Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d047253_circ_g.2 |
ID in PlantcircBase | zma_circ_000483 |
Alias | NA |
Organism | Zea mays |
Position | chr9: 124179337-124179441 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Zm00001d047253 |
Parent gene annotation |
sucrose synthase1 |
Parent gene strand | - |
Alternative splicing | Zm00001d047253_circ_g.3 Zm00001d047253_circ_g.4 |
Support reads | 2 |
Tissues | shoot |
Exon boundary | Yes-No |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d047253_T012:1 Zm00001d047253_T008:1 Zm00001d047253_T018:1 Zm00001d047253_T007:1 Zm00001d047253_T004:1 Zm00001d047253_T009:1 Zm00001d047253_T019:1 Zm00001d047253_T010:1 Zm00001d047253_T005:1 Zm00001d047253_T002:1 Zm00001d047253_T016:1 Zm00001d047253_T001:1 Zm00001d047253_T014:1 Zm00001d047253_T015:1 Zm00001d047253_T011:1 Zm00001d047253_T003:1 Zm00001d047253_T013:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.42009574 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |