Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d037546_circ_g.1 |
| ID in PlantcircBase | zma_circ_002312 |
| Alias | circ1081 |
| Organism | Zea mays |
| Position | chr6: 128897346-128901573 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | u-circRNA |
| Identification method | CIRI |
| Parent gene | Zm00001d037546 |
| Parent gene annotation |
protein_coding |
| Parent gene strand | + |
| Alternative splicing | NA |
| Support reads | 2 |
| Tissues | seedling leaves |
| Exon boundary | No-Yes |
| Splicing signals | GT-CA |
| Number of exons covered | Zm00001d037546_T005:7 Zm00001d037546_T028:4 Zm00001d037546_T011:7 Zm00001d037546_T013:7 Zm00001d037546_T004:7 Zm00001d037546_T025:7 Zm00001d037546_T026:7 Zm00001d037546_T033:7 Zm00001d037546_T022:8 Zm00001d037546_T035:7 Zm00001d037546_T020:5 Zm00001d037546_T024:7 Zm00001d037546_T008:7 Zm00001d037546_T009:7 Zm00001d037546_T003:7 Zm00001d037546_T016:8 Zm00001d037546_T018:5 Zm00001d037546_T012:7 Zm00001d037546_T030:8 Zm00001d037546_T029:7 Zm00001d037546_T001:7 Zm00001d037546_T032:7 Zm00001d037546_T014:7 Zm00001d037546_T006:7 Zm00001d037546_T027:7 Zm00001d037546_T034:7 Zm00001d037546_T019:5 Zm00001d037546_T007:5 Zm00001d037546_T021:5 Zm00001d037546_T037:6 Zm00001d037546_T023:7 Zm00001d037546_T015:7 Zm00001d037546_T010:8 Zm00001d037546_T031:6 Zm00001d037546_T017:6 Zm00001d037546_T002:7 Zm00001d037546_T036:7 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.020104908 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Chen et al., 2017b |