Plant Circular RNA Database

Detail information of Zm00001d012327_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d012327_circ_g.2
					
						ID in PlantcircBase
						zma_circ_009801
					
						Alias
						zma_circ_0002914, ZmciR342
					
						Organism
						
							Zea mays						
					
						Position
						
							chr8: 172503483-172507887  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ, CIRI2
					
						Parent gene
						
							Zm00001d012327						
					
						Parent gene annotation
						
							Probable ubiquitin-like-specific protease 2B
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d012327_circ_g.1 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d012327_T001:3

General Information
CircRNA Name	Zm00001d012327_circ_g.2
ID in PlantcircBase	zma_circ_009801
Alias	zma_circ_0002914, ZmciR342
Organism	Zea mays
Position	chr8: 172503483-172507887 JBrowse»
Reference genome	AGPv4.38
Type	e-circRNA
Identification method	find_circ, CIRI2
Parent gene	Zm00001d012327
Parent gene annotation	Probable ubiquitin-like-specific protease 2B
Parent gene strand	+
Alternative splicing	Zm00001d012327_circ_g.1
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d012327_T001:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GAGCACGATTTTCTCTTGATGATTCGCAATGGCCAAGGAGACAACAGAGGATTTGGGAACTGGG
ACCAAGATATCAAGAAATATGGAAAGACATCCCATCgttgacaaagacggagttgtgcttactc
ctgccttcatgatatgtgacaaaactttgtatcttgaacctcacctcactttctcattggacgg
gatcaaga

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 368
Transcript exons: 172503483-172503683,172503768-172503825,172507779-172507
887
GTTGACAAAGACGGAGTTGTGCTTACTCCTGCCTTCATGATATGTGACAAAACTTTGTATCTTG
AACCTCACCTCACTTTCTCATTGGACGGGATCAAGATTGAGTATTTGGATTTAGATTCCTTTGA
AGACGAGAAGCTGTCAGCTCTACAATGGGAAATATCTAATATTATTTCCATCAGTTGTAAATGG
ACTCGTAGTGTTGGATCTGCCTTAATAACACTCCTTGTTGGATCTACAGCAGAAACAGGAAATG
CAGGTCCTGTTAGAGCACGATTTTCTCTTGATGATTCGCAATGGCCAAGGAGACAACAGAGGAT
TTGGGAACTGGGACCAAGATATCAAGAAATATGGAAAGACATCCCATC
						
					

						Genomic sequence
						
							GTTGACAAAGACGGAGTTGTGCTTACTCCTGCCTTCATGATATGTGACAAAACTTTGTATCTTG
AACCTCACCTCACTTTCTCATTGGACGGGATCAAGATTGAGTATTTGGATTTAGATTCCTTTGA
AGACGAGAAGCTGTCAGCTCTACAATGGGAAATATCTAATATTATTTCCATCAGTTGTAAATGG
ACTCGTAGTGTAAGCAATTCACTTTATTTCTGTCACTATTACTCTTATTTCATGTGTTTCATAG
TTTTCAATACCTATTATCATCCTAACCAGGTTGGATCTGCCTTAATAACACTCCTTGTTGGATC
TACAGCAGAAACAGGAAATGCAGGTATCATATGCGTTCAAGATATTGTATTCCAGATTTATCTG
TTTTCCTCCATATTAATGTTGCATGGCATAATTTTTTCTACACGAGGCAACCCCATTTCCCTTG
TAGCATAACAGAAATACATGAGTTTGTTCAGGTCAGCAAAGAAAAAATGATGCATGACATATAT
CTGTTCCTAATACTAAAGTGGCAACATGAATTTGTGTCCTTCGTTTTTTTTGTATTTGACCACG
ATCATTTTTTGGCCATCTGTATTTTTATTGGGGTCACATTTTTTCTTCGTCGGTTGTTTTTGCT
TTTCCCTGATTTTCTCTCTTCTGTCCGTCATTTTTTTCCAGTGTCATGCTTAATTTTTTGTTCT
ATTTTTTCTTTGAACGCTGTCAGAGGGGGGGGGGTGGTCGTTTTTTGGAGGAAACCAATAGTAG
GAGGGGAACATAAAGATAATTATGACAAAAAAAAGATGTGAAAAAACAATGATGAAAAAGGCAA
CATCATGGGCTTTTGAACCCTTGACCCTTCCTTGAAGAGGTTGATGGTCAAACTAAAGAAACCG
TTAACTGAGACTTTGATGGTTCGTTGTCCAGTCAGATCTAACTAACTGTGCTCTTTGGCTGTAC
ACATGCATTAGTGGAATCCACAGCTAGTGTGGCACATGGAAAATCGAGAGAGGTCTAGTTATCA
TGTTTGATGGAAGTGTAACAATATTTCTGCCACTAGCAGAGGTCAACATCATGGTTTTTAAAGC
GGTAAGGCTAGACAAGGCGTTGGAACGCCTAGACTGCGCCTAGGCAGGCAAGGCACCTAGGATT
TTTTGGGCGCCTGGACGCCTAGGCGACGCCTTTAAAACACTGGTCAACATTAGTTTTCTGTCTT
CAATAGAAAATTCTATGTTGTCCCCTCCCCTGTCGCATTCTCTGTGATCTGAAATTATTATGAT
CTTGTAAAATAGTACAACAGTTTGTCTTGCGCAGTAGTTTGTGTATTTTACGCTTATGAGGTGG
CTGAGGGCGTTTCATTGTTTTCGTTTCCATTTCATTTTGTGTTTTGTTCAGGAAAATGTAAACT
GAGACTAGTACTGAGTGTCAAAATAACATTCGTTTTTAAGTTCATCGGGTTAGATTTTATTTTT
TATTTTCACATGTGTATTAGCTAGCTTGAAATAGTATCAAGTACTAAGTAGCAATGTAGCATAA
GTTTGAGGTGATTTGGACATTTGGCCTTGCCATCCTTTTTCTATCTAAAAGATATATTGGGTGT
TGACTAGAAAAAATCATATGTGCATTGCAACAGCAAAACAGACCAAACAATTAAACATGCGCAC
ACAGTTCTTGTAAGAATGGTGTCACTTAGAAAATACAAACGAGAAAACATGTAACTATTACCAT
TGACAAATGAAATAACACAGTCAGAAAATCCCCCATACTTAGAGTCAGAGGCAAGGTGGGTAAA
TAAGAAAAAAGTTTTGGGGGCAGAGTGGTGGTGATGGCACACCATCACCACCAACTCCTGTTTT
AGTTAGCAGAAAAATGTATCGGTTTTGCACATTTTCAACCTTCAAAAGTCTAGCCCTACATATG
CCACTATAATGGCAGCCTATGATGCTCACTATCATGGTGTCTAAATTTGCCATTAGCAGCCCAT
TACCCATCCAACGGTTCCCCACACCTCTTACCAGGGGCCTCCCAATGGTCACACTGTAGTTATT
CTAGCAGTGGCTCTGTGTTAAACCATCTGCTTTTCATGGAGTGCACACAGCGGCTAGCAATGCA
GAATGGAGAGGGCATTTTCCTCTGCATGGTGTAGGATGGAGCCAGATGCATCCTGTCTGGAATG
CATCCCACCACTAGTGTTCATGTTGGTGGACATGGTTTTCAAGGAACCTCCTATGTGGCATGTC
AAGGCTGTGCTAGGGGCATTGCCACTGTGGTGACAGCTCTTCCCTTGCTGCTGCCGAATCCCCC
AGATTGCGTTGGAGATGAGGTAGCTGTAGGCGTGGAAGACACTTGTGGAGGTGAGTAGTTGTTC
ATGATTATGGAGCTGAGGGATAGGCATGGTAGTGCAGGTGACGGCAAGCAGAGTGGAGGTGGAA
AAGGTGGGGCAAAGATTCATAGGTACTTTCTTTACGTCACATGTATGCTTGAGATGTTTCTGGG
CTCGTTGGCTACTGTGGGATAGCCGGATAGGGGTAGGTGGTTCTTCCATCTTTTGCCCTTTTCC
CATCCCTTTGTGTTTGTCATTTCTATCTAATCACCTCTAGGTTCTGTTTTTATGCCATCCATTC
GACAAGTGTTGAGCACTTCTGTGGTATGAAGGTGGCAGATTGCCTCTCTATTTATTAACTTAAT
AATCATGATTCGGGGATTGTGCTTAAATATCTCCAGATTCGGGTGCACCATCTTTGGGTGGCTT
GGATAGCATCGCTTCGAGTTGCAACTACTCAAACAATCCATGTATTTTTCTCACTGCCTATCCA
TGTCCATGCAAAGAGGGGGGGGGAGTAAAGGGGGCATTATGATCATTTACAAAAAAACTCGATT
TGCGGGGGTAAAGACAACCCTCGAGCATTGTATTAAGAGAAGACCTTCTCACACAGGTCGAGAA
CCCTTCAGACCCTTGCCCCACCCATACACAACGACAACGTAGCCTATGTGAGAACGACCACGAA
CAGGCTGGGACCTTAGACCTCTGCTTTGGCGTGAGATAGATGGATGGGATTTTTTTAACCCCAG
CCTGAAATCTGCTCTCAGGGGGAATCAAAATTAGGACCTAAGGAGTGCTACTCAGACCACCTAA
CCAACTCAGCTAGAGGCCCTTTCACATTTGCGATCATTTACATTGCATAATTTTTCCTTCTATT
CTTGTAGGTTGAGAGAACTCTTGTGCTTTCTTGTGAAGAGCTTGAACTTAGATATTTTTAATGG
AAAATCTCAAATTGAGGGTCCGATAATTGTTAAACATGTCATTTTCCTTGAGTTATGCTTGCTC
TTTCCATTTGAGGTTTGGTCTCAACATGAGATCTTGTTTTGTTGCATACATCTAATCTAAGATG
TTTGCATAGTTTATTAAGAAAAACGACAGTAACTCTAATGGATAAGTAATAAGCAACTTTTCTT
TACTATATTAAAGCACCAGTTTCCATGGTTCAATGGTTCCACCGTCGTCACTTTAGCAAAAAGC
TCCTTATAATTTTTAAATCAAACCCGCGCTCCAGCCGGCCTATTCTATCTCACCGAGCACATGT
CTATGGCTCCTCTAGGCAAAGCGAAACACAGTCTAAGGCCTCCTTTGAATCAAAGGATAATTTC
CTGAATCATGCGTTTTTCCTGTGTTTTTGAACTAATTCCTGTGAAATTCCTATATCATTCCTAT
GAAATTCTTACGTACCAAAGGAGACCTAAACTGTAGATACACATGTGGTCATGTGGAACATTTG
TTCTTCGGCCTCCTACAGCCAATGCAGTGCAGGATGAGTCATGTGATGACATATGCTTTTGTTG
CCCATTGACCTCAGACTGCGAGTACCTATCACCTGCAGGCAGAGGTGACAACAGGCATCTTCAA
ATTTTCTTTTATATATCCAGCTTTCAAGTGGATTTAGAAGTCTATCATGTTACCTGTATACTTT
GTGCTGATGCTTATGCACAATGAGTACTAGAGTTCTTTCTCGAAAGTCCTTTCAATTGCTTGAA
TGTTCCTAGGCTAGCAAACGATTCAGCCCTTGTACCCAATAGAGATCAATGTTGTAGCTTGCAA
GCTTGACCAATTTAAATAGAGCACAAATTACTGTAAAGGTTTGGAACGTATTTGAACAACTGTC
CCATTTAAATAACGTCTACCTATATATAGAAACCGCAGCAACGCACGGGCACTTAACTAGTATA
TGTATATTGTTGAGATTGAGATACTCCTTGCTTCTTACCAGCCAGCTTGTTTTTCTTTTTTATT
TTCGACAGGTCCTGTTAGAGCACGATTTTCTCTTGATGATTCGCAATGGCCAAGGAGACAACAG
AGGATTTGGGAACTGGGACCAAGATATCAAGAAATATGGAAAGACATCCCATC
						
					

			
		

Sequences
Splice junction sequence	GAGCACGATTTTCTCTTGATGATTCGCAATGGCCAAGGAGACAACAGAGGATTTGGGAACTGGG ACCAAGATATCAAGAAATATGGAAAGACATCCCATCgttgacaaagacggagttgtgcttactc ctgccttcatgatatgtgacaaaactttgtatcttgaacctcacctcactttctcattggacgg gatcaaga
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 368 Transcript exons: 172503483-172503683,172503768-172503825,172507779-172507 887 GTTGACAAAGACGGAGTTGTGCTTACTCCTGCCTTCATGATATGTGACAAAACTTTGTATCTTG AACCTCACCTCACTTTCTCATTGGACGGGATCAAGATTGAGTATTTGGATTTAGATTCCTTTGA AGACGAGAAGCTGTCAGCTCTACAATGGGAAATATCTAATATTATTTCCATCAGTTGTAAATGG ACTCGTAGTGTTGGATCTGCCTTAATAACACTCCTTGTTGGATCTACAGCAGAAACAGGAAATG CAGGTCCTGTTAGAGCACGATTTTCTCTTGATGATTCGCAATGGCCAAGGAGACAACAGAGGAT TTGGGAACTGGGACCAAGATATCAAGAAATATGGAAAGACATCCCATC
Genomic sequence	GTTGACAAAGACGGAGTTGTGCTTACTCCTGCCTTCATGATATGTGACAAAACTTTGTATCTTG AACCTCACCTCACTTTCTCATTGGACGGGATCAAGATTGAGTATTTGGATTTAGATTCCTTTGA AGACGAGAAGCTGTCAGCTCTACAATGGGAAATATCTAATATTATTTCCATCAGTTGTAAATGG ACTCGTAGTGTAAGCAATTCACTTTATTTCTGTCACTATTACTCTTATTTCATGTGTTTCATAG TTTTCAATACCTATTATCATCCTAACCAGGTTGGATCTGCCTTAATAACACTCCTTGTTGGATC TACAGCAGAAACAGGAAATGCAGGTATCATATGCGTTCAAGATATTGTATTCCAGATTTATCTG TTTTCCTCCATATTAATGTTGCATGGCATAATTTTTTCTACACGAGGCAACCCCATTTCCCTTG TAGCATAACAGAAATACATGAGTTTGTTCAGGTCAGCAAAGAAAAAATGATGCATGACATATAT CTGTTCCTAATACTAAAGTGGCAACATGAATTTGTGTCCTTCGTTTTTTTTGTATTTGACCACG ATCATTTTTTGGCCATCTGTATTTTTATTGGGGTCACATTTTTTCTTCGTCGGTTGTTTTTGCT TTTCCCTGATTTTCTCTCTTCTGTCCGTCATTTTTTTCCAGTGTCATGCTTAATTTTTTGTTCT ATTTTTTCTTTGAACGCTGTCAGAGGGGGGGGGGTGGTCGTTTTTTGGAGGAAACCAATAGTAG GAGGGGAACATAAAGATAATTATGACAAAAAAAAGATGTGAAAAAACAATGATGAAAAAGGCAA CATCATGGGCTTTTGAACCCTTGACCCTTCCTTGAAGAGGTTGATGGTCAAACTAAAGAAACCG TTAACTGAGACTTTGATGGTTCGTTGTCCAGTCAGATCTAACTAACTGTGCTCTTTGGCTGTAC ACATGCATTAGTGGAATCCACAGCTAGTGTGGCACATGGAAAATCGAGAGAGGTCTAGTTATCA TGTTTGATGGAAGTGTAACAATATTTCTGCCACTAGCAGAGGTCAACATCATGGTTTTTAAAGC GGTAAGGCTAGACAAGGCGTTGGAACGCCTAGACTGCGCCTAGGCAGGCAAGGCACCTAGGATT TTTTGGGCGCCTGGACGCCTAGGCGACGCCTTTAAAACACTGGTCAACATTAGTTTTCTGTCTT CAATAGAAAATTCTATGTTGTCCCCTCCCCTGTCGCATTCTCTGTGATCTGAAATTATTATGAT CTTGTAAAATAGTACAACAGTTTGTCTTGCGCAGTAGTTTGTGTATTTTACGCTTATGAGGTGG CTGAGGGCGTTTCATTGTTTTCGTTTCCATTTCATTTTGTGTTTTGTTCAGGAAAATGTAAACT GAGACTAGTACTGAGTGTCAAAATAACATTCGTTTTTAAGTTCATCGGGTTAGATTTTATTTTT TATTTTCACATGTGTATTAGCTAGCTTGAAATAGTATCAAGTACTAAGTAGCAATGTAGCATAA GTTTGAGGTGATTTGGACATTTGGCCTTGCCATCCTTTTTCTATCTAAAAGATATATTGGGTGT TGACTAGAAAAAATCATATGTGCATTGCAACAGCAAAACAGACCAAACAATTAAACATGCGCAC ACAGTTCTTGTAAGAATGGTGTCACTTAGAAAATACAAACGAGAAAACATGTAACTATTACCAT TGACAAATGAAATAACACAGTCAGAAAATCCCCCATACTTAGAGTCAGAGGCAAGGTGGGTAAA TAAGAAAAAAGTTTTGGGGGCAGAGTGGTGGTGATGGCACACCATCACCACCAACTCCTGTTTT AGTTAGCAGAAAAATGTATCGGTTTTGCACATTTTCAACCTTCAAAAGTCTAGCCCTACATATG CCACTATAATGGCAGCCTATGATGCTCACTATCATGGTGTCTAAATTTGCCATTAGCAGCCCAT TACCCATCCAACGGTTCCCCACACCTCTTACCAGGGGCCTCCCAATGGTCACACTGTAGTTATT CTAGCAGTGGCTCTGTGTTAAACCATCTGCTTTTCATGGAGTGCACACAGCGGCTAGCAATGCA GAATGGAGAGGGCATTTTCCTCTGCATGGTGTAGGATGGAGCCAGATGCATCCTGTCTGGAATG CATCCCACCACTAGTGTTCATGTTGGTGGACATGGTTTTCAAGGAACCTCCTATGTGGCATGTC AAGGCTGTGCTAGGGGCATTGCCACTGTGGTGACAGCTCTTCCCTTGCTGCTGCCGAATCCCCC AGATTGCGTTGGAGATGAGGTAGCTGTAGGCGTGGAAGACACTTGTGGAGGTGAGTAGTTGTTC ATGATTATGGAGCTGAGGGATAGGCATGGTAGTGCAGGTGACGGCAAGCAGAGTGGAGGTGGAA AAGGTGGGGCAAAGATTCATAGGTACTTTCTTTACGTCACATGTATGCTTGAGATGTTTCTGGG CTCGTTGGCTACTGTGGGATAGCCGGATAGGGGTAGGTGGTTCTTCCATCTTTTGCCCTTTTCC CATCCCTTTGTGTTTGTCATTTCTATCTAATCACCTCTAGGTTCTGTTTTTATGCCATCCATTC GACAAGTGTTGAGCACTTCTGTGGTATGAAGGTGGCAGATTGCCTCTCTATTTATTAACTTAAT AATCATGATTCGGGGATTGTGCTTAAATATCTCCAGATTCGGGTGCACCATCTTTGGGTGGCTT GGATAGCATCGCTTCGAGTTGCAACTACTCAAACAATCCATGTATTTTTCTCACTGCCTATCCA TGTCCATGCAAAGAGGGGGGGGGAGTAAAGGGGGCATTATGATCATTTACAAAAAAACTCGATT TGCGGGGGTAAAGACAACCCTCGAGCATTGTATTAAGAGAAGACCTTCTCACACAGGTCGAGAA CCCTTCAGACCCTTGCCCCACCCATACACAACGACAACGTAGCCTATGTGAGAACGACCACGAA CAGGCTGGGACCTTAGACCTCTGCTTTGGCGTGAGATAGATGGATGGGATTTTTTTAACCCCAG CCTGAAATCTGCTCTCAGGGGGAATCAAAATTAGGACCTAAGGAGTGCTACTCAGACCACCTAA CCAACTCAGCTAGAGGCCCTTTCACATTTGCGATCATTTACATTGCATAATTTTTCCTTCTATT CTTGTAGGTTGAGAGAACTCTTGTGCTTTCTTGTGAAGAGCTTGAACTTAGATATTTTTAATGG AAAATCTCAAATTGAGGGTCCGATAATTGTTAAACATGTCATTTTCCTTGAGTTATGCTTGCTC TTTCCATTTGAGGTTTGGTCTCAACATGAGATCTTGTTTTGTTGCATACATCTAATCTAAGATG TTTGCATAGTTTATTAAGAAAAACGACAGTAACTCTAATGGATAAGTAATAAGCAACTTTTCTT TACTATATTAAAGCACCAGTTTCCATGGTTCAATGGTTCCACCGTCGTCACTTTAGCAAAAAGC TCCTTATAATTTTTAAATCAAACCCGCGCTCCAGCCGGCCTATTCTATCTCACCGAGCACATGT CTATGGCTCCTCTAGGCAAAGCGAAACACAGTCTAAGGCCTCCTTTGAATCAAAGGATAATTTC CTGAATCATGCGTTTTTCCTGTGTTTTTGAACTAATTCCTGTGAAATTCCTATATCATTCCTAT GAAATTCTTACGTACCAAAGGAGACCTAAACTGTAGATACACATGTGGTCATGTGGAACATTTG TTCTTCGGCCTCCTACAGCCAATGCAGTGCAGGATGAGTCATGTGATGACATATGCTTTTGTTG CCCATTGACCTCAGACTGCGAGTACCTATCACCTGCAGGCAGAGGTGACAACAGGCATCTTCAA ATTTTCTTTTATATATCCAGCTTTCAAGTGGATTTAGAAGTCTATCATGTTACCTGTATACTTT GTGCTGATGCTTATGCACAATGAGTACTAGAGTTCTTTCTCGAAAGTCCTTTCAATTGCTTGAA TGTTCCTAGGCTAGCAAACGATTCAGCCCTTGTACCCAATAGAGATCAATGTTGTAGCTTGCAA GCTTGACCAATTTAAATAGAGCACAAATTACTGTAAAGGTTTGGAACGTATTTGAACAACTGTC CCATTTAAATAACGTCTACCTATATATAGAAACCGCAGCAACGCACGGGCACTTAACTAGTATA TGTATATTGTTGAGATTGAGATACTCCTTGCTTCTTACCAGCCAGCTTGTTTTTCTTTTTTATT TTCGACAGGTCCTGTTAGAGCACGATTTTCTCTTGATGATTCGCAATGGCCAAGGAGACAACAG AGGATTTGGGAACTGGGACCAAGATATCAAGAAATATGGAAAGACATCCCATC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.163268293

Conservation Information
Conserved circRNAs	NA
PMCS	0.163268293

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							172503520-172503519(+)
172503821-172503484(+)
172507817-172503519(+)
172503522-172507787(-)
						
						Potential amino acid sequence
						
							MICDKTLYLEPHLTFSLDGIKIEYLDLDSFEDEKLSALQWEISNIISISCKWTRSVGSALITLL
VGSTAETGNAGPVRARFSLDDSQWPRRQQRIWELGPRYQEIWKDIPSLTKTELCLLLPS*(+)
MQVLLEHDFLLMIRNGQGDNRGFGNWDQDIKKYGKTSHR*(+)
MAKETTEDLGTGTKISRNMERHPIVDKDGVVLTPAFMICDKTLYLEPHLTFSLDGIKIEYLDLD
SFEDEKLSALQWEISNIISISCKWTRSVGSALITLLVGSTAETGNAGPVRARFSLDDSQWPRRQ
QRIWELGPRYQEIWKDIPSLTKTELCLLLPS*(+)
MKAGVSTTPSLSTMGCLSIFLDILVPVPKSSVVSLAIANHQEKIVL*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to drought stress

Functional Information
Coding potential	Y
Potential coding position	172503520-172503519(+) 172503821-172503484(+) 172507817-172503519(+) 172503522-172507787(-)
Potential amino acid sequence	MICDKTLYLEPHLTFSLDGIKIEYLDLDSFEDEKLSALQWEISNIISISCKWTRSVGSALITLL VGSTAETGNAGPVRARFSLDDSQWPRRQQRIWELGPRYQEIWKDIPSLTKTELCLLLPS(+) MQVLLEHDFLLMIRNGQGDNRGFGNWDQDIKKYGKTSHR(+) MAKETTEDLGTGTKISRNMERHPIVDKDGVVLTPAFMICDKTLYLEPHLTFSLDGIKIEYLDLD SFEDEKLSALQWEISNIISISCKWTRSVGSALITLLVGSTAETGNAGPVRARFSLDDSQWPRRQ QRIWELGPRYQEIWKDIPSLTKTELCLLLPS(+) MKAGVSTTPSLSTMGCLSIFLDILVPVPKSSVVSLAIANHQEKIVL(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to drought stress

			
						 Other Information
					
						References
						Ma et al., 2021b;Zhang et al., 2019

circRNA

Detail information of Zm00001d012327_circ_g.2

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