Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G04970_circ_g.1 |
ID in PlantcircBase | ath_circ_000745 |
Alias | Chr1:1412159|1412904 |
Organism | Arabidpsis thaliana |
Position | chr1: 1412159-1412904 JBrowse» |
Reference genome | TAIR10.38 |
Type | ei-circRNA |
Identification method | CIRCexplorer; CIRI |
Parent gene | AT1G04970 |
Parent gene annotation |
Putative BPI/LBP family protein At1g04970 |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 3 |
Tissues | seedling |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | AT1G04970.2:2 AT1G04970.1:2 AT1G04970.3:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.161555607 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to methyl jasmonate (validated) |
Other Information | |
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References | Zhang et al., 2020 |