Plant Circular RNA Database

Detail information of orai.003G068000_circ_g.2

			
						 General Information
					
						CircRNA Name
						orai.003G068000_circ_g.2
					
						ID in PlantcircBase
						gra_circ_000246
					
						Alias
						Chr03:14296330|14298808
					
						Organism
						
							Gossypium raimondii						
					
						Position
						
							chrChr03: 14296330-14298808  JBrowse»						
					
						Reference genome
						
							Graimondii_221						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Gorai.003G068000						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							orai.003G068000_circ_g.1 						
					
						Support reads
						3
					
						Tissues
						ovule
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Gorai.003G068000.4:2
Gorai.003G068000.2:1
Gorai.003G068000.9:1
Gorai.003G068000.3:2
Gorai.003G068000.8:1
Gorai.003G068000.1:1
Gorai.003G068000.5:1
Gorai.003G068000.7:2
Gorai.003G068000.6:1
Gorai.003G068000.10:1

General Information
CircRNA Name	orai.003G068000_circ_g.2
ID in PlantcircBase	gra_circ_000246
Alias	Chr03:14296330\|14298808
Organism	Gossypium raimondii
Position	chrChr03: 14296330-14298808 JBrowse»
Reference genome	Graimondii_221
Type	ue-circRNA
Identification method	CIRI
Parent gene	Gorai.003G068000
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	orai.003G068000_circ_g.1
Support reads	3
Tissues	ovule
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Gorai.003G068000.4:2 Gorai.003G068000.2:1 Gorai.003G068000.9:1 Gorai.003G068000.3:2 Gorai.003G068000.8:1 Gorai.003G068000.1:1 Gorai.003G068000.5:1 Gorai.003G068000.7:2 Gorai.003G068000.6:1 Gorai.003G068000.10:1

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGTGATTGCTACAGTTCAAGGGACTAATATTCCGCAAACACCTGAAAAAATTGATCAATATCTG
TCATTTTCAAAACCAAAGCTTAGCAAACTTGTACAGaagcaggagtaggagctggagcagaagt
cgaagtataagcaggagccggagtccagttcgtagcgttcggtggcaatctggattacatgaga
gaaccata

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2479
Transcript exons: 14296330-14298808
AAGCAGGAGTAGGAGCTGGAGCAGAAGTCGAAGTATAAGCAGGAGCCGGAGTCCAGTTCGTAGC
GTTCGGTGGCAATCTGGATTACATGAGAGAACCATAAACAGATCTGGAGTGTCAACTCAATTAT
GTAAAGATTTTATGGCTGGTAGATGCAGGAGAGGCAGTCAGTGTCACTTTCTTCACCAAGATAT
TCAAAGTCGTGAGGATGGTTGGGATAATAGACAAAAGAGAGCTGGTGTTTCAAAATATATTACT
CACGATGATTGTAAAGATTACCTTGTTAAGAGTGGAAGGTCTACTGATTGCTGCACTGATTATC
TGAAAGGTAACTGCCGCAGGGGTGCATCATGTAGGTTTGCTCATGATGGTGCTACTGATGGCTT
CAGTAGAAGAACAACGAATGAGATAAGTAGTGAAAGGGAAAACACCAAGCGGAACAGAATTAGA
ACTCCAGATCGTGATGGTGAGCGTGAAGCTCGTCGAAGCAGTGATATTCCTTGCAAATTCTTTG
CTTCTGGAAATTGTCATAATGGAAAATATTGTAGGTTTTCTCATCATGGTCAGGCACGTGCAAG
TCCTGATAGAAGGTCACGTGGTGATAGAGGTGTATGGTGTCCAAGTTCCATTAATGTGGATAGG
TTGCAGGATGGTCCAACATTGAGAGATACAGATGCTTCATTCAATGTGAATAAATCTTGGAATG
CTCCTGAAAGAAGTTATGCTAATGTGATAAATGAAGCTGAGATACCCTGGACTGGTCCAAAATG
GAGTGATCTTGATGCTTCAAATGATGCAAACAACTCATGGACTGGTTCAAAATGGAGTGATGCT
GAGGCCTCAAATGATGCGAACAATTCATGGACTGGTTCAAAATGGAGTGATACAGGTGCCTACT
TAGGGGCTACAAAGTTCAGCAAGGACACAATTGGAAAAAAGGGTGCCTCTGAACCAAGATTCTC
TAATTGGTCCATGGATGAGAAATGGCAGCACAACTATGATGTCAGTGGAAAGAACATTGAGGCT
GATGTGCAGTATAAAAAAGTTGATATTGACAAGGATGAACAAACTCCGAGGAAGATAGAAAATT
CTGGTGTTAATATTGGCGTATCTGAACCAAAAGGTGCTGAAGAGTCGCTTGGTGATATGGAAAT
GTCCCCTGAGTGGAATTACAAGATACAGTCTTCTATTAAAAAGGAACTCTCTCATGGTTCAAAA
CCAGCTCTTGTCGAAACACTTTTACATTCTCAAGAAAGGAATATAACTGAAGCGGCCTCAGATC
AGGTACATGATGGGCTTGCAGCTTTGCCAATGTTAACTGAGAAATCTAATGTTCACCAGGACCA
CCTGATGAGGTGCAGCAGTGGTGTAGCACTGCCATGTGTCAGCAATGCTCTTAACACAACTTCC
AATTCACACATTGTTCTAAATTTTTCTATCAACAACACGCCGTTGCCAAGCTTTGACCAGCCTG
GGCCAAGTCCTAGTACTTTACCTTGTTCAAACTTAAATGCAGTTGGACAAAGTCAAGTGACAAT
CCCTTCTAATGAAGTGACTATGGAAGATGCCCAAAACGGCCTGCTGTTTCAAGAGGAGAAAAGA
AGCAATGAACTAAATATTGGGGATGCAAATGTATTACATGGTAATTCTGGGTCTAAGTCAACTC
AGACTATGGTAAGCAATGAGCAGCTCACCCAACTTACCAATCTTTCAGCCTCTCTAGCTCAGTT
GTTTGGACAGGGGCAGCAACTTCCATTACTTCATGCTGCTCTTAATGCCCATAATGGAATGCAG
GTGACTTCTATTGCAAACTCTGGAGGTCATATTGAGCCAGATTCCATGCCAAATCTACAGCCAG
ATCAAGACATTACTTTCCCAAAACAATATGACCCTATATCTGATAGTATTGAGCCTGCCAAGAA
GCAGGGCACAGATACAAAGCCTTTGGGGTTTTCAATACAGCCTGTTGCAGAGAAAAATACTGAT
GGCCAACCTGAACTATCGGCTAATAAGTTGTTACCTTCATCTCTTTTGTGTAGTAATAATGATG
ATGATTATCATAATGATCTCAGTTCCAGAAGAGAGCCTGATTTTAATAGCCATAAGCCAAATCA
GCTGGAGCCTGTTGCAAGTTCCGAGGCAAAGAAGAAAAATGAAGGAGTTGAGGAAACCAAGAAA
GCTGAAGGGGAGAATGGCCCATCAGAGAGTGGAGATGCTGATGACAAGACTGATGAGGCCAAGA
AGAACAAGGATACTAAGGGAATTCGTGCATTTAAATTTGCACTCGTTGAGTTTGTCAAGGATCT
CCTCAAACCGACATGGAAGGAAGGTCAAATTGGCAAAGAGGCTTACAAAAACATTGTGAAGAAG
GTTGTTGACAAAGTGATTGCTACAGTTCAAGGGACTAATATTCCGCAAACACCTGAAAAAATTG
ATCAATATCTGTCATTTTCAAAACCAAAGCTTAGCAAACTTGTACAG
						
					

						Genomic sequence
						
							AAGCAGGAGTAGGAGCTGGAGCAGAAGTCGAAGTATAAGCAGGAGCCGGAGTCCAGTTCGTAGC
GTTCGGTGGCAATCTGGATTACATGAGAGAACCATAAACAGATCTGGAGTGTCAACTCAATTAT
GTAAAGATTTTATGGCTGGTAGATGCAGGAGAGGCAGTCAGTGTCACTTTCTTCACCAAGATAT
TCAAAGTCGTGAGGATGGTTGGGATAATAGACAAAAGAGAGCTGGTGTTTCAAAATATATTACT
CACGATGATTGTAAAGATTACCTTGTTAAGAGTGGAAGGTCTACTGATTGCTGCACTGATTATC
TGAAAGGTAACTGCCGCAGGGGTGCATCATGTAGGTTTGCTCATGATGGTGCTACTGATGGCTT
CAGTAGAAGAACAACGAATGAGATAAGTAGTGAAAGGGAAAACACCAAGCGGAACAGAATTAGA
ACTCCAGATCGTGATGGTGAGCGTGAAGCTCGTCGAAGCAGTGATATTCCTTGCAAATTCTTTG
CTTCTGGAAATTGTCATAATGGAAAATATTGTAGGTTTTCTCATCATGGTCAGGCACGTGCAAG
TCCTGATAGAAGGTCACGTGGTGATAGAGGTGTATGGTGTCCAAGTTCCATTAATGTGGATAGG
TTGCAGGATGGTCCAACATTGAGAGATACAGATGCTTCATTCAATGTGAATAAATCTTGGAATG
CTCCTGAAAGAAGTTATGCTAATGTGATAAATGAAGCTGAGATACCCTGGACTGGTCCAAAATG
GAGTGATCTTGATGCTTCAAATGATGCAAACAACTCATGGACTGGTTCAAAATGGAGTGATGCT
GAGGCCTCAAATGATGCGAACAATTCATGGACTGGTTCAAAATGGAGTGATACAGGTGCCTACT
TAGGGGCTACAAAGTTCAGCAAGGACACAATTGGAAAAAAGGGTGCCTCTGAACCAAGATTCTC
TAATTGGTCCATGGATGAGAAATGGCAGCACAACTATGATGTCAGTGGAAAGAACATTGAGGCT
GATGTGCAGTATAAAAAAGTTGATATTGACAAGGATGAACAAACTCCGAGGAAGATAGAAAATT
CTGGTGTTAATATTGGCGTATCTGAACCAAAAGGTGCTGAAGAGTCGCTTGGTGATATGGAAAT
GTCCCCTGAGTGGAATTACAAGATACAGTCTTCTATTAAAAAGGAACTCTCTCATGGTTCAAAA
CCAGCTCTTGTCGAAACACTTTTACATTCTCAAGAAAGGAATATAACTGAAGCGGCCTCAGATC
AGGTACATGATGGGCTTGCAGCTTTGCCAATGTTAACTGAGAAATCTAATGTTCACCAGGACCA
CCTGATGAGGTGCAGCAGTGGTGTAGCACTGCCATGTGTCAGCAATGCTCTTAACACAACTTCC
AATTCACACATTGTTCTAAATTTTTCTATCAACAACACGCCGTTGCCAAGCTTTGACCAGCCTG
GGCCAAGTCCTAGTACTTTACCTTGTTCAAACTTAAATGCAGTTGGACAAAGTCAAGTGACAAT
CCCTTCTAATGAAGTGACTATGGAAGATGCCCAAAACGGCCTGCTGTTTCAAGAGGAGAAAAGA
AGCAATGAACTAAATATTGGGGATGCAAATGTATTACATGGTAATTCTGGGTCTAAGTCAACTC
AGACTATGGTAAGCAATGAGCAGCTCACCCAACTTACCAATCTTTCAGCCTCTCTAGCTCAGTT
GTTTGGACAGGGGCAGCAACTTCCATTACTTCATGCTGCTCTTAATGCCCATAATGGAATGCAG
GTGACTTCTATTGCAAACTCTGGAGGTCATATTGAGCCAGATTCCATGCCAAATCTACAGCCAG
ATCAAGACATTACTTTCCCAAAACAATATGACCCTATATCTGATAGTATTGAGCCTGCCAAGAA
GCAGGGCACAGATACAAAGCCTTTGGGGTTTTCAATACAGCCTGTTGCAGAGAAAAATACTGAT
GGCCAACCTGAACTATCGGCTAATAAGTTGTTACCTTCATCTCTTTTGTGTAGTAATAATGATG
ATGATTATCATAATGATCTCAGTTCCAGAAGAGAGCCTGATTTTAATAGCCATAAGCCAAATCA
GCTGGAGCCTGTTGCAAGTTCCGAGGCAAAGAAGAAAAATGAAGGAGTTGAGGAAACCAAGAAA
GCTGAAGGGGAGAATGGCCCATCAGAGAGTGGAGATGCTGATGACAAGACTGATGAGGCCAAGA
AGAACAAGGATACTAAGGGAATTCGTGCATTTAAATTTGCACTCGTTGAGTTTGTCAAGGATCT
CCTCAAACCGACATGGAAGGAAGGTCAAATTGGCAAAGAGGCTTACAAAAACATTGTGAAGAAG
GTTGTTGACAAAGTGATTGCTACAGTTCAAGGGACTAATATTCCGCAAACACCTGAAAAAATTG
ATCAATATCTGTCATTTTCAAAACCAAAGCTTAGCAAACTTGTACAG
						
					

			
		

Sequences
Splice junction sequence	AGTGATTGCTACAGTTCAAGGGACTAATATTCCGCAAACACCTGAAAAAATTGATCAATATCTG TCATTTTCAAAACCAAAGCTTAGCAAACTTGTACAGaagcaggagtaggagctggagcagaagt cgaagtataagcaggagccggagtccagttcgtagcgttcggtggcaatctggattacatgaga gaaccata
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2479 Transcript exons: 14296330-14298808 AAGCAGGAGTAGGAGCTGGAGCAGAAGTCGAAGTATAAGCAGGAGCCGGAGTCCAGTTCGTAGC GTTCGGTGGCAATCTGGATTACATGAGAGAACCATAAACAGATCTGGAGTGTCAACTCAATTAT GTAAAGATTTTATGGCTGGTAGATGCAGGAGAGGCAGTCAGTGTCACTTTCTTCACCAAGATAT TCAAAGTCGTGAGGATGGTTGGGATAATAGACAAAAGAGAGCTGGTGTTTCAAAATATATTACT CACGATGATTGTAAAGATTACCTTGTTAAGAGTGGAAGGTCTACTGATTGCTGCACTGATTATC TGAAAGGTAACTGCCGCAGGGGTGCATCATGTAGGTTTGCTCATGATGGTGCTACTGATGGCTT CAGTAGAAGAACAACGAATGAGATAAGTAGTGAAAGGGAAAACACCAAGCGGAACAGAATTAGA ACTCCAGATCGTGATGGTGAGCGTGAAGCTCGTCGAAGCAGTGATATTCCTTGCAAATTCTTTG CTTCTGGAAATTGTCATAATGGAAAATATTGTAGGTTTTCTCATCATGGTCAGGCACGTGCAAG TCCTGATAGAAGGTCACGTGGTGATAGAGGTGTATGGTGTCCAAGTTCCATTAATGTGGATAGG TTGCAGGATGGTCCAACATTGAGAGATACAGATGCTTCATTCAATGTGAATAAATCTTGGAATG CTCCTGAAAGAAGTTATGCTAATGTGATAAATGAAGCTGAGATACCCTGGACTGGTCCAAAATG GAGTGATCTTGATGCTTCAAATGATGCAAACAACTCATGGACTGGTTCAAAATGGAGTGATGCT GAGGCCTCAAATGATGCGAACAATTCATGGACTGGTTCAAAATGGAGTGATACAGGTGCCTACT TAGGGGCTACAAAGTTCAGCAAGGACACAATTGGAAAAAAGGGTGCCTCTGAACCAAGATTCTC TAATTGGTCCATGGATGAGAAATGGCAGCACAACTATGATGTCAGTGGAAAGAACATTGAGGCT GATGTGCAGTATAAAAAAGTTGATATTGACAAGGATGAACAAACTCCGAGGAAGATAGAAAATT CTGGTGTTAATATTGGCGTATCTGAACCAAAAGGTGCTGAAGAGTCGCTTGGTGATATGGAAAT GTCCCCTGAGTGGAATTACAAGATACAGTCTTCTATTAAAAAGGAACTCTCTCATGGTTCAAAA CCAGCTCTTGTCGAAACACTTTTACATTCTCAAGAAAGGAATATAACTGAAGCGGCCTCAGATC AGGTACATGATGGGCTTGCAGCTTTGCCAATGTTAACTGAGAAATCTAATGTTCACCAGGACCA CCTGATGAGGTGCAGCAGTGGTGTAGCACTGCCATGTGTCAGCAATGCTCTTAACACAACTTCC AATTCACACATTGTTCTAAATTTTTCTATCAACAACACGCCGTTGCCAAGCTTTGACCAGCCTG GGCCAAGTCCTAGTACTTTACCTTGTTCAAACTTAAATGCAGTTGGACAAAGTCAAGTGACAAT CCCTTCTAATGAAGTGACTATGGAAGATGCCCAAAACGGCCTGCTGTTTCAAGAGGAGAAAAGA AGCAATGAACTAAATATTGGGGATGCAAATGTATTACATGGTAATTCTGGGTCTAAGTCAACTC AGACTATGGTAAGCAATGAGCAGCTCACCCAACTTACCAATCTTTCAGCCTCTCTAGCTCAGTT GTTTGGACAGGGGCAGCAACTTCCATTACTTCATGCTGCTCTTAATGCCCATAATGGAATGCAG GTGACTTCTATTGCAAACTCTGGAGGTCATATTGAGCCAGATTCCATGCCAAATCTACAGCCAG ATCAAGACATTACTTTCCCAAAACAATATGACCCTATATCTGATAGTATTGAGCCTGCCAAGAA GCAGGGCACAGATACAAAGCCTTTGGGGTTTTCAATACAGCCTGTTGCAGAGAAAAATACTGAT GGCCAACCTGAACTATCGGCTAATAAGTTGTTACCTTCATCTCTTTTGTGTAGTAATAATGATG ATGATTATCATAATGATCTCAGTTCCAGAAGAGAGCCTGATTTTAATAGCCATAAGCCAAATCA GCTGGAGCCTGTTGCAAGTTCCGAGGCAAAGAAGAAAAATGAAGGAGTTGAGGAAACCAAGAAA GCTGAAGGGGAGAATGGCCCATCAGAGAGTGGAGATGCTGATGACAAGACTGATGAGGCCAAGA AGAACAAGGATACTAAGGGAATTCGTGCATTTAAATTTGCACTCGTTGAGTTTGTCAAGGATCT CCTCAAACCGACATGGAAGGAAGGTCAAATTGGCAAAGAGGCTTACAAAAACATTGTGAAGAAG GTTGTTGACAAAGTGATTGCTACAGTTCAAGGGACTAATATTCCGCAAACACCTGAAAAAATTG ATCAATATCTGTCATTTTCAAAACCAAAGCTTAGCAAACTTGTACAG
Genomic sequence	AAGCAGGAGTAGGAGCTGGAGCAGAAGTCGAAGTATAAGCAGGAGCCGGAGTCCAGTTCGTAGC GTTCGGTGGCAATCTGGATTACATGAGAGAACCATAAACAGATCTGGAGTGTCAACTCAATTAT GTAAAGATTTTATGGCTGGTAGATGCAGGAGAGGCAGTCAGTGTCACTTTCTTCACCAAGATAT TCAAAGTCGTGAGGATGGTTGGGATAATAGACAAAAGAGAGCTGGTGTTTCAAAATATATTACT CACGATGATTGTAAAGATTACCTTGTTAAGAGTGGAAGGTCTACTGATTGCTGCACTGATTATC TGAAAGGTAACTGCCGCAGGGGTGCATCATGTAGGTTTGCTCATGATGGTGCTACTGATGGCTT CAGTAGAAGAACAACGAATGAGATAAGTAGTGAAAGGGAAAACACCAAGCGGAACAGAATTAGA ACTCCAGATCGTGATGGTGAGCGTGAAGCTCGTCGAAGCAGTGATATTCCTTGCAAATTCTTTG CTTCTGGAAATTGTCATAATGGAAAATATTGTAGGTTTTCTCATCATGGTCAGGCACGTGCAAG TCCTGATAGAAGGTCACGTGGTGATAGAGGTGTATGGTGTCCAAGTTCCATTAATGTGGATAGG TTGCAGGATGGTCCAACATTGAGAGATACAGATGCTTCATTCAATGTGAATAAATCTTGGAATG CTCCTGAAAGAAGTTATGCTAATGTGATAAATGAAGCTGAGATACCCTGGACTGGTCCAAAATG GAGTGATCTTGATGCTTCAAATGATGCAAACAACTCATGGACTGGTTCAAAATGGAGTGATGCT GAGGCCTCAAATGATGCGAACAATTCATGGACTGGTTCAAAATGGAGTGATACAGGTGCCTACT TAGGGGCTACAAAGTTCAGCAAGGACACAATTGGAAAAAAGGGTGCCTCTGAACCAAGATTCTC TAATTGGTCCATGGATGAGAAATGGCAGCACAACTATGATGTCAGTGGAAAGAACATTGAGGCT GATGTGCAGTATAAAAAAGTTGATATTGACAAGGATGAACAAACTCCGAGGAAGATAGAAAATT CTGGTGTTAATATTGGCGTATCTGAACCAAAAGGTGCTGAAGAGTCGCTTGGTGATATGGAAAT GTCCCCTGAGTGGAATTACAAGATACAGTCTTCTATTAAAAAGGAACTCTCTCATGGTTCAAAA CCAGCTCTTGTCGAAACACTTTTACATTCTCAAGAAAGGAATATAACTGAAGCGGCCTCAGATC AGGTACATGATGGGCTTGCAGCTTTGCCAATGTTAACTGAGAAATCTAATGTTCACCAGGACCA CCTGATGAGGTGCAGCAGTGGTGTAGCACTGCCATGTGTCAGCAATGCTCTTAACACAACTTCC AATTCACACATTGTTCTAAATTTTTCTATCAACAACACGCCGTTGCCAAGCTTTGACCAGCCTG GGCCAAGTCCTAGTACTTTACCTTGTTCAAACTTAAATGCAGTTGGACAAAGTCAAGTGACAAT CCCTTCTAATGAAGTGACTATGGAAGATGCCCAAAACGGCCTGCTGTTTCAAGAGGAGAAAAGA AGCAATGAACTAAATATTGGGGATGCAAATGTATTACATGGTAATTCTGGGTCTAAGTCAACTC AGACTATGGTAAGCAATGAGCAGCTCACCCAACTTACCAATCTTTCAGCCTCTCTAGCTCAGTT GTTTGGACAGGGGCAGCAACTTCCATTACTTCATGCTGCTCTTAATGCCCATAATGGAATGCAG GTGACTTCTATTGCAAACTCTGGAGGTCATATTGAGCCAGATTCCATGCCAAATCTACAGCCAG ATCAAGACATTACTTTCCCAAAACAATATGACCCTATATCTGATAGTATTGAGCCTGCCAAGAA GCAGGGCACAGATACAAAGCCTTTGGGGTTTTCAATACAGCCTGTTGCAGAGAAAAATACTGAT GGCCAACCTGAACTATCGGCTAATAAGTTGTTACCTTCATCTCTTTTGTGTAGTAATAATGATG ATGATTATCATAATGATCTCAGTTCCAGAAGAGAGCCTGATTTTAATAGCCATAAGCCAAATCA GCTGGAGCCTGTTGCAAGTTCCGAGGCAAAGAAGAAAAATGAAGGAGTTGAGGAAACCAAGAAA GCTGAAGGGGAGAATGGCCCATCAGAGAGTGGAGATGCTGATGACAAGACTGATGAGGCCAAGA AGAACAAGGATACTAAGGGAATTCGTGCATTTAAATTTGCACTCGTTGAGTTTGTCAAGGATCT CCTCAAACCGACATGGAAGGAAGGTCAAATTGGCAAAGAGGCTTACAAAAACATTGTGAAGAAG GTTGTTGACAAAGTGATTGCTACAGTTCAAGGGACTAATATTCCGCAAACACCTGAAAAAATTG ATCAATATCTGTCATTTTCAAAACCAAAGCTTAGCAAACTTGTACAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							gar_circ_000844* 						
					
						PMCS
						0.855794978

Conservation Information
Conserved circRNAs	gar_circ_000844*
PMCS	0.855794978

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							14296469-14296338(+)
14296429-14298781(-)
						
						Potential amino acid sequence
						
							MAGRCRRGSQCHFLHQDIQSREDGWDNRQKRAGVSKYITHDDCKDYLVKSGRSTDCCTDYLKGN
CRRGASCRFAHDGATDGFSRRTTNEISSERENTKRNRIRTPDRDGEREARRSSDIPCKFFASGN
CHNGKYCRFSHHGQARASPDRRSRGDRGVWCPSSINVDRLQDGPTLRDTDASFNVNKSWNAPER
SYANVINEAEIPWTGPKWSDLDASNDANNSWTGSKWSDAEASNDANNSWTGSKWSDTGAYLGAT
KFSKDTIGKKGASEPRFSNWSMDEKWQHNYDVSGKNIEADVQYKKVDIDKDEQTPRKIENSGVN
IGVSEPKGAEESLGDMEMSPEWNYKIQSSIKKELSHGSKPALVETLLHSQERNITEAASDQVHD
GLAALPMLTEKSNVHQDHLMRCSSGVALPCVSNALNTTSNSHIVLNFSINNTPLPSFDQPGPSP
STLPCSNLNAVGQSQVTIPSNEVTMEDAQNGLLFQEEKRSNELNIGDANVLHGNSGSKSTQTMV
TSIANSGGHIEPDSMPNLQPDQDITFPKQYDPISDSIEPAKKQGTDTKPLGFSIQPVAEKNTDG
QPELSANKLLPSSLLCSNNDDDYHNDLSSRREPDFNSHKPNQLEPVASSEAKKKNEGVEETKKA
EGENGPSESGDADDKTDEAKKNKDTKGIRAFKFALVEFVKDLLKPTWKEGQIGKEAYKNIVKKV
VDKVIATVQGTNIPQTPEKIDQYLSFSKPKLSKLVQKQE*(+)
MVLSCNPDCHRTLRTGLRLLLILRLLLQLLLLLLYKFAKLWF*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	14296469-14296338(+) 14296429-14298781(-)
Potential amino acid sequence	MAGRCRRGSQCHFLHQDIQSREDGWDNRQKRAGVSKYITHDDCKDYLVKSGRSTDCCTDYLKGN CRRGASCRFAHDGATDGFSRRTTNEISSERENTKRNRIRTPDRDGEREARRSSDIPCKFFASGN CHNGKYCRFSHHGQARASPDRRSRGDRGVWCPSSINVDRLQDGPTLRDTDASFNVNKSWNAPER SYANVINEAEIPWTGPKWSDLDASNDANNSWTGSKWSDAEASNDANNSWTGSKWSDTGAYLGAT KFSKDTIGKKGASEPRFSNWSMDEKWQHNYDVSGKNIEADVQYKKVDIDKDEQTPRKIENSGVN IGVSEPKGAEESLGDMEMSPEWNYKIQSSIKKELSHGSKPALVETLLHSQERNITEAASDQVHD GLAALPMLTEKSNVHQDHLMRCSSGVALPCVSNALNTTSNSHIVLNFSINNTPLPSFDQPGPSP STLPCSNLNAVGQSQVTIPSNEVTMEDAQNGLLFQEEKRSNELNIGDANVLHGNSGSKSTQTMV TSIANSGGHIEPDSMPNLQPDQDITFPKQYDPISDSIEPAKKQGTDTKPLGFSIQPVAEKNTDG QPELSANKLLPSSLLCSNNDDDYHNDLSSRREPDFNSHKPNQLEPVASSEAKKKNEGVEETKKA EGENGPSESGDADDKTDEAKKNKDTKGIRAFKFALVEFVKDLLKPTWKEGQIGKEAYKNIVKKV VDKVIATVQGTNIPQTPEKIDQYLSFSKPKLSKLVQKQE(+) MVLSCNPDCHRTLRTGLRLLLILRLLLQLLLLLLYKFAKLWF(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhao et al., 2017b

circRNA

Detail information of orai.003G068000_circ_g.2

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