Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d037546_circ_g.1 |
ID in PlantcircBase | zma_circ_002312 |
Alias | circ1081 |
Organism | Zea mays |
Position | chr6: 128897346-128901573 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d037546 |
Parent gene annotation |
protein_coding |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d037546_T005:7 Zm00001d037546_T028:4 Zm00001d037546_T011:7 Zm00001d037546_T013:7 Zm00001d037546_T004:7 Zm00001d037546_T025:7 Zm00001d037546_T026:7 Zm00001d037546_T033:7 Zm00001d037546_T022:8 Zm00001d037546_T035:7 Zm00001d037546_T020:5 Zm00001d037546_T024:7 Zm00001d037546_T008:7 Zm00001d037546_T009:7 Zm00001d037546_T003:7 Zm00001d037546_T016:8 Zm00001d037546_T018:5 Zm00001d037546_T012:7 Zm00001d037546_T030:8 Zm00001d037546_T029:7 Zm00001d037546_T001:7 Zm00001d037546_T032:7 Zm00001d037546_T014:7 Zm00001d037546_T006:7 Zm00001d037546_T027:7 Zm00001d037546_T034:7 Zm00001d037546_T019:5 Zm00001d037546_T007:5 Zm00001d037546_T021:5 Zm00001d037546_T037:6 Zm00001d037546_T023:7 Zm00001d037546_T015:7 Zm00001d037546_T010:8 Zm00001d037546_T031:6 Zm00001d037546_T017:6 Zm00001d037546_T002:7 Zm00001d037546_T036:7 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.020104908 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |