Plant Circular RNA Database

Detail information of orai.009G185700_circ_g.2

			
						 General Information
					
						CircRNA Name
						orai.009G185700_circ_g.2
					
						ID in PlantcircBase
						gra_circ_000951
					
						Alias
						Chr09:14281684|14285916
					
						Organism
						
							Gossypium raimondii						
					
						Position
						
							chrChr09: 14281684-14285916  JBrowse»						
					
						Reference genome
						
							Graimondii_221						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Gorai.009G185700						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							orai.009G185700_circ_g.1 orai.009G185700_circ_g.3 						
					
						Support reads
						2
					
						Tissues
						ovule
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Gorai.009G185700.2:14
Gorai.009G185700.1:14
Gorai.009G185700.4:14
Gorai.009G185700.3:13

General Information
CircRNA Name	orai.009G185700_circ_g.2
ID in PlantcircBase	gra_circ_000951
Alias	Chr09:14281684\|14285916
Organism	Gossypium raimondii
Position	chrChr09: 14281684-14285916 JBrowse»
Reference genome	Graimondii_221
Type	ue-circRNA
Identification method	CIRI
Parent gene	Gorai.009G185700
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	orai.009G185700_circ_g.1 orai.009G185700_circ_g.3
Support reads	2
Tissues	ovule
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Gorai.009G185700.2:14 Gorai.009G185700.1:14 Gorai.009G185700.4:14 Gorai.009G185700.3:13

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTACAGGCTAGCTCGCTATGCCATCAACATTTCTTTAGGCACTGTCCTCAAATCTCACTTGAAA
GACATATCAACAAATTTGGCTAGATCACTTAGTAAGggtgagctggagggagaagaaagaaggc
gactggaggagttgctcgaaagcaatcccgatgactcttcccttcattttcaacttgtaagctg
taaataag

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1731
Transcript exons: 14281684-14281767,14281898-14282098,14282198-14282320,14
282413-14282496,14282595-14282645,14283075-14283167,1428
3617-14283757,14283854-14283934,14284090-14284337,142844
21-14284592,14284984-14285099,14285194-14285251,14285454
-14285519,14285704-14285916
GGTGAGCTGGAGGGAGAAGAAAGAAGGCGACTGGAGGAGTTGCTCGAAAGCAATCCCGATGACT
CTTCCCTTCATTTTCAACTTGGAGTATGCTTGTGGGAGACTCAGACGGAGAAAGAGAAAGCGGC
GGAGCATTGGGTGATTTCCGTTAAACAAAACCCTAAGAACGCAGCTGCCTTTACCTACTTGGGC
CATTACTACGCCACCGTTTCGGTCGATATCCCCAGAGCCATCAAGTGTTACCAGCGAGCTTTAT
CCCTTAATCCCGATGATTCCGATTCTGGGGAAGCTTTGTGTGATTTGTTGGATAGTCAAGGCAA
GGAGACCTTGGAGGTTGCAATTTGCAAAGATGCTTCTCACAACTCTCCCAGGGCTTTCTGGGCT
TTCCGCCGATTGGGTTTTCTCCAGGTGCATCAAAAGAAATGGTCTGAAGCTGTACAAAGTCTTC
AACAAGCTATTCGGGGCTATCCGACTTCTCCTGATTTGTGGGAAGCTCTTGGTCTTGCCTACCA
CCGGCTTGGCATGTTTACTGCTGCTATTAAGTCCTATTCACGTGCAATTGAATTGGAAGATACA
AGAGTCTTTGCGCTAATTGAATGTGGAAACATCTTTTTGATGCTTGGTTCCTTTAGAAAGGGAA
TTGAACAATTTCAGCAAGCACTAAAGATCTCGCTACAAAACATGTCTGCACTCTATGGACTTGC
GTCTGGACTGCTAGGTATGGCAAAAGAATGTAGAAATTCAGGAGCGTTCAGATGGGCAGCTTCA
TTATTAGAGGATGCACGTAAAGTTGCAGAAGCTAGCATCAAATCAGCTGGAAATTCATCATGTA
CATGGAAGTTGCATGGTGATATTCTGCTTACATATGCACAAGTTTTTCCATGGACAGAGGAGAG
CCAGGGTTTAGAATACAATGCAGAAACTTTCAAGAACTCCGTATATTCATGGAAGAATACCTGT
GGTTTGGCTGCTATATCTGCCAGAAACTCTTATCAACGAGCTTTGCACTTAGCTCCATGGCAGG
CTAATATCTACATTGACATTGCAATTAGTTCTAATCTTATCTCTTCTTTCAATCAGGATAACAC
ACTTGATAAGTGTACTTGGAAGTTACCCGAGAAGTTGACACTGGGGGCTTTAGCACTAGAGGGT
GAGAACTCTGAGTTCTGGGTGGCTTTGAGCTGTTTGTCTGAGTGTAATGCACTTAAGCAGCACT
CGTTAATCAGGGGACTGCAGTTGGATGTGTCTTTAGCCTATGCTTGGGCATATCTTGGAAAGCT
TTATAGAGAAGAGAATGAGAAGAAATTGGCTAGGCAAGCATTTGACTGTGCTAGAGGTATAGAT
CCATCGCTGGCATTACCATGGGCTGGGATGTCAGCTGATGCTCATACTGGGGATTCAACACCAG
ATGATGCTTTTGAGAGCTGCCTACGTGCTGTGGAGATATTTCCGCTTGCAGAGTTCCAAATTGG
ACTTGCTAAGCTTGCTTTACTTTCTGGGAACCTTTCTTCTTCGCAGGTATTTGGAGCTATCCAG
CAGGCTGTGCAACGGGCACCGCACTACCACGAATCCCATAATTTATATGGGCTAGTTCACGAGG
CACGTATGCAGTTTCAAGCTGCCATTGCTTCTTACAGGCTAGCTCGCTATGCCATCAACATTTC
TTTAGGCACTGTCCTCAAATCTCACTTGAAAGACATATCAACAAATTTGGCTAGATCACTTAGT
AAG
						
					

						Genomic sequence
						
							GGTGAGCTGGAGGGAGAAGAAAGAAGGCGACTGGAGGAGTTGCTCGAAAGCAATCCCGATGACT
CTTCCCTTCATTTTCAACTTGTAAGCTGTAAATAAGAAGAAGAATAATAGCAATTATTGGTTCC
TTTCTGTTTCCTTGTTTGTGCGGGTGTTTGTTCTGAGCTAATATCGGTACTAACAGAAGAAATG
CACATGTGATTTTGCACTGCAGGGAGTATGCTTGTGGGAGACTCAGACGGAGAAAGAGAAAGCG
GCGGAGCATTGGGTGATTTCCGTTAAACAAAACCCTAAGAACGCAGCTGCCTTTACCTACTTGG
GCCATTACTACGCCACCGTTTCGGTCGATATCCCCAGAGCCATCAAGTGTTACCAGCGAGCTTT
ATCCCTTAATCCCGATGATTCCGATTCTGGGGTATCTATATTCCTCCTCCTCCTCCTCCCCTTC
CATATTTTTCTCTTTCGTTTTCTTTCTTCTTGGATTGACCTTAAATGAAATAAAACACGCCTAC
AGGAAGCTTTGTGTGATTTGTTGGATAGTCAAGGCAAGGAGACCTTGGAGGTTGCAATTTGCAA
AGATGCTTCTCACAACTCTCCCAGGGCTTTCTGGGCTTTCCGCCGATTGGGTTTTCTCCAGGTT
TTCTTTTTTTCTTTTATCACTCGAAAGAATTGATTTTTTTTATAGTTTTTTTTTATTGGTGTGC
ATCTGCATTCATCAAATTGGAGCAGGTGCATCAAAAGAAATGGTCTGAAGCTGTACAAAGTCTT
CAACAAGCTATTCGGGGCTATCCGACTTCTCCTGATTTGTGGGAAGTAAGTTTTTCATTTAATT
CTACCATCTACCTGTTCTGTTTTCAAAATGCTGTTTAATTTTGTTCACCCTTTTCTAATAATAA
CTAATTGTCTTCTAGGCTCTTGGTCTTGCCTACCACCGGCTTGGCATGTTTACTGCTGCTATTA
AGGTATTTCACTTTCCTTTCACCTTTTAAACTCATTTTTACCTTTACTTTCCCCTTTTCTATTT
GGAGCAATATACTCTCCTAAACTTATTCAGTATGTGATTCGCATATCAAATGTGGAATTTGGGC
AAGAAAGCAATAAACTTGAATGCCCTCATCAGATAATGCTACATAATGCTACTATCTCTCGTGC
TTAACTTGGAAATACTTGAAAACAAGCAGTTAACTGCATGCTGTTTTCTCGTGGACAAATGAAC
ATGTAGAAAGCAAGACAGTCCATTCATTTTCGATATTTTCTTATTTGTCTAAATCATATCTATG
CTCACCATAACCAACGTTCATCTTCAGCTGTCTAAAGAATTCTTTCATAAATTTATCTGCTGGG
TCCTATATAACCATTGAGCAATTAATTTATTGTGGCATTTTTAACAGTCCTATTCACGTGCAAT
TGAATTGGAAGATACAAGAGTCTTTGCGCTAATTGAATGTGGAAACATCTTTTTGATGCTTGGT
TCCTTTAGAAAGGTAAAACCTTTTTGTTATGTTTTCCCTTCTAACTCACTGAATGTCATTACCT
TTTAATTTTATGAGATAGAACCTACCTTTTCACTTTTTAAGCAATATCCATGTGATAGCTTAGA
GTTAAAGTTAATCTCAATGGGATCTTATGAGGCAGTAGTTATGAAATGTTTCACAGTTAGCTAT
CGATATCCTTTTTTGGCTCAAAATTAGGAATTTATTCCGTTTATTGATTCTTCATTCAATCATT
TGACAAGCGAGTCTATTGAAATCTTGTGTGCTCTAATGAAATGTTTCACAGTTAGCTATTGATA
TCCTTTTAATTCATTCCTTTTTTGGAGTGCTCACGGATGTTAATCTGACAAGCTATGATTTTCA
TTTATTGCACTACTCATCACACACTCTTTATGAAATGATGACAATCGTGTGTGGTAACATTGTC
TTTGTTCATCAAGGGAATTGAACAATTTCAGCAAGCACTAAAGATCTCGCTACAAAACATGTCT
GCACTCTATGGACTTGCGTCTGGACTGCTAGGTATGGCAAAAGAATGTAGAAATTCAGGAGCGT
TCAGATGGGCAGCTTCATTATTAGAGGTTAGTCATCTTTCAGTTTGATTGAATGGCTTGTAACT
TTTATGACAGAAAAAGACAAGAATATAATATTAATATTTTGGTACTGGATTGTCACAGGATGCA
CGTAAAGTTGCAGAAGCTAGCATCAAATCAGCTGGAAATTCATCATGTACATGGAAGTTGCATG
GTGATATTCTGGTAAATAATCTATATTTAGCCCTTAGATGTACCTTGATTTTTTTTTTTTGGGG
GTGGGAGGCTTTTTCTTTTGGTGGGGTGGGGCCATATTTTTTGCAACCCTATTTTTGAAACATG
ACTGATTCAATTTTGAGGGATATTCTTCTCCTGGCCAGCTTACATATGCACAAGTTTTTCCATG
GACAGAGGAGAGCCAGGGTTTAGAATACAATGCAGAAACTTTCAAGAACTCCGTATATTCATGG
AAGAATACCTGTGGTTTGGCTGCTATATCTGCCAGAAACTCTTATCAACGAGCTTTGCACTTAG
CTCCATGGCAGGCTAATATCTACATTGACATTGCAATTAGTTCTAATCTTATCTCTTCTTTCAA
TCAGGATAACACACTTGATAAGTGTACTTGGTAAGATCTTAGGTGGTTTTCTTTACAGAACCGT
TTCATGCTCCTGCAGATTTGCTCTTTTGACTTACTATCTTTTTTATCAGGAAGTTACCCGAGAA
GTTGACACTGGGGGCTTTAGCACTAGAGGGTGAGAACTCTGAGTTCTGGGTGGCTTTGAGCTGT
TTGTCTGAGTGTAATGCACTTAAGCAGCACTCGTTAATCAGGGGACTGCAGTTGGATGTGTCTT
TAGCCTATGCTTGGGCATATCTTGGAAAGGTACCATCCGCTTATTTTATTTTCCTGGATTTAGA
TTGTAATTTGAAAATAAATGAAACCAACTCTGTTATTTATTTATGAATTGACTAATATTGCATT
TACAATGTGTTTAGTATGTAGAAAAATAAATCCTGTATAGGCAGGCCATATTCTATGGGAAGAA
TGTTAACGATTTCAGATGTCATATTCAATAGATGGTTAGTAGTTGCTGTGTTAGAAGTCACTTT
CTATGGATGGTCAGGAGCTTGAAAAATGTGCAATTCTTAGCTTAAATGCAACCCTAAGGTTAAC
CTTTGAAGTGTGTGCTTAAACTTGTCTTGATCAACTCTTGTTGTTAAGAGTCTAATTGTTGATG
CCTTGATGGGTATCTACCGCCTCTATATTTTGGCAGCTTTATAGAGAAGAGAATGAGAAGAAAT
TGGCTAGGCAAGCATTTGACTGTGCTAGAGGTATAGATCCATCGCTGGCATTACCATGGGCTGG
GATGTCAGCTGATGCTCATACTGGGTAAGTTTTTTACTTTTTTCTGTTTACAAAAATATTTAGA
AATGATTTGTCGGTTAATAGTCATATCAATACTGAACCATACTTAATTTTTTAGGGATTCAACA
CCAGATGATGCTTTTGAGAGCTGCCTACGTGCTGTGGAGATATTTCCGGTAAGTGTTGATATCA
CGTTTTATGCTCTTCCCAAGGTATGAAATTAACCTTGAATTAATTGTTTGCTGCATAATCCTGT
ACGGTCAGCAAAGAAATTGAGGCCGTAACCATATCCTACCAGAGCAGTTTTAACTGCTGGGCTT
GACCTGCATTCTACAAATACTTTATGCAACTGTAATCTGATCTTTGCTTTATTTGCAGCTTGCA
GAGTTCCAAATTGGACTTGCTAAGCTTGCTTTACTTTCTGGGAACCTTTCTTCTTCGCAGGTAT
TGTAGCTAAAATGTTACAGCACATCATCTTCATAAAAAATAAGAAAAAAACACACGAGAAAGTC
AACCGCAAAAATATTTGAAGCATACCACTATCTGGGAAAGATATACCTGTAGCAACAACTGATA
AGAACCATGCTTTAACAAGTATTTGTGTGATAGTTCTAGTGTTTTATAACAGGTATTTGGAGCT
ATCCAGCAGGCTGTGCAACGGGCACCGCACTACCACGAATCCCATAATTTATATGGGCTAGTTC
ACGAGGCACGTATGCAGTTTCAAGCTGCCATTGCTTCTTACAGGCTAGCTCGCTATGCCATCAA
CATTTCTTTAGGCACTGTCCTCAAATCTCACTTGAAAGACATATCAACAAATTTGGCTAGATCA
CTTAGTAAG
						
					

			
		

Sequences
Splice junction sequence	TTACAGGCTAGCTCGCTATGCCATCAACATTTCTTTAGGCACTGTCCTCAAATCTCACTTGAAA GACATATCAACAAATTTGGCTAGATCACTTAGTAAGggtgagctggagggagaagaaagaaggc gactggaggagttgctcgaaagcaatcccgatgactcttcccttcattttcaacttgtaagctg taaataag
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1731 Transcript exons: 14281684-14281767,14281898-14282098,14282198-14282320,14 282413-14282496,14282595-14282645,14283075-14283167,1428 3617-14283757,14283854-14283934,14284090-14284337,142844 21-14284592,14284984-14285099,14285194-14285251,14285454 -14285519,14285704-14285916 GGTGAGCTGGAGGGAGAAGAAAGAAGGCGACTGGAGGAGTTGCTCGAAAGCAATCCCGATGACT CTTCCCTTCATTTTCAACTTGGAGTATGCTTGTGGGAGACTCAGACGGAGAAAGAGAAAGCGGC GGAGCATTGGGTGATTTCCGTTAAACAAAACCCTAAGAACGCAGCTGCCTTTACCTACTTGGGC CATTACTACGCCACCGTTTCGGTCGATATCCCCAGAGCCATCAAGTGTTACCAGCGAGCTTTAT CCCTTAATCCCGATGATTCCGATTCTGGGGAAGCTTTGTGTGATTTGTTGGATAGTCAAGGCAA GGAGACCTTGGAGGTTGCAATTTGCAAAGATGCTTCTCACAACTCTCCCAGGGCTTTCTGGGCT TTCCGCCGATTGGGTTTTCTCCAGGTGCATCAAAAGAAATGGTCTGAAGCTGTACAAAGTCTTC AACAAGCTATTCGGGGCTATCCGACTTCTCCTGATTTGTGGGAAGCTCTTGGTCTTGCCTACCA CCGGCTTGGCATGTTTACTGCTGCTATTAAGTCCTATTCACGTGCAATTGAATTGGAAGATACA AGAGTCTTTGCGCTAATTGAATGTGGAAACATCTTTTTGATGCTTGGTTCCTTTAGAAAGGGAA TTGAACAATTTCAGCAAGCACTAAAGATCTCGCTACAAAACATGTCTGCACTCTATGGACTTGC GTCTGGACTGCTAGGTATGGCAAAAGAATGTAGAAATTCAGGAGCGTTCAGATGGGCAGCTTCA TTATTAGAGGATGCACGTAAAGTTGCAGAAGCTAGCATCAAATCAGCTGGAAATTCATCATGTA CATGGAAGTTGCATGGTGATATTCTGCTTACATATGCACAAGTTTTTCCATGGACAGAGGAGAG CCAGGGTTTAGAATACAATGCAGAAACTTTCAAGAACTCCGTATATTCATGGAAGAATACCTGT GGTTTGGCTGCTATATCTGCCAGAAACTCTTATCAACGAGCTTTGCACTTAGCTCCATGGCAGG CTAATATCTACATTGACATTGCAATTAGTTCTAATCTTATCTCTTCTTTCAATCAGGATAACAC ACTTGATAAGTGTACTTGGAAGTTACCCGAGAAGTTGACACTGGGGGCTTTAGCACTAGAGGGT GAGAACTCTGAGTTCTGGGTGGCTTTGAGCTGTTTGTCTGAGTGTAATGCACTTAAGCAGCACT CGTTAATCAGGGGACTGCAGTTGGATGTGTCTTTAGCCTATGCTTGGGCATATCTTGGAAAGCT TTATAGAGAAGAGAATGAGAAGAAATTGGCTAGGCAAGCATTTGACTGTGCTAGAGGTATAGAT CCATCGCTGGCATTACCATGGGCTGGGATGTCAGCTGATGCTCATACTGGGGATTCAACACCAG ATGATGCTTTTGAGAGCTGCCTACGTGCTGTGGAGATATTTCCGCTTGCAGAGTTCCAAATTGG ACTTGCTAAGCTTGCTTTACTTTCTGGGAACCTTTCTTCTTCGCAGGTATTTGGAGCTATCCAG CAGGCTGTGCAACGGGCACCGCACTACCACGAATCCCATAATTTATATGGGCTAGTTCACGAGG CACGTATGCAGTTTCAAGCTGCCATTGCTTCTTACAGGCTAGCTCGCTATGCCATCAACATTTC TTTAGGCACTGTCCTCAAATCTCACTTGAAAGACATATCAACAAATTTGGCTAGATCACTTAGT AAG
Genomic sequence	GGTGAGCTGGAGGGAGAAGAAAGAAGGCGACTGGAGGAGTTGCTCGAAAGCAATCCCGATGACT CTTCCCTTCATTTTCAACTTGTAAGCTGTAAATAAGAAGAAGAATAATAGCAATTATTGGTTCC TTTCTGTTTCCTTGTTTGTGCGGGTGTTTGTTCTGAGCTAATATCGGTACTAACAGAAGAAATG CACATGTGATTTTGCACTGCAGGGAGTATGCTTGTGGGAGACTCAGACGGAGAAAGAGAAAGCG GCGGAGCATTGGGTGATTTCCGTTAAACAAAACCCTAAGAACGCAGCTGCCTTTACCTACTTGG GCCATTACTACGCCACCGTTTCGGTCGATATCCCCAGAGCCATCAAGTGTTACCAGCGAGCTTT ATCCCTTAATCCCGATGATTCCGATTCTGGGGTATCTATATTCCTCCTCCTCCTCCTCCCCTTC CATATTTTTCTCTTTCGTTTTCTTTCTTCTTGGATTGACCTTAAATGAAATAAAACACGCCTAC AGGAAGCTTTGTGTGATTTGTTGGATAGTCAAGGCAAGGAGACCTTGGAGGTTGCAATTTGCAA AGATGCTTCTCACAACTCTCCCAGGGCTTTCTGGGCTTTCCGCCGATTGGGTTTTCTCCAGGTT TTCTTTTTTTCTTTTATCACTCGAAAGAATTGATTTTTTTTATAGTTTTTTTTTATTGGTGTGC ATCTGCATTCATCAAATTGGAGCAGGTGCATCAAAAGAAATGGTCTGAAGCTGTACAAAGTCTT CAACAAGCTATTCGGGGCTATCCGACTTCTCCTGATTTGTGGGAAGTAAGTTTTTCATTTAATT CTACCATCTACCTGTTCTGTTTTCAAAATGCTGTTTAATTTTGTTCACCCTTTTCTAATAATAA CTAATTGTCTTCTAGGCTCTTGGTCTTGCCTACCACCGGCTTGGCATGTTTACTGCTGCTATTA AGGTATTTCACTTTCCTTTCACCTTTTAAACTCATTTTTACCTTTACTTTCCCCTTTTCTATTT GGAGCAATATACTCTCCTAAACTTATTCAGTATGTGATTCGCATATCAAATGTGGAATTTGGGC AAGAAAGCAATAAACTTGAATGCCCTCATCAGATAATGCTACATAATGCTACTATCTCTCGTGC TTAACTTGGAAATACTTGAAAACAAGCAGTTAACTGCATGCTGTTTTCTCGTGGACAAATGAAC ATGTAGAAAGCAAGACAGTCCATTCATTTTCGATATTTTCTTATTTGTCTAAATCATATCTATG CTCACCATAACCAACGTTCATCTTCAGCTGTCTAAAGAATTCTTTCATAAATTTATCTGCTGGG TCCTATATAACCATTGAGCAATTAATTTATTGTGGCATTTTTAACAGTCCTATTCACGTGCAAT TGAATTGGAAGATACAAGAGTCTTTGCGCTAATTGAATGTGGAAACATCTTTTTGATGCTTGGT TCCTTTAGAAAGGTAAAACCTTTTTGTTATGTTTTCCCTTCTAACTCACTGAATGTCATTACCT TTTAATTTTATGAGATAGAACCTACCTTTTCACTTTTTAAGCAATATCCATGTGATAGCTTAGA GTTAAAGTTAATCTCAATGGGATCTTATGAGGCAGTAGTTATGAAATGTTTCACAGTTAGCTAT CGATATCCTTTTTTGGCTCAAAATTAGGAATTTATTCCGTTTATTGATTCTTCATTCAATCATT TGACAAGCGAGTCTATTGAAATCTTGTGTGCTCTAATGAAATGTTTCACAGTTAGCTATTGATA TCCTTTTAATTCATTCCTTTTTTGGAGTGCTCACGGATGTTAATCTGACAAGCTATGATTTTCA TTTATTGCACTACTCATCACACACTCTTTATGAAATGATGACAATCGTGTGTGGTAACATTGTC TTTGTTCATCAAGGGAATTGAACAATTTCAGCAAGCACTAAAGATCTCGCTACAAAACATGTCT GCACTCTATGGACTTGCGTCTGGACTGCTAGGTATGGCAAAAGAATGTAGAAATTCAGGAGCGT TCAGATGGGCAGCTTCATTATTAGAGGTTAGTCATCTTTCAGTTTGATTGAATGGCTTGTAACT TTTATGACAGAAAAAGACAAGAATATAATATTAATATTTTGGTACTGGATTGTCACAGGATGCA CGTAAAGTTGCAGAAGCTAGCATCAAATCAGCTGGAAATTCATCATGTACATGGAAGTTGCATG GTGATATTCTGGTAAATAATCTATATTTAGCCCTTAGATGTACCTTGATTTTTTTTTTTTGGGG GTGGGAGGCTTTTTCTTTTGGTGGGGTGGGGCCATATTTTTTGCAACCCTATTTTTGAAACATG ACTGATTCAATTTTGAGGGATATTCTTCTCCTGGCCAGCTTACATATGCACAAGTTTTTCCATG GACAGAGGAGAGCCAGGGTTTAGAATACAATGCAGAAACTTTCAAGAACTCCGTATATTCATGG AAGAATACCTGTGGTTTGGCTGCTATATCTGCCAGAAACTCTTATCAACGAGCTTTGCACTTAG CTCCATGGCAGGCTAATATCTACATTGACATTGCAATTAGTTCTAATCTTATCTCTTCTTTCAA TCAGGATAACACACTTGATAAGTGTACTTGGTAAGATCTTAGGTGGTTTTCTTTACAGAACCGT TTCATGCTCCTGCAGATTTGCTCTTTTGACTTACTATCTTTTTTATCAGGAAGTTACCCGAGAA GTTGACACTGGGGGCTTTAGCACTAGAGGGTGAGAACTCTGAGTTCTGGGTGGCTTTGAGCTGT TTGTCTGAGTGTAATGCACTTAAGCAGCACTCGTTAATCAGGGGACTGCAGTTGGATGTGTCTT TAGCCTATGCTTGGGCATATCTTGGAAAGGTACCATCCGCTTATTTTATTTTCCTGGATTTAGA TTGTAATTTGAAAATAAATGAAACCAACTCTGTTATTTATTTATGAATTGACTAATATTGCATT TACAATGTGTTTAGTATGTAGAAAAATAAATCCTGTATAGGCAGGCCATATTCTATGGGAAGAA TGTTAACGATTTCAGATGTCATATTCAATAGATGGTTAGTAGTTGCTGTGTTAGAAGTCACTTT CTATGGATGGTCAGGAGCTTGAAAAATGTGCAATTCTTAGCTTAAATGCAACCCTAAGGTTAAC CTTTGAAGTGTGTGCTTAAACTTGTCTTGATCAACTCTTGTTGTTAAGAGTCTAATTGTTGATG CCTTGATGGGTATCTACCGCCTCTATATTTTGGCAGCTTTATAGAGAAGAGAATGAGAAGAAAT TGGCTAGGCAAGCATTTGACTGTGCTAGAGGTATAGATCCATCGCTGGCATTACCATGGGCTGG GATGTCAGCTGATGCTCATACTGGGTAAGTTTTTTACTTTTTTCTGTTTACAAAAATATTTAGA AATGATTTGTCGGTTAATAGTCATATCAATACTGAACCATACTTAATTTTTTAGGGATTCAACA CCAGATGATGCTTTTGAGAGCTGCCTACGTGCTGTGGAGATATTTCCGGTAAGTGTTGATATCA CGTTTTATGCTCTTCCCAAGGTATGAAATTAACCTTGAATTAATTGTTTGCTGCATAATCCTGT ACGGTCAGCAAAGAAATTGAGGCCGTAACCATATCCTACCAGAGCAGTTTTAACTGCTGGGCTT GACCTGCATTCTACAAATACTTTATGCAACTGTAATCTGATCTTTGCTTTATTTGCAGCTTGCA GAGTTCCAAATTGGACTTGCTAAGCTTGCTTTACTTTCTGGGAACCTTTCTTCTTCGCAGGTAT TGTAGCTAAAATGTTACAGCACATCATCTTCATAAAAAATAAGAAAAAAACACACGAGAAAGTC AACCGCAAAAATATTTGAAGCATACCACTATCTGGGAAAGATATACCTGTAGCAACAACTGATA AGAACCATGCTTTAACAAGTATTTGTGTGATAGTTCTAGTGTTTTATAACAGGTATTTGGAGCT ATCCAGCAGGCTGTGCAACGGGCACCGCACTACCACGAATCCCATAATTTATATGGGCTAGTTC ACGAGGCACGTATGCAGTTTCAAGCTGCCATTGCTTCTTACAGGCTAGCTCGCTATGCCATCAA CATTTCTTTAGGCACTGTCCTCAAATCTCACTTGAAAGACATATCAACAAATTTGGCTAGATCA CTTAGTAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.427536229

Conservation Information
Conserved circRNAs	NA
PMCS	0.427536229

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							14282625-14285913(+)
14282009-14285907(-)
						
					

						Potential amino acid sequence
						
							MFTAAIKSYSRAIELEDTRVFALIECGNIFLMLGSFRKGIEQFQQALKISLQNMSALYGLASGL
LGMAKECRNSGAFRWAASLLEDARKVAEASIKSAGNSSCTWKLHGDILLTYAQVFPWTEESQGL
EYNAETFKNSVYSWKNTCGLAAISARNSYQRALHLAPWQANIYIDIAISSNLISSFNQDNTLDK
CTWKLPEKLTLGALALEGENSEFWVALSCLSECNALKQHSLIRGLQLDVSLAYAWAYLGKLYRE
ENEKKLARQAFDCARGIDPSLALPWAGMSADAHTGDSTPDDAFESCLRAVEIFPVSVDITFYAL
PKLAEFQIGLAKLALLSGNLSSSQVFGAIQQAVQRAPHYHESHNLYGLVHEARMQFQAAIASYR
LARYAINISLGTVLKSHLKDISTNLARSLSKGELEGEERRRLEELLESNPDDSSLHFQLGVCLW
ETQTEKEKAAEHWVISVKQNPKNAAAFTYLGHYYATVSVDIPRAIKCYQRALSLNPDDSDSGEA
LCDLLDSQGKETLEVAICKDASHNSPRAFWAFRRLGFLQVHQKKWSEAVQSLQQAIRGYPTSPD
LWEALGLAYHRLGMFTAAIKSYSRAIELEDTRVFALIECGNIFLMLGSFRKGIEQFQQALKISL
QNMSALYGLASGLLGMAKECRNSGAFRWAASLLEDARKVAEASIKSAGNSSCTWKLHGDILLTY
AQVFPWTEESQGLEYNAETFKNSVYSWKNTCGLAAISARNSYQRALHLAPWQANIYIDIAISSN
LISSFNQDNTLDKCTWKLPEKLTLGALALEGENSEFWVALSCLSECNALKQHSLIRGLQLDVSL
AYAWAYLGKLYREENEKKLARQAFDCARGIDPSLALPWAGMSADAHTGDSTPDDAFESCLRAVE
IFPVSVDITFYALPKLAEFQIGLAKLALLSGNLSSSQVFGAIQQAVQRAPHYHESHNLYGLVHE
ARMQFQAAIASYRLARYAINISLGTVLKSHLKDISTNLARSLSKGELEGEERRRLEELLESNPD
DSSLHFQLGVCLWETQTEKEKAAEHWVISVKQNPKNAAAFTYLGHYYATVSVDIPRAIKCYQRA
LSLNPDDSDSGEALCDLLDSQGKETLEVAICKDASHNSPRAFWAFRRLGFLQVHQKKWSEAVQS
LQQAIRGYPTSPDLWEALGLAYHRLGMFTAAIKSYSRAIELEDTRVFALIECGNIFLMLGSFRK
GIEQFQQALKISLQNMSALYGLASGLLGMAKECRNSGAFRWAASLLEDARKVAEASIKSAGNSS
CTWKLHGDILLTYAQVFPWTEESQGLEYNAETFKNSVYSWKNTCGLAAISARNSYQRALHLAPW
QANIYIDIAISSNLISSFNQDNTLDKCTWKLPEKLTLGALALEGENSEFWVALSCLSECNALKQ
HSLIRGLQLDVSLAYAWAYLGKLYREENEKKLARQAFDCARGIDPSLALPWAGMSADAHTGDST
PDDAFESCLRAVEIFPVSVDITFYALPKLAEFQIGLAKLALLSGNLSSSQVFGAIQQAVQRAPH
YHESHNLYGLVHEARMQFQAAIASYRLARYAINISLGTVLKSHLKDISTNLARSLSKGELEGEE
RRRLEELLESNPDDSSLHFQLGVCLWETQTEKEKAAEHWVISVKQNPKNAAAFTYLGHYYATVS
VDIPRAIKCYQRALSLNPDDSDSGEALCDLLDSQGKETLEVAICKDASHNSPRAFWAFRRLGFL
QVHQKKWSEAVQSLQQAIRGYPTSPDLWEALGLAYHRLGMFTAAIKSYSRAIELEDTRVFALIE
CGNIFLMLGSFRKGIEQFQQALKISLQNMSALYGLASGLLGMAKECRNSGAFRWAASLLEDARK
VAEASIKSAGNSSCTWKLHGDILLTYAQVFPWTEESQGLEYNAETFKNSVYSWKNTCGLAAISA
RNSYQRALHLAPWQANIYIDIAISSNLISSFNQDNTLDKCTWKLPEKLTLGALALEGENSEFWV
ALSCLSECNALKQHSLIRGLQLDVSLAYAWAYLGKLYREENEKKLARQAFDCARGIDPSLALPW
AGMSADAHTGDSTPDDAFESCLRAVEIFPVSVDITFYALPKLAEFQIGLAKLALLSGNLSSSQV
FGAIQQAVQRAPHYHESHNLYGLVHEARMQFQAAIASYRLARYAINISLGTVLKSHLKDISTNL
ARSLSK(+)
MAQVGKGSCVLRVLFNGNHPMLRRFLFLRLSLPQAYSKLKMKGRVIGIAFEQLLQSPSFFSLQL
TLTK*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	14282625-14285913(+) 14282009-14285907(-)
Potential amino acid sequence	MFTAAIKSYSRAIELEDTRVFALIECGNIFLMLGSFRKGIEQFQQALKISLQNMSALYGLASGL LGMAKECRNSGAFRWAASLLEDARKVAEASIKSAGNSSCTWKLHGDILLTYAQVFPWTEESQGL EYNAETFKNSVYSWKNTCGLAAISARNSYQRALHLAPWQANIYIDIAISSNLISSFNQDNTLDK CTWKLPEKLTLGALALEGENSEFWVALSCLSECNALKQHSLIRGLQLDVSLAYAWAYLGKLYRE ENEKKLARQAFDCARGIDPSLALPWAGMSADAHTGDSTPDDAFESCLRAVEIFPVSVDITFYAL PKLAEFQIGLAKLALLSGNLSSSQVFGAIQQAVQRAPHYHESHNLYGLVHEARMQFQAAIASYR LARYAINISLGTVLKSHLKDISTNLARSLSKGELEGEERRRLEELLESNPDDSSLHFQLGVCLW ETQTEKEKAAEHWVISVKQNPKNAAAFTYLGHYYATVSVDIPRAIKCYQRALSLNPDDSDSGEA LCDLLDSQGKETLEVAICKDASHNSPRAFWAFRRLGFLQVHQKKWSEAVQSLQQAIRGYPTSPD LWEALGLAYHRLGMFTAAIKSYSRAIELEDTRVFALIECGNIFLMLGSFRKGIEQFQQALKISL QNMSALYGLASGLLGMAKECRNSGAFRWAASLLEDARKVAEASIKSAGNSSCTWKLHGDILLTY AQVFPWTEESQGLEYNAETFKNSVYSWKNTCGLAAISARNSYQRALHLAPWQANIYIDIAISSN LISSFNQDNTLDKCTWKLPEKLTLGALALEGENSEFWVALSCLSECNALKQHSLIRGLQLDVSL AYAWAYLGKLYREENEKKLARQAFDCARGIDPSLALPWAGMSADAHTGDSTPDDAFESCLRAVE IFPVSVDITFYALPKLAEFQIGLAKLALLSGNLSSSQVFGAIQQAVQRAPHYHESHNLYGLVHE ARMQFQAAIASYRLARYAINISLGTVLKSHLKDISTNLARSLSKGELEGEERRRLEELLESNPD DSSLHFQLGVCLWETQTEKEKAAEHWVISVKQNPKNAAAFTYLGHYYATVSVDIPRAIKCYQRA LSLNPDDSDSGEALCDLLDSQGKETLEVAICKDASHNSPRAFWAFRRLGFLQVHQKKWSEAVQS LQQAIRGYPTSPDLWEALGLAYHRLGMFTAAIKSYSRAIELEDTRVFALIECGNIFLMLGSFRK GIEQFQQALKISLQNMSALYGLASGLLGMAKECRNSGAFRWAASLLEDARKVAEASIKSAGNSS CTWKLHGDILLTYAQVFPWTEESQGLEYNAETFKNSVYSWKNTCGLAAISARNSYQRALHLAPW QANIYIDIAISSNLISSFNQDNTLDKCTWKLPEKLTLGALALEGENSEFWVALSCLSECNALKQ HSLIRGLQLDVSLAYAWAYLGKLYREENEKKLARQAFDCARGIDPSLALPWAGMSADAHTGDST PDDAFESCLRAVEIFPVSVDITFYALPKLAEFQIGLAKLALLSGNLSSSQVFGAIQQAVQRAPH YHESHNLYGLVHEARMQFQAAIASYRLARYAINISLGTVLKSHLKDISTNLARSLSKGELEGEE RRRLEELLESNPDDSSLHFQLGVCLWETQTEKEKAAEHWVISVKQNPKNAAAFTYLGHYYATVS VDIPRAIKCYQRALSLNPDDSDSGEALCDLLDSQGKETLEVAICKDASHNSPRAFWAFRRLGFL QVHQKKWSEAVQSLQQAIRGYPTSPDLWEALGLAYHRLGMFTAAIKSYSRAIELEDTRVFALIE CGNIFLMLGSFRKGIEQFQQALKISLQNMSALYGLASGLLGMAKECRNSGAFRWAASLLEDARK VAEASIKSAGNSSCTWKLHGDILLTYAQVFPWTEESQGLEYNAETFKNSVYSWKNTCGLAAISA RNSYQRALHLAPWQANIYIDIAISSNLISSFNQDNTLDKCTWKLPEKLTLGALALEGENSEFWV ALSCLSECNALKQHSLIRGLQLDVSLAYAWAYLGKLYREENEKKLARQAFDCARGIDPSLALPW AGMSADAHTGDSTPDDAFESCLRAVEIFPVSVDITFYALPKLAEFQIGLAKLALLSGNLSSSQV FGAIQQAVQRAPHYHESHNLYGLVHEARMQFQAAIASYRLARYAINISLGTVLKSHLKDISTNL ARSLSK(+) MAQVGKGSCVLRVLFNGNHPMLRRFLFLRLSLPQAYSKLKMKGRVIGIAFEQLLQSPSFFSLQL TLTK*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhao et al., 2017b

circRNA

Detail information of orai.009G185700_circ_g.2

Address

Any questions?

Supported by