Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d037808_circ_g.10 |
ID in PlantcircBase | zma_circ_002324 |
Alias | circ1085 |
Organism | Zea mays |
Position | chr6: 138480529-138480888 JBrowse» |
Reference genome | AGPv4.38 |
Type | ei-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d037808 |
Parent gene annotation |
protein_coding |
Parent gene strand | - |
Alternative splicing | Zm00001d037808_circ_g.11 |
Support reads | 7 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-GA |
Number of exons covered | Zm00001d037808_T002:2 Zm00001d037808_T004:2 Zm00001d037808_T009:1 Zm00001d037808_T006:2 Zm00001d037808_T001:2 Zm00001d037808_T003:2 Zm00001d037808_T005:2 |
Conservation Information | |
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Conserved circRNAs | osi_circ_015296 |
PMCS | 0.287842384 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |