Plant Circular RNA Database

Detail information of Zm00001d048546_circ_g.3

			
				
						 General Information
					

				
						CircRNA Name
						Zm00001d048546_circ_g.3
					

						ID in PlantcircBase
						zma_circ_010122
					

						Alias
						zma_circ_0003148
					

						Organism
						
							Zea mays						
					

						Position
						
							chr9: 158440587-158443244  JBrowse»						
					

						Reference genome
						
							AGPv4.38						
					

						Type  
						
							u-circRNA							
									
								

					

						Identification method
						find_circ
					

						Parent gene
						
							Zm00001d048546						
					

						Parent gene annotation
						
							transcription regulators
							
					

						Parent gene strand
						-
					

						Alternative splicing
						
							Zm00001d048546_circ_igg.1 Zm00001d048546_circ_g.2 Zm00001d048546_circ_g.3 Zm00001d048546_circ_g.4 Zm00001d048546_circ_g.5 						
					

						Support reads
						NA
					

						Tissues
						leaf, root
					

						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

					

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

					

						Number of exons covered
						Zm00001d048546_T078:12
Zm00001d048546_T043:12
Zm00001d048546_T028:12
Zm00001d048546_T070:12
Zm00001d048546_T058:12
Zm00001d048546_T006:12
Zm00001d048546_T013:12
Zm00001d048546_T066:3
Zm00001d048546_T049:10
Zm00001d048546_T052:12
Zm00001d048546_T011:12
Zm00001d048546_T007:12
Zm00001d048546_T021:12
Zm00001d048546_T055:11
Zm00001d048546_T035:12
Zm00001d048546_T060:12
Zm00001d048546_T039:12
Zm00001d048546_T062:12
Zm00001d048546_T113:12
Zm00001d048546_T004:12
Zm00001d048546_T030:12
Zm00001d048546_T063:12
Zm00001d048546_T083:12
Zm00001d048546_T032:10
Zm00001d048546_T120:12
Zm00001d048546_T112:12
Zm00001d048546_T069:11
Zm00001d048546_T041:13
Zm00001d048546_T072:12
Zm00001d048546_T001:12
Zm00001d048546_T117:12
Zm00001d048546_T009:12
Zm00001d048546_T008:12
Zm00001d048546_T121:12
Zm00001d048546_T047:12
Zm00001d048546_T087:10
Zm00001d048546_T076:12
Zm00001d048546_T114:12
Zm00001d048546_T077:12
Zm00001d048546_T075:12
Zm00001d048546_T005:12
Zm00001d048546_T026:12
Zm00001d048546_T071:12
Zm00001d048546_T068:9
Zm00001d048546_T014:12
Zm00001d048546_T085:12
Zm00001d048546_T046:12
Zm00001d048546_T054:12
Zm00001d048546_T081:12
Zm00001d048546_T024:12
Zm00001d048546_T074:12
Zm00001d048546_T016:2
Zm00001d048546_T073:12
Zm00001d048546_T079:12
Zm00001d048546_T111:12
Zm00001d048546_T084:12
Zm00001d048546_T067:9
Zm00001d048546_T019:12
Zm00001d048546_T115:12
Zm00001d048546_T038:12

					

			
		

General Information
CircRNA Name	Zm00001d048546_circ_g.3
ID in PlantcircBase	zma_circ_010122
Alias	zma_circ_0003148
Organism	Zea mays
Position	chr9: 158440587-158443244 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ
Parent gene	Zm00001d048546
Parent gene annotation	transcription regulators
Parent gene strand	-
Alternative splicing	Zm00001d048546_circ_igg.1 Zm00001d048546_circ_g.2 Zm00001d048546_circ_g.3 Zm00001d048546_circ_g.4 Zm00001d048546_circ_g.5
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d048546_T078:12 Zm00001d048546_T043:12 Zm00001d048546_T028:12 Zm00001d048546_T070:12 Zm00001d048546_T058:12 Zm00001d048546_T006:12 Zm00001d048546_T013:12 Zm00001d048546_T066:3 Zm00001d048546_T049:10 Zm00001d048546_T052:12 Zm00001d048546_T011:12 Zm00001d048546_T007:12 Zm00001d048546_T021:12 Zm00001d048546_T055:11 Zm00001d048546_T035:12 Zm00001d048546_T060:12 Zm00001d048546_T039:12 Zm00001d048546_T062:12 Zm00001d048546_T113:12 Zm00001d048546_T004:12 Zm00001d048546_T030:12 Zm00001d048546_T063:12 Zm00001d048546_T083:12 Zm00001d048546_T032:10 Zm00001d048546_T120:12 Zm00001d048546_T112:12 Zm00001d048546_T069:11 Zm00001d048546_T041:13 Zm00001d048546_T072:12 Zm00001d048546_T001:12 Zm00001d048546_T117:12 Zm00001d048546_T009:12 Zm00001d048546_T008:12 Zm00001d048546_T121:12 Zm00001d048546_T047:12 Zm00001d048546_T087:10 Zm00001d048546_T076:12 Zm00001d048546_T114:12 Zm00001d048546_T077:12 Zm00001d048546_T075:12 Zm00001d048546_T005:12 Zm00001d048546_T026:12 Zm00001d048546_T071:12 Zm00001d048546_T068:9 Zm00001d048546_T014:12 Zm00001d048546_T085:12 Zm00001d048546_T046:12 Zm00001d048546_T054:12 Zm00001d048546_T081:12 Zm00001d048546_T024:12 Zm00001d048546_T074:12 Zm00001d048546_T016:2 Zm00001d048546_T073:12 Zm00001d048546_T079:12 Zm00001d048546_T111:12 Zm00001d048546_T084:12 Zm00001d048546_T067:9 Zm00001d048546_T019:12 Zm00001d048546_T115:12 Zm00001d048546_T038:12

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ACCTCAATTGGTATATCTCTTTGTTCCGCTGCTGCAACAAGCGTCTCTATATTCAAAGCAGTCC
CAAATCCAGTAGTATATGAAGGCTGCCTCGGTAATCctgacgtgttgccacagcctcaatgatg
gcacagccaagatccagattatcgttgactagcatgtgaataatttgctcgatagtttcactgc
cactcata

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1505
Transcript exons: 158440587-158440739,158440866-158440961,158441030-158441
135,158441220-158441305,158441389-158441535,158441614-15
8441853,158441947-158442075,158442216-158442263,15844252
8-158442674,158442755-158442863,158442931-158443076,1584
43147-158443244
CTGACGTGTTGCCACAGCCTCAATGATGGCACAGCCAAGATCCAGATTATCGTTGACTAGCATG
TGAATAATTTGCTCGATAGTTTCACTGCCACTCATAAGGTTTTGAATGAGATTCCGAAGATTGG
AATATAGTGCGACACGAAGAGGTTCCTTGCAAGTAACATGGGCAAGACTTCCGGCTAATGTTCC
AACCATCAAATGTGCAGATCGAGTTATCATATTGTTATCAGACTCCAGTGCATAATCCTTCAGG
ATAAGTTCTTTTGTAGTTCGGCTTGCTATTGTCACACTTCTTTGAATAACAGGGAGTATTATCT
CCCTGTTAGCCTTATCCAAAGCCAAATCCATAATTTTGCTATACTGCAATTGTGGACCAATTGA
GCCAAGCTTTGGGTTTATTTTGAAGCATATCTCATCACGTGGAATAGCTGCCATAAGCTGATTA
ACAGAGAATGGAGATGGTGATGGTGATTGTGTTTGTGCTGGCAAAACCTGGGTCAAGGAGGACA
CTTGCTCAGGCATCATCAGAGCAACTTTGTCAGCTTCTACCGTGCTGTTTGTGGGTAGACGGAC
AGGAGCCACATACTGATTGAGTATATTTGGAAGACTCATAGCTCGGGATGTAATATTGATCTCA
GGCTGCAGTTCAACATGAGTTGATGAAGGAATAGTCCCTGGAAGAACTTCTGGAACCACAGGGG
TTTGAGAGGTAGTAACATCTTTATTTGAAAAATCCGGATTTCCTTCGACCTCGCGCAGACGATC
TTTAAGCAGGGAAGTTGGTTTCACATCCTTCATGTCAACTGTAAGATTCTTAAACAGAACCTCG
ATATCAAATTTCAGATTCATCTTCAGGTTTGGAAGATTATAAATTTCAGCAAGTAGACTTAGAA
TTCCAATGGTCCAGGGATTTGGAGGACGATATGCGATACTTGACTGGCAAGGTTCAAGAATCTT
TGAAGTGAATGGTATGACCGCAATCATCAATCCTTTCTCGTACGCCTCCACAATAAGAGATTTT
GGGTCAATCTCCTTAGCCCTTAGTGCCTGGTTCCTACCAATGGTGAACTTGCCCAACCAGCTGC
CTAAGTTTTTTAGCAAGGAACGCTCCTCAGAACTAGATTTGATAAGGTCTGATCTTAACAAGAC
CTTGCAGTTCTCATACGTAGCCTTCAGCATTTCCTTGTTCAAGGATTTTGAGTTTAATTTATCA
AAGAACTTCAAATACAGATCATGGAAATTTGGTTCAATGCTTGCCCTTTTCATGACCATGTATT
GTGCAAACCAAGGATAATGTTGTTCCTGTATGACCTCATTAAATTCCTTTGCCTTAGCTTCCAT
GTTTGAGATGGATATATTGTTGATCATAAAAAGAATCTTGTCCTGAACTTCAGGTGGAGGTGTC
TCAATTGGTATATCTCTTTGTTCCGCTGCTGCAACAAGCGTCTCTATATTCAAAGCAGTCCCAA
ATCCAGTAGTATATGAAGGCTGCCTCGGTAATC
						
					

						Genomic sequence
						
							CTGACGTGTTGCCACAGCCTCAATGATGGCACAGCCAAGATCCAGATTATCGTTGACTAGCATG
TGAATAATTTGCTCGATAGTTTCACTGCCACTCATAAGGTTTTGAATGAGATTCCGAAGATTGG
AATATAGTGCGACACGAAGAGGTTCCTATACCAGAGAAAAAGAAATACAATTATTAGTTGTGTT
CAACAGATACAGAATGGTTAGGCTAATAGAATGAACAAGCAGGAATAGCATTCCACTAACAGTC
TCAAAGGCACCAAGCAGAAATACCTTGCAAGTAACATGGGCAAGACTTCCGGCTAATGTTCCAA
CCATCAAATGTGCAGATCGAGTTATCATATTGTTATCAGACTCCAGTGCATAATCCTTCAAGAA
ATATGTGTCAACAATATCATCACACTAACATCTTAAACCAAAGCAGATCAGAAAGTAACCTTCA
GGATAAGTTCTTTTGTAGTTCGGCTTGCTATTGTCACACTTCTTTGAATAACAGGGAGTATTAT
CTCCCTGTTAGCCTTATCCAAAGCCAAATCCATAATTCTAGATAAAGCAAATAATTTATCAACG
ACAAAAGAAGTTTCAAATAAAATAAAATAAAATCCTTTCAGAAACTTGGAAGCATACTTGCTAT
ACTGCAATTGTGGACCAATTGAGCCAAGCTTTGGGTTTATTTTGAAGCATATCTCATCACGTGG
AATAGCTGCCATAAGCTACATATCGCAAATGGAAAGCAAATCATATAACACGATCTAGTTGTTT
AGATAAATAAAAGCAGTTAAAACATTAAGGTAACCTGATTAACAGAGAATGGAGATGGTGATGG
TGATTGTGTTTGTGCTGGCAAAACCTGGGTCAAGGAGGACACTTGCTCAGGCATCATCAGAGCA
ACTTTGTCAGCTTCTACCGTGCTGTTTGTGGGTAGACGGACAGGAGCCACATACTGCAAACAAA
AGATATTCCAACTATAATGGCAGAAGTGTTACCACATCATAATTGATATAGAAGTTCAAAGCCA
AACCTGATTGAGTATATTTGGAAGACTCATAGCTCGGGATGTAATATTGATCTCAGGCTGCAGT
TCAACATGAGTTGATGAAGGAATAGTCCCTGGAAGAACTTCTGGAACCACAGGGGTTTGAGAGG
TAGTAACATCTTTATTTGAAAAATCCGGATTTCCTTCGACCTCGCGCAGACGATCTTTAAGCAG
GGAAGTTGGTTTCACATCCTTCATGTCAACTGTAAGATTCTTAAACAGAACCTGAAATCCCAAA
AGAACAGTTAGCATGAGCATGAGTAGCTAGGGCAGATACATGCCAATAAAGGAACTATCAAAAA
AGGAAATGTTGAGGACCTCGATATCAAATTTCAGATTCATCTTCAGGTTTGGAAGATTATAAAT
TTCAGCAAGTAGACTTAGAATTCCAATGGTCCAGGGATTTGGAGGACGATATGCGATACTTGAC
TGGCAAGGTTCAAGAATCTGCAGAGCAGCCAATAGTCATGACACATGATATGCGCCCAAAATCC
AAATTAATAATTGGAATTTCTTTGGATTAGTTTAATAAGATTATTTCCTTTCGAGAAATCTTTT
ACAAAAAAAAAGTTAGCGAGAATACACACCTTTGAAGTGAATGGTATGACCGCAATCATCAATC
CTTTCTCGTACGCCTGAAGAAAGAAATACTCGAAAGATTAAAGGCAGCCAAATTGAATCCATGG
AACTGAATTGTATCCCTCAATAAGCATGTAAATGTTTACCAAACCAACACAAACACAGGTGAAA
CAGAAATATCAAATTAAATAAATTATAGCAATACTAAATAAAAAGGCAGTAGATGGCCAAAGGG
AGCTTTCAGAACTCCAAATACTCAGGAGTTCAAAGAAGAGAAGTGTTCTCCTGCATGTTCAAGA
AAAAATGCAGAGGAGCAGTACCTCCACAATAAGAGATTTTGGGTCAATCTCCTTAGCCCTTAGT
GCCTGGTTCCTACCAATGGTGAACTTGCCCAACCAGCTGCCTAAGTTTTTTAGCAAGGAACGCT
CCTCAGAACTAGATTTGATAAGGTCTGATCTTAACAAGACCTGCAGCAGAAGTATCAAGTTTAA
ACAAAATCGCTAGCAAAAAATATGAACAGGGCAGACGAATTGGGGTGAACAAAAACCTTGCAGT
TCTCATACGTAGCCTTCAGCATTTCCTTGTTCAAGGATTTTGAGTTTAATTTATCAAAGAACTT
CAAATACAGATCATGGAAATTTGGTTCAATGCTTGCCCTGCCAAGATGAGAAGTAATTTGTATA
CCTCAGCATTGTCAGAGAAATCTATAATCAAGAATGATACCTTTTCATGACCATGTATTGTGCA
AACCAAGGATAATGTTGTTCCTGTATGACCTCATTAAATTCCTTTGCCTTAGCTTCCATGTTTG
AGATGGATATATTGTTGATCATAAAAAGAATCTTGTCCTGAACTTCAGGTGGAGGTGTCTAGGT
TAAGAGAAGTCCATTAGCACAGAACAAATCATGTATTACCCCAAAAGAGTAATACAAAACCAAC
CTCAATTGGTATATCTCTTTGTTCCGCTGCTGCAACAAGCGTCTCTATATTCAAAGCAGTCCCA
AATCCAGTAGTATATGAAGGCTGCCTCGGTAATC
						
					

			
		

Sequences
Splice junction sequence	ACCTCAATTGGTATATCTCTTTGTTCCGCTGCTGCAACAAGCGTCTCTATATTCAAAGCAGTCC CAAATCCAGTAGTATATGAAGGCTGCCTCGGTAATCctgacgtgttgccacagcctcaatgatg gcacagccaagatccagattatcgttgactagcatgtgaataatttgctcgatagtttcactgc cactcata
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1505 Transcript exons: 158440587-158440739,158440866-158440961,158441030-158441 135,158441220-158441305,158441389-158441535,158441614-15 8441853,158441947-158442075,158442216-158442263,15844252 8-158442674,158442755-158442863,158442931-158443076,1584 43147-158443244 CTGACGTGTTGCCACAGCCTCAATGATGGCACAGCCAAGATCCAGATTATCGTTGACTAGCATG TGAATAATTTGCTCGATAGTTTCACTGCCACTCATAAGGTTTTGAATGAGATTCCGAAGATTGG AATATAGTGCGACACGAAGAGGTTCCTTGCAAGTAACATGGGCAAGACTTCCGGCTAATGTTCC AACCATCAAATGTGCAGATCGAGTTATCATATTGTTATCAGACTCCAGTGCATAATCCTTCAGG ATAAGTTCTTTTGTAGTTCGGCTTGCTATTGTCACACTTCTTTGAATAACAGGGAGTATTATCT CCCTGTTAGCCTTATCCAAAGCCAAATCCATAATTTTGCTATACTGCAATTGTGGACCAATTGA GCCAAGCTTTGGGTTTATTTTGAAGCATATCTCATCACGTGGAATAGCTGCCATAAGCTGATTA ACAGAGAATGGAGATGGTGATGGTGATTGTGTTTGTGCTGGCAAAACCTGGGTCAAGGAGGACA CTTGCTCAGGCATCATCAGAGCAACTTTGTCAGCTTCTACCGTGCTGTTTGTGGGTAGACGGAC AGGAGCCACATACTGATTGAGTATATTTGGAAGACTCATAGCTCGGGATGTAATATTGATCTCA GGCTGCAGTTCAACATGAGTTGATGAAGGAATAGTCCCTGGAAGAACTTCTGGAACCACAGGGG TTTGAGAGGTAGTAACATCTTTATTTGAAAAATCCGGATTTCCTTCGACCTCGCGCAGACGATC TTTAAGCAGGGAAGTTGGTTTCACATCCTTCATGTCAACTGTAAGATTCTTAAACAGAACCTCG ATATCAAATTTCAGATTCATCTTCAGGTTTGGAAGATTATAAATTTCAGCAAGTAGACTTAGAA TTCCAATGGTCCAGGGATTTGGAGGACGATATGCGATACTTGACTGGCAAGGTTCAAGAATCTT TGAAGTGAATGGTATGACCGCAATCATCAATCCTTTCTCGTACGCCTCCACAATAAGAGATTTT GGGTCAATCTCCTTAGCCCTTAGTGCCTGGTTCCTACCAATGGTGAACTTGCCCAACCAGCTGC CTAAGTTTTTTAGCAAGGAACGCTCCTCAGAACTAGATTTGATAAGGTCTGATCTTAACAAGAC CTTGCAGTTCTCATACGTAGCCTTCAGCATTTCCTTGTTCAAGGATTTTGAGTTTAATTTATCA AAGAACTTCAAATACAGATCATGGAAATTTGGTTCAATGCTTGCCCTTTTCATGACCATGTATT GTGCAAACCAAGGATAATGTTGTTCCTGTATGACCTCATTAAATTCCTTTGCCTTAGCTTCCAT GTTTGAGATGGATATATTGTTGATCATAAAAAGAATCTTGTCCTGAACTTCAGGTGGAGGTGTC TCAATTGGTATATCTCTTTGTTCCGCTGCTGCAACAAGCGTCTCTATATTCAAAGCAGTCCCAA ATCCAGTAGTATATGAAGGCTGCCTCGGTAATC
Genomic sequence	CTGACGTGTTGCCACAGCCTCAATGATGGCACAGCCAAGATCCAGATTATCGTTGACTAGCATG TGAATAATTTGCTCGATAGTTTCACTGCCACTCATAAGGTTTTGAATGAGATTCCGAAGATTGG AATATAGTGCGACACGAAGAGGTTCCTATACCAGAGAAAAAGAAATACAATTATTAGTTGTGTT CAACAGATACAGAATGGTTAGGCTAATAGAATGAACAAGCAGGAATAGCATTCCACTAACAGTC TCAAAGGCACCAAGCAGAAATACCTTGCAAGTAACATGGGCAAGACTTCCGGCTAATGTTCCAA CCATCAAATGTGCAGATCGAGTTATCATATTGTTATCAGACTCCAGTGCATAATCCTTCAAGAA ATATGTGTCAACAATATCATCACACTAACATCTTAAACCAAAGCAGATCAGAAAGTAACCTTCA GGATAAGTTCTTTTGTAGTTCGGCTTGCTATTGTCACACTTCTTTGAATAACAGGGAGTATTAT CTCCCTGTTAGCCTTATCCAAAGCCAAATCCATAATTCTAGATAAAGCAAATAATTTATCAACG ACAAAAGAAGTTTCAAATAAAATAAAATAAAATCCTTTCAGAAACTTGGAAGCATACTTGCTAT ACTGCAATTGTGGACCAATTGAGCCAAGCTTTGGGTTTATTTTGAAGCATATCTCATCACGTGG AATAGCTGCCATAAGCTACATATCGCAAATGGAAAGCAAATCATATAACACGATCTAGTTGTTT AGATAAATAAAAGCAGTTAAAACATTAAGGTAACCTGATTAACAGAGAATGGAGATGGTGATGG TGATTGTGTTTGTGCTGGCAAAACCTGGGTCAAGGAGGACACTTGCTCAGGCATCATCAGAGCA ACTTTGTCAGCTTCTACCGTGCTGTTTGTGGGTAGACGGACAGGAGCCACATACTGCAAACAAA AGATATTCCAACTATAATGGCAGAAGTGTTACCACATCATAATTGATATAGAAGTTCAAAGCCA AACCTGATTGAGTATATTTGGAAGACTCATAGCTCGGGATGTAATATTGATCTCAGGCTGCAGT TCAACATGAGTTGATGAAGGAATAGTCCCTGGAAGAACTTCTGGAACCACAGGGGTTTGAGAGG TAGTAACATCTTTATTTGAAAAATCCGGATTTCCTTCGACCTCGCGCAGACGATCTTTAAGCAG GGAAGTTGGTTTCACATCCTTCATGTCAACTGTAAGATTCTTAAACAGAACCTGAAATCCCAAA AGAACAGTTAGCATGAGCATGAGTAGCTAGGGCAGATACATGCCAATAAAGGAACTATCAAAAA AGGAAATGTTGAGGACCTCGATATCAAATTTCAGATTCATCTTCAGGTTTGGAAGATTATAAAT TTCAGCAAGTAGACTTAGAATTCCAATGGTCCAGGGATTTGGAGGACGATATGCGATACTTGAC TGGCAAGGTTCAAGAATCTGCAGAGCAGCCAATAGTCATGACACATGATATGCGCCCAAAATCC AAATTAATAATTGGAATTTCTTTGGATTAGTTTAATAAGATTATTTCCTTTCGAGAAATCTTTT ACAAAAAAAAAGTTAGCGAGAATACACACCTTTGAAGTGAATGGTATGACCGCAATCATCAATC CTTTCTCGTACGCCTGAAGAAAGAAATACTCGAAAGATTAAAGGCAGCCAAATTGAATCCATGG AACTGAATTGTATCCCTCAATAAGCATGTAAATGTTTACCAAACCAACACAAACACAGGTGAAA CAGAAATATCAAATTAAATAAATTATAGCAATACTAAATAAAAAGGCAGTAGATGGCCAAAGGG AGCTTTCAGAACTCCAAATACTCAGGAGTTCAAAGAAGAGAAGTGTTCTCCTGCATGTTCAAGA AAAAATGCAGAGGAGCAGTACCTCCACAATAAGAGATTTTGGGTCAATCTCCTTAGCCCTTAGT GCCTGGTTCCTACCAATGGTGAACTTGCCCAACCAGCTGCCTAAGTTTTTTAGCAAGGAACGCT CCTCAGAACTAGATTTGATAAGGTCTGATCTTAACAAGACCTGCAGCAGAAGTATCAAGTTTAA ACAAAATCGCTAGCAAAAAATATGAACAGGGCAGACGAATTGGGGTGAACAAAAACCTTGCAGT TCTCATACGTAGCCTTCAGCATTTCCTTGTTCAAGGATTTTGAGTTTAATTTATCAAAGAACTT CAAATACAGATCATGGAAATTTGGTTCAATGCTTGCCCTGCCAAGATGAGAAGTAATTTGTATA CCTCAGCATTGTCAGAGAAATCTATAATCAAGAATGATACCTTTTCATGACCATGTATTGTGCA AACCAAGGATAATGTTGTTCCTGTATGACCTCATTAAATTCCTTTGCCTTAGCTTCCATGTTTG AGATGGATATATTGTTGATCATAAAAAGAATCTTGTCCTGAACTTCAGGTGGAGGTGTCTAGGT TAAGAGAAGTCCATTAGCACAGAACAAATCATGTATTACCCCAAAAGAGTAATACAAAACCAAC CTCAATTGGTATATCTCTTTGTTCCGCTGCTGCAACAAGCGTCTCTATATTCAAAGCAGTCCCA AATCCAGTAGTATATGAAGGCTGCCTCGGTAATC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.19077048

Conservation Information
Conserved circRNAs	NA
PMCS	0.19077048

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							158443225-158440643(+)
158443042-158443199(-)
						
						Potential amino acid sequence
						
							MKAASVILTCCHSLNDGTAKIQIIVD*(+)
MINNISISNMEAKAKEFNEVIQEQHYPWFAQYMVMKRASIEPNFHDLYLKFFDKLNSKSLNKEM
LKATYENCKVLLRSDLIKSSSEERSLLKNLGSWLGKFTIGRNQALRAKEIDPKSLIVEAYEKGL
MIAVIPFTSKILEPCQSSIAYRPPNPWTIGILSLLAEIYNLPNLKMNLKFDIEVLFKNLTVDMK
DVKPTSLLKDRLREVEGNPDFSNKDVTTSQTPVVPEVLPGTIPSSTHVELQPEINITSRAMSLP
NILNQYVAPVRLPTNSTVEADKVALMMPEQVSSLTQVLPAQTQSPSPSPFSVNQLMAAIPRDEI
CFKINPKLGSIGPQLQYSKIMDLALDKANREIILPVIQRSVTIASRTTKELILKDYALESDNNM
ITRSAHLMVGTLAGSLAHVTCKEPLRVALYSNLRNLIQNLMSGSETIEQIIHMLVNDNLDLGCA
IIEAVATRQDYRGSLHILLDLGLL*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	158443225-158440643(+) 158443042-158443199(-)
Potential amino acid sequence	MKAASVILTCCHSLNDGTAKIQIIVD(+) MINNISISNMEAKAKEFNEVIQEQHYPWFAQYMVMKRASIEPNFHDLYLKFFDKLNSKSLNKEM LKATYENCKVLLRSDLIKSSSEERSLLKNLGSWLGKFTIGRNQALRAKEIDPKSLIVEAYEKGL MIAVIPFTSKILEPCQSSIAYRPPNPWTIGILSLLAEIYNLPNLKMNLKFDIEVLFKNLTVDMK DVKPTSLLKDRLREVEGNPDFSNKDVTTSQTPVVPEVLPGTIPSSTHVELQPEINITSRAMSLP NILNQYVAPVRLPTNSTVEADKVALMMPEQVSSLTQVLPAQTQSPSPSPFSVNQLMAAIPRDEI CFKINPKLGSIGPQLQYSKIMDLALDKANREIILPVIQRSVTIASRTTKELILKDYALESDNNM ITRSAHLMVGTLAGSLAHVTCKEPLRVALYSNLRNLIQNLMSGSETIEQIIHMLVNDNLDLGCA IIEAVATRQDYRGSLHILLDLGLL(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b

circRNA

Detail information of Zm00001d048546_circ_g.3

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