Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d046221_circ_g.1 |
ID in PlantcircBase | zma_circ_005877 |
Alias | tassel_test_circ_001225 |
Organism | Zea mays |
Position | chr9: 72873503-72873692 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d046221 |
Parent gene annotation |
ATP/GTP-binding protein family |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | NA |
Tissues | tassel |
Exon boundary | No-No |
Splicing signals | TC-AG |
Number of exons covered | Zm00001d046221_T035:1 Zm00001d046221_T051:1 Zm00001d046221_T038:1 Zm00001d046221_T042:1 Zm00001d046221_T032:1 Zm00001d046221_T016:1 Zm00001d046221_T033:1 Zm00001d046221_T040:1 Zm00001d046221_T021:1 Zm00001d046221_T046:1 Zm00001d046221_T002:1 Zm00001d046221_T039:1 Zm00001d046221_T045:1 Zm00001d046221_T050:1 Zm00001d046221_T043:1 Zm00001d046221_T014:1 Zm00001d046221_T037:1 Zm00001d046221_T044:1 Zm00001d046221_T036:1 Zm00001d046221_T053:1 Zm00001d046221_T041:1 Zm00001d046221_T052:1 Zm00001d046221_T034:1 Zm00001d046221_T047:1 Zm00001d046221_T018:1 Zm00001d046221_T017:1 Zm00001d046221_T030:1 Zm00001d046221_T031:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.089392463 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |