Splice junction sequence |
ATGTACTCGGTGGTGATGAAAGGATCGTTAACAGCGACGAGCTCAACATCATCCCTCTGAAGAA CAACTCTAGCAACCAAACGACCGATTCTTCCGAAACcttcaagtgagcagcagccttgtctttg tcagtgaagacaccagtagactcaacaacaaagtcagctccagcctcaccccatgggatgtcct cagggttc
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 317 Transcript exons: 4609669-4609768,4609860-4609975,4610176-4610276 CTTCAAGTGAGCAGCAGCCTTGTCTTTGTCAGTGAAGACACCAGTAGACTCAACAACAAAGTCA GCTCCAGCCTCACCCCATGGGATGTCCTCAGGGTTCCTGATGCCGAAAACAGTGACTGGCTTCT CACCGAAGAGAAGAGTTTTGTCATCCTTCACCTTAAGCTCATGGTGCTTCCACTGACCGTGAAC ACTGTCATACTTAAACATGTATGTCATGTACTCGGTGGTGATGAAAGGATCGTTAACAGCGACG AGCTCAACATCATCCCTCTGAAGAACAACTCTAGCAACCAAACGACCGATTCTTCCGAAAC
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Genomic sequence |
CTTCAAGTGAGCAGCAGCCTTGTCTTTGTCAGTGAAGACACCAGTAGACTCAACAACAAAGTCA GCTCCAGCCTCACCCCATGGGATGTCCTCAGGGTTCCTTCAAAAATAAAACACCACAAATCAGA ATTTCACAACTCTCAATAACATAACAGAGAACCACTATAATAAAATCATCCATGATTATGTACC TGATGCCGAAAACAGTGACTGGCTTCTCACCGAAGAGAAGAGTTTTGTCATCCTTCACCTTAAG CTCATGGTGCTTCCACTGACCGTGAACACTGTCATACTTAAACATGTATGTCTGCAACAAATCG ATACCATATACACAATCAGTCAAAACGAATTTACAGAGAATCAACATAGAAGAAGAATACAACA AAGCAAGTTCTCAGATCTATATGATAAACAGCACACACCATCATGTATATTAACAAAAATTCAG ATAAAACTATTAACTCAAATCCAGATACGAACTAGTATCGAAGAGAAGAAGAAACGAACCATGT ACTCGGTGGTGATGAAAGGATCGTTAACAGCGACGAGCTCAACATCATCCCTCTGAAGAACAAC TCTAGCAACCAAACGACCGATTCTTCCGAAAC |