGATGCTGACACAACTGCCATAAAGGGAGCCTGCGA
ATCAACTGTTTACACACTCGATCAATCTGGAATTAGAGCGGATCAGGACACCCGTGAAAATTAC
TCTCCAGGTTGGAAGTATTCCCACTGGGAAATGAAAGGTGTTCCATTGAGAATTGAGATTGGTC
CAAAAGATCTGGCAAACAAACAG
						
					

			
		

Sequences
Splice junction sequence	CCGTGAAAATTACTCTCCAGGTTGGAAGTATTCCCACTGGGAAATGAAAGGTGTTCCATTGAGA ATTGAGATTGGTCCAAAAGATCTGGCAAACAAACAGgagccgtgaatttctgtggcaagagggg catactgcttttgcgactaaagaagaggcagatgaagaggtagaagtacatacctttgcacagt tttgatat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 628 Transcript exons: 219332421-219332487,219332924-219333046,219333161-219333 313,219336191-219336475 GAGCCGTGAATTTCTGTGGCAAGAGGGGCATACTGCTTTTGCGACTAAAGAAGAGGCAGATGAA GAGGTTCTCCAAATATTGGAACTGTACAGAAGGATATACGAAGAATTTTTAGCAGTTCCAGTTT CCAAAGGGAGAAAAAGTGAGATGGAAAAATTTGCAGGTGGCCTTTATACCACCAGCGTTGAGGC CTTCATTCCAAACACTGGTCGTGGCATACAAGGCGCAACCTCACACTGTCTTGGTCAAAACTTT GCCAAGATGTTTGATATCACTTTTGAGAATGAGAAAGGTGTTAGGGAAATGGTTTGGCAAAACT CTTGGGCCTACACAACCCGCTCGATTGGAGTGATGGTGATGACACATGGTGATGACAAAGGCTT AGTATTACCACCAAAGGTGGCGCCAATCCAGGTAATTGTGATTCCAGTGCCTTATAAGGATGCT GACACAACTGCCATAAAGGGAGCCTGCGAATCAACTGTTTACACACTCGATCAATCTGGAATTA GAGCGGATCAGGACACCCGTGAAAATTACTCTCCAGGTTGGAAGTATTCCCACTGGGAAATGAA AGGTGTTCCATTGAGAATTGAGATTGGTCCAAAAGATCTGGCAAACAAACAG
Genomic sequence	GAGCCGTGAATTTCTGTGGCAAGAGGGGCATACTGCTTTTGCGACTAAAGAAGAGGCAGATGAA GAGGTAGAAGTACATACCTTTGCACAGTTTTGATATGGTTCTGTTGTCAACTACTATTATTGTG GTGGTTTTGGTGAGTCCATTGCAGAGTATAACACAAACTATTGAGTTGGTTTTCCCAGAATTAA GTTGTGAATATTTGAAGATATATATAGTCTGAAGCGTAACTGACCTAATGTAGTATATTAGATT AGATAAGACTTTTGTTTAAGCAGTAATTTAGTTTTTATATTACATCCGATTGCAACTAGTGCCA TCGTTTCACATTTGGGTAATTTAAAGTTTCATGTATTTATTTAGGTAGTTCTGCACAAAAATAA TTTGAGCCTCTATGATGTATCAAAGGGACAGTTCAATACTGTAATAATATTCTAATATGATTTT GTAAACATTTAAAATGGGAATGATCAGTTATTTTAATCCATGGTGATATTCTCAGGTTCTCCAA ATATTGGAACTGTACAGAAGGATATACGAAGAATTTTTAGCAGTTCCAGTTTCCAAAGGGAGAA AAAGTGAGATGGAAAAATTTGCAGGTGGCCTTTATACCACCAGCGTTGAGGTATTGATACATTC CTAAAATATTGTAGCCTTTCCTTAACTAACCTGATGAAAAAAGGAAATTAATTCCAGTATTTTA TTGTAATATGCTTGTTGCTAAATATTGTTTTACCAGGCCTTCATTCCAAACACTGGTCGTGGCA TACAAGGCGCAACCTCACACTGTCTTGGTCAAAACTTTGCCAAGATGTTTGATATCACTTTTGA GAATGAGAAAGGTGTTAGGGAAATGGTTTGGCAAAACTCTTGGGCCTACACAACCCGCTCGGTA CTTCTCACTCCTTTGATTTAAGATGCATCATGCATGATTGATGTGGGGATGGGAATGATTGCTT TCATTTTGTAGGCTGCACCTGATACTTTTGTCCATAGGTAGTCAATCACTAGCTGTTAGCATGA GCTATATTAGGCATGGATCTTCCTATGTTTGGTAGGTCCCTTGGGTTTGGGTAGTGAGAACAAA GTGAACCATAACATAATACATGGACCGTTACCATGTGGAGTCACTAGTGTTCATTTGGAGTTAA GTAGTTGCACTAGCGCCACAAGGACACAAAATCAAAGGTTCATTTGCACAGCCTAGTAGCAGTC TTAATATAGGGAAAAAGTAATATACATATTTGACTGAAGCACCCAATCTCAGCCTTTAGACCTG CAAATAGGGATGGTAATGGATCGTGATCCAAATGTTTCTTCACAAAATGTTAGGGCCCTAAATA AATTTTAGTTCAAAAATGAATAGAAATAGAGCCCGATCCTAATTCGATCCGATCCTTAAATCTT ACAGTGTAAAATTTAGAGCCTATTGTCACCCAGGTTATGTTCAATTGCACATGATCCTGGTGCC AAATACACTTGCACCTGTAGATGTATTAGGTCCTTAGTACCACCTTGACTTGATCGCAACTGTT GTTTGATGATACGATTGTCAAGTGAAACCATGGAAATCAAGGTTTTCAAGTCGATAAGTCGAGT CGAGTCGACAAGGTACCGACTTGGTGACTAGTCGATAAATCAGTCGACTAGTCGTCGACTTGCC AATATAGTGGCTGTTTTGCCTATATAATGGCTTCATATAGACAATATAGCATTTATATATGAAT AAAGAGGATGTTTTACCTCATTTGAAGCCTGAAATTGAACGAAACTGAAATAAACAGCAAGTCT TACCTCATTTTAAGCCTCAAACTGAACCAAATCAGCCACATAAGTGATAAGTCATAAACTCGTA AGTCATAACAGCCATATAGTTCAAATTGGAAAACAAATAGCAAGAAAATATAGTTCAAACTTGA AAGGAAATAAGCTCCATTAGATAGCTAAGCTGCTGCTGCAGCTAGATAGATACTAGATACCCTA AATATCTCCCAAATCAAGTCACTAGGTTCCAGCAGATTGATTCACCGGCGTGCAGACTGCAGAT GGCCGACTAGCTAGAACAGATGAGGCGTGCGGCTGCGTGAGAGGAGGGGCGGCCGGCGGCTTGA GAGGAAGGGCGGCCGGCGACGTGAGGACTGAGGGGCGGGCGGCTGCAGATGAGGCGTGCAGCTG CAGATGAGGGTTAGGTTAGGGTTTAAGTTGTGTAATGGGCTGCTTGGGCTGAATTGGGGACAAG TCGACTGACTAGCTAGAACAAGTCGACGACTAGTCGACTGAGAAATTCCAGTCATTGACAAGTC GCCCGACTTGCCCGAAAAGTCGAGCCGGTCCCCCAAGTCGAGCTCCTATGACCGACTGGACGAC TAGTCGACGACTTGAAAACAGGGATGGAAACTAGATATGTTTGAATTTGAACAGAAACAGGTCT GTAAATATATTTAAGAAATACTAAATATTCTTTGATAATATACTGAGCAAGTGTATACTTTAAA ATTTAGTTTGAACATGTTCAATATACCATGCTATCAATTTCCAAGATCAATTCATTGGGGCTAA CTTTGCACCAGGTTTTGAAAACAGTTCACTAAAAGTTTCATGGTCTTGGACTCGGAGCCAGAAA CCAGTGGTTGCTGGTCTATAAATCTTTGTCGCATTGCAATTTTTTTTCATATTGTTCTCTTCAA ATCTCAATGGTCAAATAGAAACATGGAACCAGCACGTGGAGTCTTATAATCATCAAATAGAGCC CGAAACAACAAAATGTTTGCTGAAATGTTATGTTCTCACTGAGACAATTGTTCAAGGTAGTCAC TGTCATTTTCTGCTCCTGGCAGTACCTGGCTTACTGCTGGTAGAGAATTAGGAAATACATATCT ATAGTCTAGTACAACTTGGAGTGCAAGTAATATAATATACATGTGTTAGGCTATACATGTCTCT AAGGCTATCTCCAACAGATCCCCTATGCCCTTCCCTATCTTATCCCGTATTTCAAACTTCACTC TGCAAATAGTGTTAAACAGTGTCATCTATAGTTTCGTGTCCACTGTTTTACACTACCCGCTGGA GACAGTCTAATACCTCACAGTCATATCGGAAGGGAATTTTGGGTGCGGAGATTGGACCTAAAGC CATTGAACAACAGAACAACTGTACATGCAATCCCTTAGTCATAATATCCATGCACTGAAGAACT GAATGCTATGAGCTGCCCAAAAGCCACCTTCAAACGAACAAAGTGGATGCCAATGTCAATGTGC TTCGTGCGATGATGATGAACCGAATTGTGCAGTACATGTGTTAAACTATACATATCTCTAATAC TGCCTTCCATTTTGCGGAACACTTGTTCTGTAGTTTACTTTACTTGGATGATGGATCTGCTTAA ATCATGTACAACCAGCTTCTCATTATAGCTTTACATGTCATTGCAAGTTCTCCCATATGAACCT AGGTCTTTTGCCTTCCCTGATCTCTCCCTCCCAGAGAAAATCCCCATCCCATTGAAGCAAAAAG AAAATTTGAAATTTCTAGCGACGACATGCATTTTTTTAAAAAACATCACATGTTGCATTGAAAC AAAGCTTTTCCCCTCCCCTTTCTCTGTCTTTCTCTTTTTGGCAACTTGTTGGGTTTTAACTCTA GCCTACCCCAACTTGCTTGGGACTAAAAGGCTATGTTGATGTTGATGTTGTATTTCCAGTTGCA TAGTGTTATGCACAAATTATGTTTATGTTTGTAATATATTGAACCTACACCCTTGCAGATTGGA GTGATGGTGATGACACATGGTGATGACAAAGGCTTAGTATTACCACCAAAGGTGGCGCCAATCC AGGTAATTGTGATTCCAGTGCCTTATAAGGATGCTGACACAACTGCCATAAAGGGAGCCTGCGA ATCAACTGTTTACACACTCGATCAATCTGGAATTAGAGCGGATCAGGACACCCGTGAAAATTAC TCTCCAGGTTGGAAGTATTCCCACTGGGAAATGAAAGGTGTTCCATTGAGAATTGAGATTGGTC CAAAAGATCTGGCAAACAAACAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.148952756

Conservation Information
Conserved circRNAs	NA
PMCS	0.148952756

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							219333006-219332426(+)
219332453-219336359(-)
						
						Potential amino acid sequence
						
							MEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAKMFDITFENEKGVREMVWQNSWAYTTR
SIGVMVMTHGDDKGLVLPPKVAPIQVIVIPVPYKDADTTAIKGACESTVYTLDQSGIRADQDTR
ENYSPGWKYSHWEMKGVPLRIEIGPKDLANKQEP*(+)
MPLLPQKFTAPVCLPDLLDQSQFSMEHLSFPSGNTSNLESNFHGCPDPL*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	219333006-219332426(+) 219332453-219336359(-)
Potential amino acid sequence	MEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAKMFDITFENEKGVREMVWQNSWAYTTR SIGVMVMTHGDDKGLVLPPKVAPIQVIVIPVPYKDADTTAIKGACESTVYTLDQSGIRADQDTR ENYSPGWKYSHWEMKGVPLRIEIGPKDLANKQEP(+) MPLLPQKFTAPVCLPDLLDQSQFSMEHLSFPSGNTSNLESNFHGCPDPL(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d053196_circ_g.2

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