Plant Circular RNA Database

Detail information of Os09g0343200_circ_g.4

			
						 General Information
					
						CircRNA Name
						Os09g0343200_circ_g.4
					
						ID in PlantcircBase
						osa_circ_038889
					
						Alias
						Os09circ02967/Os_ciR740
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr9: 10618503-10619042  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, PcircRNA_finder, SMALT, Segemehl, find_circ
					
						Parent gene
						
							Os09g0343200						
					
						Parent gene annotation
						
							Ankyrin repeat containing protein. (Os09t0343200-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os09g0343200_circ_g.5 						
					
						Support reads
						45/41/25
					
						Tissues
						leaf and panicle/root/shoot, root, seed
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os09t0343200-01:1

General Information
CircRNA Name	Os09g0343200_circ_g.4
ID in PlantcircBase	osa_circ_038889
Alias	Os09circ02967/Os_ciR740
Organism	Oryza sativa
Position	chr9: 10618503-10619042 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, PcircRNA_finder, SMALT, Segemehl, find_circ
Parent gene	Os09g0343200
Parent gene annotation	Ankyrin repeat containing protein. (Os09t0343200-01)
Parent gene strand	-
Alternative splicing	Os09g0343200_circ_g.5
Support reads	45/41/25
Tissues	leaf and panicle/root/shoot, root, seed
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os09t0343200-01:1

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							Yes							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							F: TAACATGAGATGTTGGGACCTG
 R: CAGACGGGAATCTTTCGTACTC
PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	Yes Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	F: TAACATGAGATGTTGGGACCTG R: CAGACGGGAATCTTTCGTACTC PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAG
TGGTGACCCCGTCCAGATCCATGCCCGACTCTGCATcttggtcttgtagaacggctgcgtgcaa
tgcattttgtctatttgggccagagtacgaaagattcccgtctgtcatttgatgcaataacttt
gcaatgtc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 182
Transcript exons: 10618503-10618538,10618897-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTCTGCACTAACATGAGATGTTGGGACCTG
CTGTAGATGACGCCTGCACTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGA
GTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT
Transcript length: 207
Transcript exons: 10618503-10618605,10618939-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACTGCACTCCTCAAGTAGCCCGGGCCA
TCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCA
TGCCCGACTCTGCAT
Transcript length: 209
Transcript exons: 10618503-10618659,10618991-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGTACCTGTTGCATCCATAAGGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATC
CATGCCCGACTCTGCAT
Transcript length: 209
Transcript exons: 10618503-10618668,10619000-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCCTTCAGTGGTGACCCCGTCCAGATC
CATGCCCGACTCTGCAT
Transcript length: 212
Transcript exons: 10618503-10618555,10618884-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGCACCGTTGTTG
TTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAAGTAGCCCG
GGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAG
ATCCATGCCCGACTCTGCAT
Transcript length: 215
Transcript exons: 10618503-10618667,10618993-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGAGTGTTCCCTTCAGTGGTGACCCCGTC
CAGATCCATGCCCGACTCTGCAT
Transcript length: 223
Transcript exons: 10618503-10618539,10618857-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGCCCGGACAGCGCAGTGCAGAGGTGTGT
CACCGTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCT
CAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTG
ACCCCGTCCAGATCCATGCCCGACTCTGCAT
Transcript length: 228
Transcript exons: 10618503-10618703,10619016-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCAATTCTGAATAATATTTAAGAAGGT
TGGTGATTACGTCCAGATCCATGCCCGACTCTGCAT
Transcript length: 230
Transcript exons: 10618503-10618678,10618989-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCAATTCTGAAGTGCAGTGTTCCCTTC
AGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT
Transcript length: 242
Transcript exons: 10618503-10618588,10618887-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATCGTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGT
AGATGACGCCTGCACTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGC
AGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT
Transcript length: 244
Transcript exons: 10618503-10618670,10618967-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCACCGCAGGTGGCCACAACATGGAGT
GCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT
Transcript length: 246
Transcript exons: 10618503-10618640,10618935-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGCGCCTGCACTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGA
GTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT
Transcript length: 259
Transcript exons: 10618503-10618618,10618863-10618963,10619001-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGCAGCGCAGTGCA
GAGGTGTGTCACCGTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCC
TGCACTCCTCAAGTAGCCCGGGCCACTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTG
CAT
Transcript length: 262
Transcript exons: 10618503-10618604,10618883-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGATCACCGTTGTTGTTCTGCACTAACAT
GAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAAGTAGCCCGGGCCATCACCGCAG
GTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACT
CTGCAT
Transcript length: 267
Transcript exons: 10618503-10618637,10618911-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAAGTAGCCCGGGCCATCAC
CGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCATGCC
CGACTCTGCAT
Transcript length: 273
Transcript exons: 10618503-10618666,10618934-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGACGCCTGCACTCCTCAAGTAGCCCGGGC
CATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATC
CATGCCCGACTCTGCAT
Transcript length: 276
Transcript exons: 10618503-10618667,10618932-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGTGACGCCTGCACTCCTCAAGTAGCCCG
GGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAG
ATCCATGCCCGACTCTGCAT
Transcript length: 282
Transcript exons: 10618503-10618679,10618938-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCAATTCTGAATCTGCACTCCTCAAGT
AGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCC
GTCCAGATCCATGCCCGACTCTGCAT
Transcript length: 283
Transcript exons: 10618503-10618630,10618888-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
GTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAAG
TAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCC
CGTCCAGATCCATGCCCGACTCTGCAT
Transcript length: 294
Transcript exons: 10618503-10618618,10618865-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGGCGCAGTGCAGA
GGTGTGTCACCGTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCCTG
CACTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTC
AGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT
Transcript length: 296
Transcript exons: 10618503-10618645,10618890-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGTACCTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCC
TGCACTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCT
TCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT
Transcript length: 297
Transcript exons: 10618503-10618592,10618607-10618707,10618937-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTGTTGATGCAAGACAGCTAGGTACAACGGTGAAGTACC
TGTTGCATCCATAAGGAAGCCGGCCAATTCTGAATAATATTTAAGAAGGTTGGTGATTATATCC
CTGCACTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCC
TTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT
Transcript length: 301
Transcript exons: 10618503-10618640,10618855-10618955,10618981-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGAGCCCGGACAGCGCAGTGCAGAGGTGTGTCACCGTTGTTGTTCTGCACTAACAT
GAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAAGTAGCAACATGGAGTGCAGTGT
TCCCTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT
Transcript length: 316
Transcript exons: 10618503-10618665,10618890-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCTGTTGTTCTGCACTAACATGAGATGTTGG
GACCTGCTGTAGATGACGCCTGCACTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAA
CATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT
Transcript length: 337
Transcript exons: 10618503-10618693,10618897-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCAATTCTGAATAATATTTAAGAAGGC
TGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAAGTAGCCCGGGC
CATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATC
CATGCCCGACTCTGCAT
Transcript length: 540
Transcript exons: 10618503-10619042
CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCAATTCTGAATAATATTTAAGAAGGT
TGGTGATTATATCCTTATTTCCAATGCAGACGGCATCATGAAAGGCCGTCTCCTTACGGCAGTT
TTCCTTTCTCAGGAGTTCCTCCAGTCTCGCGCTGCTAGGGGAGTTGTCCTTAGTTTCAACCAGA
TCAATTAGATGATCAACCATTTTGGAATGGCCAGCCCGGACAGCGCAGTGCAGAGGTGTGTCAC
CGTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAA
GTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACC
CCGTCCAGATCCATGCCCGACTCTGCAT
						
					

						Genomic sequence
						
							CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT
CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC
AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCAATTCTGAATAATATTTAAGAAGGT
TGGTGATTATATCCTTATTTCCAATGCAGACGGCATCATGAAAGGCCGTCTCCTTACGGCAGTT
TTCCTTTCTCAGGAGTTCCTCCAGTCTCGCGCTGCTAGGGGAGTTGTCCTTAGTTTCAACCAGA
TCAATTAGATGATCAACCATTTTGGAATGGCCAGCCCGGACAGCGCAGTGCAGAGGTGTGTCAC
CGTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAA
GTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACC
CCGTCCAGATCCATGCCCGACTCTGCAT
						
					

			
		

Sequences
Splice junction sequence	CTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAG TGGTGACCCCGTCCAGATCCATGCCCGACTCTGCATcttggtcttgtagaacggctgcgtgcaa tgcattttgtctatttgggccagagtacgaaagattcccgtctgtcatttgatgcaataacttt gcaatgtc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 182 Transcript exons: 10618503-10618538,10618897-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTCTGCACTAACATGAGATGTTGGGACCTG CTGTAGATGACGCCTGCACTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGA GTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT Transcript length: 207 Transcript exons: 10618503-10618605,10618939-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACTGCACTCCTCAAGTAGCCCGGGCCA TCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCA TGCCCGACTCTGCAT Transcript length: 209 Transcript exons: 10618503-10618659,10618991-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGTACCTGTTGCATCCATAAGGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATC CATGCCCGACTCTGCAT Transcript length: 209 Transcript exons: 10618503-10618668,10619000-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCCTTCAGTGGTGACCCCGTCCAGATC CATGCCCGACTCTGCAT Transcript length: 212 Transcript exons: 10618503-10618555,10618884-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGCACCGTTGTTG TTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAAGTAGCCCG GGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAG ATCCATGCCCGACTCTGCAT Transcript length: 215 Transcript exons: 10618503-10618667,10618993-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGAGTGTTCCCTTCAGTGGTGACCCCGTC CAGATCCATGCCCGACTCTGCAT Transcript length: 223 Transcript exons: 10618503-10618539,10618857-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGCCCGGACAGCGCAGTGCAGAGGTGTGT CACCGTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCT CAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTG ACCCCGTCCAGATCCATGCCCGACTCTGCAT Transcript length: 228 Transcript exons: 10618503-10618703,10619016-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCAATTCTGAATAATATTTAAGAAGGT TGGTGATTACGTCCAGATCCATGCCCGACTCTGCAT Transcript length: 230 Transcript exons: 10618503-10618678,10618989-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCAATTCTGAAGTGCAGTGTTCCCTTC AGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT Transcript length: 242 Transcript exons: 10618503-10618588,10618887-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATCGTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGT AGATGACGCCTGCACTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGC AGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT Transcript length: 244 Transcript exons: 10618503-10618670,10618967-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCACCGCAGGTGGCCACAACATGGAGT GCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT Transcript length: 246 Transcript exons: 10618503-10618640,10618935-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGCGCCTGCACTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGA GTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT Transcript length: 259 Transcript exons: 10618503-10618618,10618863-10618963,10619001-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGCAGCGCAGTGCA GAGGTGTGTCACCGTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCC TGCACTCCTCAAGTAGCCCGGGCCACTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTG CAT Transcript length: 262 Transcript exons: 10618503-10618604,10618883-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGATCACCGTTGTTGTTCTGCACTAACAT GAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAAGTAGCCCGGGCCATCACCGCAG GTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACT CTGCAT Transcript length: 267 Transcript exons: 10618503-10618637,10618911-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAAGTAGCCCGGGCCATCAC CGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCATGCC CGACTCTGCAT Transcript length: 273 Transcript exons: 10618503-10618666,10618934-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGACGCCTGCACTCCTCAAGTAGCCCGGGC CATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATC CATGCCCGACTCTGCAT Transcript length: 276 Transcript exons: 10618503-10618667,10618932-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGTGACGCCTGCACTCCTCAAGTAGCCCG GGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAG ATCCATGCCCGACTCTGCAT Transcript length: 282 Transcript exons: 10618503-10618679,10618938-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCAATTCTGAATCTGCACTCCTCAAGT AGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCC GTCCAGATCCATGCCCGACTCTGCAT Transcript length: 283 Transcript exons: 10618503-10618630,10618888-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC GTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAAG TAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCC CGTCCAGATCCATGCCCGACTCTGCAT Transcript length: 294 Transcript exons: 10618503-10618618,10618865-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGGCGCAGTGCAGA GGTGTGTCACCGTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCCTG CACTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTC AGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT Transcript length: 296 Transcript exons: 10618503-10618645,10618890-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGTACCTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCC TGCACTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCT TCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT Transcript length: 297 Transcript exons: 10618503-10618592,10618607-10618707,10618937-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTGTTGATGCAAGACAGCTAGGTACAACGGTGAAGTACC TGTTGCATCCATAAGGAAGCCGGCCAATTCTGAATAATATTTAAGAAGGTTGGTGATTATATCC CTGCACTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCC TTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT Transcript length: 301 Transcript exons: 10618503-10618640,10618855-10618955,10618981-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGAGCCCGGACAGCGCAGTGCAGAGGTGTGTCACCGTTGTTGTTCTGCACTAACAT GAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAAGTAGCAACATGGAGTGCAGTGT TCCCTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT Transcript length: 316 Transcript exons: 10618503-10618665,10618890-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCTGTTGTTCTGCACTAACATGAGATGTTGG GACCTGCTGTAGATGACGCCTGCACTCCTCAAGTAGCCCGGGCCATCACCGCAGGTGGCCACAA CATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATCCATGCCCGACTCTGCAT Transcript length: 337 Transcript exons: 10618503-10618693,10618897-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCAATTCTGAATAATATTTAAGAAGGC TGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAAGTAGCCCGGGC CATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACCCCGTCCAGATC CATGCCCGACTCTGCAT Transcript length: 540 Transcript exons: 10618503-10619042 CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCAATTCTGAATAATATTTAAGAAGGT TGGTGATTATATCCTTATTTCCAATGCAGACGGCATCATGAAAGGCCGTCTCCTTACGGCAGTT TTCCTTTCTCAGGAGTTCCTCCAGTCTCGCGCTGCTAGGGGAGTTGTCCTTAGTTTCAACCAGA TCAATTAGATGATCAACCATTTTGGAATGGCCAGCCCGGACAGCGCAGTGCAGAGGTGTGTCAC CGTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAA GTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACC CCGTCCAGATCCATGCCCGACTCTGCAT
Genomic sequence	CTTGGTCTTGTAGAACGGCTGCGTGCAATGCATTTTGTCTATTTGGGCCAGAGTACGAAAGATT CCCGTCTGTCATTTGATGCAATAACTTTGCAATGTCGACCTGTTGATGCAAGACAGCTAGGTAC AACGGTGAAGTACCTGTTGCATCCATAAGGAAGCCGGCCAATTCTGAATAATATTTAAGAAGGT TGGTGATTATATCCTTATTTCCAATGCAGACGGCATCATGAAAGGCCGTCTCCTTACGGCAGTT TTCCTTTCTCAGGAGTTCCTCCAGTCTCGCGCTGCTAGGGGAGTTGTCCTTAGTTTCAACCAGA TCAATTAGATGATCAACCATTTTGGAATGGCCAGCCCGGACAGCGCAGTGCAGAGGTGTGTCAC CGTTGTTGTTCTGCACTAACATGAGATGTTGGGACCTGCTGTAGATGACGCCTGCACTCCTCAA GTAGCCCGGGCCATCACCGCAGGTGGCCACAACATGGAGTGCAGTGTTCCCTTCAGTGGTGACC CCGTCCAGATCCATGCCCGACTCTGCAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.586331693

Conservation Information
Conserved circRNAs	NA
PMCS	0.586331693

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							10618913-10618512(+)
10619028-10618579(+)
10618537-10618949(-)
10619030-10618505(-)
						
						Potential amino acid sequence
						
							MLGPAVDDACTPQVARAITAGGHNMECSVPFSGDPVQIHARLCILVL*(+)
MPDSASWSCRTAACNAFCLFGPEYERFPSVI*(+)
MHCTQPFYKTKMQSRAWIWTGSPLKGTLHSMLWPPAVMARAT*(-)
MDLDGVTTEGNTALHVVATCGDGPGYLRSAGVIYSRSQHLMLVQNNNGDTPLHCAVRAGHSKMV
DHLIDLVETKDNSPSSARLEELLRKENCRKETAFHDAVCIGNKDIITNLLKYYSELAGFLMDAT
GTSPLYLAVLHQQVDIAKLLHQMTDGNLSYSGPNRQNALHAAVLQDQDAESGMDLDGVTTEGNT
ALHVVATCGDGPGYLRSAGVIYSRSQHLMLVQNNNGDTPLHCAVRAGHSKMVDHLIDLVETKDN
SPSSARLEELLRKENCRKETAFHDAVCIGNKDIITNLLKYYSELAGFLMDATGTSPLYLAVLHQ
QVDIAKLLHQMTDGNLSYSGPNRQNALHAAVLQDQDAESGMDLDGVTTEGNTALHVVATCGDGP
GYLRSAGVIYSRSQHLMLVQNNNGDTPLHCAVRAGHSKMVDHLIDLVETKDNSPSSARLEELLR
KENCRKETAFHDAVCIGNKDIITNLLKYYSELAGFLMDATGTSPLYLAVLHQQVDIAKLLHQMT
DGNLSYSGPNRQNALHAAVLQDQDAESGMDLDGVTTEGNTALHVVATCGDGPGYLRSAGVIYSR
SQHLMLVQNNNGDTPLHCAVRAGHSKMVDHLIDLVETKDNSPSSARLEELLRKENCRKETAFHD
AVCIGNKDIITNLLKYYSELAGFLMDATGTSPLYLAVLHQQVDIAKLLHQMTDGNLSYSGPNRQ
NALHAAVLQDQ(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to Pi-starvation

Functional Information
Coding potential	Y
Potential coding position	10618913-10618512(+) 10619028-10618579(+) 10618537-10618949(-) 10619030-10618505(-)
Potential amino acid sequence	MLGPAVDDACTPQVARAITAGGHNMECSVPFSGDPVQIHARLCILVL(+) MPDSASWSCRTAACNAFCLFGPEYERFPSVI(+) MHCTQPFYKTKMQSRAWIWTGSPLKGTLHSMLWPPAVMARAT*(-) MDLDGVTTEGNTALHVVATCGDGPGYLRSAGVIYSRSQHLMLVQNNNGDTPLHCAVRAGHSKMV DHLIDLVETKDNSPSSARLEELLRKENCRKETAFHDAVCIGNKDIITNLLKYYSELAGFLMDAT GTSPLYLAVLHQQVDIAKLLHQMTDGNLSYSGPNRQNALHAAVLQDQDAESGMDLDGVTTEGNT ALHVVATCGDGPGYLRSAGVIYSRSQHLMLVQNNNGDTPLHCAVRAGHSKMVDHLIDLVETKDN SPSSARLEELLRKENCRKETAFHDAVCIGNKDIITNLLKYYSELAGFLMDATGTSPLYLAVLHQ QVDIAKLLHQMTDGNLSYSGPNRQNALHAAVLQDQDAESGMDLDGVTTEGNTALHVVATCGDGP GYLRSAGVIYSRSQHLMLVQNNNGDTPLHCAVRAGHSKMVDHLIDLVETKDNSPSSARLEELLR KENCRKETAFHDAVCIGNKDIITNLLKYYSELAGFLMDATGTSPLYLAVLHQQVDIAKLLHQMT DGNLSYSGPNRQNALHAAVLQDQDAESGMDLDGVTTEGNTALHVVATCGDGPGYLRSAGVIYSR SQHLMLVQNNNGDTPLHCAVRAGHSKMVDHLIDLVETKDNSPSSARLEELLRKENCRKETAFHD AVCIGNKDIITNLLKYYSELAGFLMDATGTSPLYLAVLHQQVDIAKLLHQMTDGNLSYSGPNRQ NALHAAVLQDQ(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to Pi-starvation

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os09g0343200_circ_g.4

Address

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