Plant Circular RNA Database

Detail information of orai.004G190200_circ_g.1

			
						 General Information
					
						CircRNA Name
						orai.004G190200_circ_g.1
					
						ID in PlantcircBase
						gra_circ_000381
					
						Alias
						Chr04:50580726|50583537
					
						Organism
						
							Gossypium raimondii						
					
						Position
						
							chrChr04: 50580726-50583537  JBrowse»						
					
						Reference genome
						
							Graimondii_221						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Gorai.004G190200						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						7
					
						Tissues
						ovule
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Gorai.004G190200.2:5
Gorai.004G190200.1:6

General Information
CircRNA Name	orai.004G190200_circ_g.1
ID in PlantcircBase	gra_circ_000381
Alias	Chr04:50580726\|50583537
Organism	Gossypium raimondii
Position	chrChr04: 50580726-50583537 JBrowse»
Reference genome	Graimondii_221
Type	e-circRNA
Identification method	CIRI
Parent gene	Gorai.004G190200
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	NA
Support reads	7
Tissues	ovule
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Gorai.004G190200.2:5 Gorai.004G190200.1:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CAAGAACCTCCAGTAGAGCTGAAGCTGGATCACCACGCACATCAGAACCTGTCTTGTCAATCTC
GTCCAATAGCATGACTGGGTTGCAAACAGCTACTCTctctaggttggaaagcacagacgcaggt
acttcaactaagtcctttagatttctctctggtagaataactctcttgataccatgacggtgtg
ctgctagt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1191
Transcript exons: 50580726-50580827,50581022-50581267,50581682-50581876,50
582122-50582424,50582927-50583140,50583407-50583537
CTCTAGGTTGGAAAGCACAGACGCAGGTACTTCAACTAAGTCCTTTAGATTTCTCTCTGGTAGA
ATAACTCTCTTGATACCATGACGGTGTGCTGCTAGTATCTTATCCTTAATACCACCGACAGGTA
ACACAAGACCTCTCAGTGTCATTTCTCCAGTCATTGCGGTATCTGCTCTTACACATTTCTGACT
AAACAAAGAAACCAGTGCCGTTACAAGCGTCACACCGGCTGATGGCCCATCCTTTGGTACAGCC
CCAGCTGGAAAATGTATATGAATATCTCTACCCTGCAGCACATTTTTTTCCTCTGCAGGTGCCA
ACTTAAGATCTGCTGCCCTGGCTCTCACCCATGTCAATGCTATTTTAGCAGATTCTTTAATAAC
ATCACCAAGTTGCCCAGTAAGATGTAATTCACCATTTCCAATCATTGCTGTAGCCTCCACAAAC
TGAACCTCTCCTCCGAAATTGGTCCAAACAAGCCCAACAGATACTCCGGGAGTGGCAACACGAT
CTGCAGCTTCTCGGTCATCAAACCTAGGAGGCCCCAATATTTTTTCCAGCATAGCCTCATCAAC
AACTAAACGTGAGGAAATTTTGAATGCAGTTGATATCTCATTATTATTCACACCCATTGGAAGG
ACTTCCATTTCCATCTCAGCTCCCTCAGCAAGCCTGTTATCCAGCAGAGGAGAAGCTAGCTTAT
GAACATCTTTGCTAACTGAGACAGCCTGTTCTTGTTCAGCAACTCTTACAGCAGCAGCGCGAGC
CAAAGCAGCCAAGTTCCTTTCGAGATTCCGGACACCAGCTTCCCTGGTGTACCTCTGAATAACA
AGTTTAACCATGGCCTCCGGAATTTGAAGGTACTCAGAATTCAATCCATGCTGATCCAAAACTC
GTGGAATCAAATGTTGCATGGCTATTCTTAGCTTTTCTTCAGCGGTATATCCAGGCAGCTCAAT
GACTTCCATCCTGTCCAAGAGTGGAGGAGGAATAGGCTGCACCCTATTTGCAGTAGCCACAAAA
ATCACCTTTGAAAGGTCATATGGCACATTCAAATAGTGGTCGTTGAAAGATTTATTCTGCTCCG
GATCAAGAACCTCCAGTAGAGCTGAAGCTGGATCACCACGCACATCAGAACCTGTCTTGTCAAT
CTCGTCCAATAGCATGACTGGGTTGCAAACAGCTACTCT
						
					

						Genomic sequence
						
							CTCTAGGTTGGAAAGCACAGACGCAGGTACTTCAACTAAGTCCTTTAGATTTCTCTCTGGTAGA
ATAACTCTCTTGATACCATGACGGTGTGCTGCTAGTATCTGCACAATTGATATTCGGGGAAAAA
ATGTTGAAAAGAATGAGAAATAAAAGCAGTTTCAGTCAATCTTTTTGTTATTGCATATTCTTTG
ACGAGAAAAGATTTTGATCAAACATAAGCAAATATTATTATCGATGATGAACATATTATTCTCT
TGCTATATATATACACAGTAGCTCATGAAATAAAACACACCTTATCCTTAATACCACCGACAGG
TAACACAAGACCTCTCAGTGTCATTTCTCCAGTCATTGCGGTATCTGCTCTTACACATTTCTGA
CTAAACAAAGAAACCAGTGCCGTTACAAGCGTCACACCGGCTGATGGCCCATCCTTTGGTACAG
CCCCAGCTGGAAAATGTATATGAATATCTCTACCCTGCAGCACATTTTTTTCCTCTGCAGGTGC
CAACTTAAGATCTGCTGCCCTGGCTCTCACCTGAAAAATAGGAAACACTTTAAAATAAAACCCT
TAAAAGAATACAGAGTTATTTGAGTTTGACAATTATACCAAGAAAGGTGCAATGGCAACCACAC
AAGAAATAAAAGCATAATTAACAACAAAGAAGCAGAATAACTGACGAGAGTAATATCAACGAGC
AACTTGTATATGAGGTCTGTTTACAGAATCAACAAAAGTAGACAGGAAGTGCTCTATTGCAACT
TTTAGATCAATCAGGAGGTGTTGAAGGATAAGGTAGTAATTTTTAGAAAACATGCATGATCCTG
ATCCAATAAATAATATGCCCACACCAGCTACAGTTTACGTAGCAACTTTTAAATCACCAGCAGC
ATTCATGGTGATGGATTTTGAATCAGACAAATGTAGAAAATGTGATCCAAGAACGCATACCCAT
GTCAATGCTATTTTAGCAGATTCTTTAATAACATCACCAAGTTGCCCAGTAAGATGTAATTCAC
CATTTCCAATCATTGCTGTAGCCTCCACAAACTGAACCTCTCCTCCGAAATTGGTCCAAACAAG
CCCAACAGATACTCCGGGAGTGGCAACACGATCTGCAGCTTCTCGGTCATCAAACCTAGGAGGC
TGCATTAGAGAGTACAAGCACCTCATTCGTATTAAGAAAGAATGTGAACTCAACCTACTGTCAG
CATAAACTTACTCAAGCCTATGGACCACATCATACATGGAGAGTTTATGCCTAAAGTGACCGGA
AAAGAAAAACTGAAAACCAAAAATATTTTTTTCACCACATTTAAATGGACCCAATTCTAAAGGT
TTTAAAAAGTGAATATCCAGATAAAAGAAAAGAGTTTGTGAGGAATTATTACCCCCAATATTTT
TTCCAGCATAGCCTCATCAACAACTAAACGTGAGGAAATTTTGAATGCAGTTGATATCTCATTA
TTATTCACACCCATTGGAAGGACTTCCATTTCCATCTCAGCTCCCTCAGCAAGCCTGTTATCCA
GCAGAGGAGAAGCTAGCTTATGAACATCTTTGCTAACTGAGACAGCCTGTTCTTGTTCAGCAAC
TCTTACAGCAGCAGCGCGAGCCAAAGCAGCCAAGTTCCTTTCGAGATTCCGGACACCAGCTTCC
CTGGTGTACCTCTGAATAACAAGTTTAACCATGGCCTACCACAATAAAAGGCATTAAGATAAGA
TTACTTAATATAACTTGGTGGAACTGGAATGCAAAGAAATAAATAAAATGTGCTGTACGATACA
ATATAACTCGATGCTTATATTAGCTTATTTTATCTTGATCTTACTGACATCTTAATCTAAATTT
TAAGTAGAAGAGTTGAAGAAATAGATGCCTCTATGTTCTATTAAATTTTGAAAATGAAAGAGCT
CAGACATCTTCCACGGATATAATCAACAAATATTACAAAGTAACCTTAGCCTTCAAAATGAGAT
GGAAAAGACCTCCATACTTGATATTAGTCCTAAATCCTAATAATCATTTATTCAACTGAGATAA
TAGGGAAGCAAAGACCAGCTCACAGGTTTCTAAAAATTATCTCCATGCTCAAGGGTAGTCATAA
CAACAGGTGTTAATGAACTTAAGACACCCAATATTATCAAGTATGGAAGCACGCGCCTCAAAAA
GACAAGATTGAATTGTGATAAATACCTCCGGAATTTGAAGGTACTCAGAATTCAATCCATGCTG
ATCCAAAACTCGTGGAATCAAATGTTGCATGGCTATTCTTAGCTTTTCTTCAGCGGTATATCCA
GGCAGCTCAATGACTTCCATCCTGTCCAAGAGTGGAGGAGGAATAGGCTGCACCCTATTTGCAG
TAGCCACAAAAATCACCTTTGAAAGGTCATATGGCACATTCAAATAGCTATTCAACCTCAGTTA
AAGATCACGAAAGACCAACTCACACATGAAATGGGTTTAGTGATGGAGACGCAAATACCCACGT
AGAATCAATAACAATGTCATATATACAATTCAAAAAAGGGTCAAAGAATAAATGTTAAATAAAG
TCCACAAGTTAAACAGCAACGCAAATTTTCAAGGATTTACTAATAAAGATCAATAAATTTACTG
CTGGTTTCCAAGCCAAACTTCACCATGATAATCTAGACATAGAAGAAAGTAGGATACTGGTCGT
TGAAAGATTTATTCTGCTCCGGATCAAGAACCTCCAGTAGAGCTGAAGCTGGATCACCACGCAC
ATCAGAACCTGTCTTGTCAATCTCGTCCAATAGCATGACTGGGTTGCAAACAGCTACTCT
						
					

			
		

Sequences
Splice junction sequence	CAAGAACCTCCAGTAGAGCTGAAGCTGGATCACCACGCACATCAGAACCTGTCTTGTCAATCTC GTCCAATAGCATGACTGGGTTGCAAACAGCTACTCTctctaggttggaaagcacagacgcaggt acttcaactaagtcctttagatttctctctggtagaataactctcttgataccatgacggtgtg ctgctagt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1191 Transcript exons: 50580726-50580827,50581022-50581267,50581682-50581876,50 582122-50582424,50582927-50583140,50583407-50583537 CTCTAGGTTGGAAAGCACAGACGCAGGTACTTCAACTAAGTCCTTTAGATTTCTCTCTGGTAGA ATAACTCTCTTGATACCATGACGGTGTGCTGCTAGTATCTTATCCTTAATACCACCGACAGGTA ACACAAGACCTCTCAGTGTCATTTCTCCAGTCATTGCGGTATCTGCTCTTACACATTTCTGACT AAACAAAGAAACCAGTGCCGTTACAAGCGTCACACCGGCTGATGGCCCATCCTTTGGTACAGCC CCAGCTGGAAAATGTATATGAATATCTCTACCCTGCAGCACATTTTTTTCCTCTGCAGGTGCCA ACTTAAGATCTGCTGCCCTGGCTCTCACCCATGTCAATGCTATTTTAGCAGATTCTTTAATAAC ATCACCAAGTTGCCCAGTAAGATGTAATTCACCATTTCCAATCATTGCTGTAGCCTCCACAAAC TGAACCTCTCCTCCGAAATTGGTCCAAACAAGCCCAACAGATACTCCGGGAGTGGCAACACGAT CTGCAGCTTCTCGGTCATCAAACCTAGGAGGCCCCAATATTTTTTCCAGCATAGCCTCATCAAC AACTAAACGTGAGGAAATTTTGAATGCAGTTGATATCTCATTATTATTCACACCCATTGGAAGG ACTTCCATTTCCATCTCAGCTCCCTCAGCAAGCCTGTTATCCAGCAGAGGAGAAGCTAGCTTAT GAACATCTTTGCTAACTGAGACAGCCTGTTCTTGTTCAGCAACTCTTACAGCAGCAGCGCGAGC CAAAGCAGCCAAGTTCCTTTCGAGATTCCGGACACCAGCTTCCCTGGTGTACCTCTGAATAACA AGTTTAACCATGGCCTCCGGAATTTGAAGGTACTCAGAATTCAATCCATGCTGATCCAAAACTC GTGGAATCAAATGTTGCATGGCTATTCTTAGCTTTTCTTCAGCGGTATATCCAGGCAGCTCAAT GACTTCCATCCTGTCCAAGAGTGGAGGAGGAATAGGCTGCACCCTATTTGCAGTAGCCACAAAA ATCACCTTTGAAAGGTCATATGGCACATTCAAATAGTGGTCGTTGAAAGATTTATTCTGCTCCG GATCAAGAACCTCCAGTAGAGCTGAAGCTGGATCACCACGCACATCAGAACCTGTCTTGTCAAT CTCGTCCAATAGCATGACTGGGTTGCAAACAGCTACTCT
Genomic sequence	CTCTAGGTTGGAAAGCACAGACGCAGGTACTTCAACTAAGTCCTTTAGATTTCTCTCTGGTAGA ATAACTCTCTTGATACCATGACGGTGTGCTGCTAGTATCTGCACAATTGATATTCGGGGAAAAA ATGTTGAAAAGAATGAGAAATAAAAGCAGTTTCAGTCAATCTTTTTGTTATTGCATATTCTTTG ACGAGAAAAGATTTTGATCAAACATAAGCAAATATTATTATCGATGATGAACATATTATTCTCT TGCTATATATATACACAGTAGCTCATGAAATAAAACACACCTTATCCTTAATACCACCGACAGG TAACACAAGACCTCTCAGTGTCATTTCTCCAGTCATTGCGGTATCTGCTCTTACACATTTCTGA CTAAACAAAGAAACCAGTGCCGTTACAAGCGTCACACCGGCTGATGGCCCATCCTTTGGTACAG CCCCAGCTGGAAAATGTATATGAATATCTCTACCCTGCAGCACATTTTTTTCCTCTGCAGGTGC CAACTTAAGATCTGCTGCCCTGGCTCTCACCTGAAAAATAGGAAACACTTTAAAATAAAACCCT TAAAAGAATACAGAGTTATTTGAGTTTGACAATTATACCAAGAAAGGTGCAATGGCAACCACAC AAGAAATAAAAGCATAATTAACAACAAAGAAGCAGAATAACTGACGAGAGTAATATCAACGAGC AACTTGTATATGAGGTCTGTTTACAGAATCAACAAAAGTAGACAGGAAGTGCTCTATTGCAACT TTTAGATCAATCAGGAGGTGTTGAAGGATAAGGTAGTAATTTTTAGAAAACATGCATGATCCTG ATCCAATAAATAATATGCCCACACCAGCTACAGTTTACGTAGCAACTTTTAAATCACCAGCAGC ATTCATGGTGATGGATTTTGAATCAGACAAATGTAGAAAATGTGATCCAAGAACGCATACCCAT GTCAATGCTATTTTAGCAGATTCTTTAATAACATCACCAAGTTGCCCAGTAAGATGTAATTCAC CATTTCCAATCATTGCTGTAGCCTCCACAAACTGAACCTCTCCTCCGAAATTGGTCCAAACAAG CCCAACAGATACTCCGGGAGTGGCAACACGATCTGCAGCTTCTCGGTCATCAAACCTAGGAGGC TGCATTAGAGAGTACAAGCACCTCATTCGTATTAAGAAAGAATGTGAACTCAACCTACTGTCAG CATAAACTTACTCAAGCCTATGGACCACATCATACATGGAGAGTTTATGCCTAAAGTGACCGGA AAAGAAAAACTGAAAACCAAAAATATTTTTTTCACCACATTTAAATGGACCCAATTCTAAAGGT TTTAAAAAGTGAATATCCAGATAAAAGAAAAGAGTTTGTGAGGAATTATTACCCCCAATATTTT TTCCAGCATAGCCTCATCAACAACTAAACGTGAGGAAATTTTGAATGCAGTTGATATCTCATTA TTATTCACACCCATTGGAAGGACTTCCATTTCCATCTCAGCTCCCTCAGCAAGCCTGTTATCCA GCAGAGGAGAAGCTAGCTTATGAACATCTTTGCTAACTGAGACAGCCTGTTCTTGTTCAGCAAC TCTTACAGCAGCAGCGCGAGCCAAAGCAGCCAAGTTCCTTTCGAGATTCCGGACACCAGCTTCC CTGGTGTACCTCTGAATAACAAGTTTAACCATGGCCTACCACAATAAAAGGCATTAAGATAAGA TTACTTAATATAACTTGGTGGAACTGGAATGCAAAGAAATAAATAAAATGTGCTGTACGATACA ATATAACTCGATGCTTATATTAGCTTATTTTATCTTGATCTTACTGACATCTTAATCTAAATTT TAAGTAGAAGAGTTGAAGAAATAGATGCCTCTATGTTCTATTAAATTTTGAAAATGAAAGAGCT CAGACATCTTCCACGGATATAATCAACAAATATTACAAAGTAACCTTAGCCTTCAAAATGAGAT GGAAAAGACCTCCATACTTGATATTAGTCCTAAATCCTAATAATCATTTATTCAACTGAGATAA TAGGGAAGCAAAGACCAGCTCACAGGTTTCTAAAAATTATCTCCATGCTCAAGGGTAGTCATAA CAACAGGTGTTAATGAACTTAAGACACCCAATATTATCAAGTATGGAAGCACGCGCCTCAAAAA GACAAGATTGAATTGTGATAAATACCTCCGGAATTTGAAGGTACTCAGAATTCAATCCATGCTG ATCCAAAACTCGTGGAATCAAATGTTGCATGGCTATTCTTAGCTTTTCTTCAGCGGTATATCCA GGCAGCTCAATGACTTCCATCCTGTCCAAGAGTGGAGGAGGAATAGGCTGCACCCTATTTGCAG TAGCCACAAAAATCACCTTTGAAAGGTCATATGGCACATTCAAATAGCTATTCAACCTCAGTTA AAGATCACGAAAGACCAACTCACACATGAAATGGGTTTAGTGATGGAGACGCAAATACCCACGT AGAATCAATAACAATGTCATATATACAATTCAAAAAAGGGTCAAAGAATAAATGTTAAATAAAG TCCACAAGTTAAACAGCAACGCAAATTTTCAAGGATTTACTAATAAAGATCAATAAATTTACTG CTGGTTTCCAAGCCAAACTTCACCATGATAATCTAGACATAGAAGAAAGTAGGATACTGGTCGT TGAAAGATTTATTCTGCTCCGGATCAAGAACCTCCAGTAGAGCTGAAGCTGGATCACCACGCAC ATCAGAACCTGTCTTGTCAATCTCGTCCAATAGCATGACTGGGTTGCAAACAGCTACTCT

			
						 Conservation Information
					
						Conserved circRNAs
						
							gar_circ_000536* 						
					
						PMCS
						0.444085962

Conservation Information
Conserved circRNAs	gar_circ_000536*
PMCS	0.444085962

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							50583514-50580728(-)
50583512-50580807(+)
						
					

						Potential amino acid sequence
						
							MLLDEIDKTGSDVRGDPASALLEVLDPEQNKSFNDHYLNVPYDLSKVIFVATANRVQPIPPPLL
DRMEVIELPGYTAEEKLRIAMQHLIPRVLDQHGLNSEYLQIPEAMVKLVIQRYTREAGVRNLER
NLAALARAAAVRVAEQEQAVSVSKDVHKLASPLLDNRLAEGAEMEMEVLPMGVNNNEISTAFKI
SSRLVVDEAMLEKILGPPRFDDREAADRVATPGVSVGLVWTNFGGEVQFVEATAMIGNGELHLT
GQLGDVIKESAKIALTWVRARAADLKLAPAEEKNVLQGRDIHIHFPAGAVPKDGPSAGVTLVTA
LVSLFSQKCVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRHGIKRVILPERNLKDLVEVPASV
LSNLERVAVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKSFNDHYLNVPYDLSKVIFVA
TANRVQPIPPPLLDRMEVIELPGYTAEEKLRIAMQHLIPRVLDQHGLNSEYLQIPEAMVKLVIQ
RYTREAGVRNLERNLAALARAAAVRVAEQEQAVSVSKDVHKLASPLLDNRLAEGAEMEMEVLPM
GVNNNEISTAFKISSRLVVDEAMLEKILGPPRFDDREAADRVATPGVSVGLVWTNFGGEVQFVE
ATAMIGNGELHLTGQLGDVIKESAKIALTWVRARAADLKLAPAEEKNVLQGRDIHIHFPAGAVP
KDGPSAGVTLVTALVSLFSQKCVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRHGIKRVILPE
RNLKDLVEVPASVLSNLERVAVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKSFNDHYL
NVPYDLSKVIFVATANRVQPIPPPLLDRMEVIELPGYTAEEKLRIAMQHLIPRVLDQHGLNSEY
LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVRVAEQEQAVSVSKDVHKLASPLLDNRL
AEGAEMEMEVLPMGVNNNEISTAFKISSRLVVDEAMLEKILGPPRFDDREAADRVATPGVSVGL
VWTNFGGEVQFVEATAMIGNGELHLTGQLGDVIKESAKIALTWVRARAADLKLAPAEEKNVLQG
RDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSQKCVRADTAMTGEMTLRGLVLPVGGIKDKILA
AHRHGIKRVILPERNLKDLVEVPASVLSNLERVAVCNPVMLLDEIDKTGSDVRGDPASALLEVL
DPEQNKSFNDHYLNVPYDLSKVIFVATANRVQPIPPPLLDRMEVIELPGYTAEEKLRIAMQHLI
PRVLDQHGLNSEYLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVRVAEQEQAVSVSKD
VHKLASPLLDNRLAEGAEMEMEVLPMGVNNNEISTAFKISSRLVVDEAMLEKILGPPRFDDREA
ADRVATPGVSVGLVWTNFGGEVQFVEATAMIGNGELHLTGQLGDVIKESAKIALTWVRARAADL
KLAPAEEKNVLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSQKCVRADTAMTGEMTLRGL
VLPVGGIKDKILAAHRHGIKRVILPERNLKDLVEVPASVLSNLE(-)
MTGLQTATLSRLESTDAGTSTKSFRFLSGRITLLIP*(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	50583514-50580728(-) 50583512-50580807(+)
Potential amino acid sequence	MLLDEIDKTGSDVRGDPASALLEVLDPEQNKSFNDHYLNVPYDLSKVIFVATANRVQPIPPPLL DRMEVIELPGYTAEEKLRIAMQHLIPRVLDQHGLNSEYLQIPEAMVKLVIQRYTREAGVRNLER NLAALARAAAVRVAEQEQAVSVSKDVHKLASPLLDNRLAEGAEMEMEVLPMGVNNNEISTAFKI SSRLVVDEAMLEKILGPPRFDDREAADRVATPGVSVGLVWTNFGGEVQFVEATAMIGNGELHLT GQLGDVIKESAKIALTWVRARAADLKLAPAEEKNVLQGRDIHIHFPAGAVPKDGPSAGVTLVTA LVSLFSQKCVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRHGIKRVILPERNLKDLVEVPASV LSNLERVAVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKSFNDHYLNVPYDLSKVIFVA TANRVQPIPPPLLDRMEVIELPGYTAEEKLRIAMQHLIPRVLDQHGLNSEYLQIPEAMVKLVIQ RYTREAGVRNLERNLAALARAAAVRVAEQEQAVSVSKDVHKLASPLLDNRLAEGAEMEMEVLPM GVNNNEISTAFKISSRLVVDEAMLEKILGPPRFDDREAADRVATPGVSVGLVWTNFGGEVQFVE ATAMIGNGELHLTGQLGDVIKESAKIALTWVRARAADLKLAPAEEKNVLQGRDIHIHFPAGAVP KDGPSAGVTLVTALVSLFSQKCVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRHGIKRVILPE RNLKDLVEVPASVLSNLERVAVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKSFNDHYL NVPYDLSKVIFVATANRVQPIPPPLLDRMEVIELPGYTAEEKLRIAMQHLIPRVLDQHGLNSEY LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVRVAEQEQAVSVSKDVHKLASPLLDNRL AEGAEMEMEVLPMGVNNNEISTAFKISSRLVVDEAMLEKILGPPRFDDREAADRVATPGVSVGL VWTNFGGEVQFVEATAMIGNGELHLTGQLGDVIKESAKIALTWVRARAADLKLAPAEEKNVLQG RDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSQKCVRADTAMTGEMTLRGLVLPVGGIKDKILA AHRHGIKRVILPERNLKDLVEVPASVLSNLERVAVCNPVMLLDEIDKTGSDVRGDPASALLEVL DPEQNKSFNDHYLNVPYDLSKVIFVATANRVQPIPPPLLDRMEVIELPGYTAEEKLRIAMQHLI PRVLDQHGLNSEYLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVRVAEQEQAVSVSKD VHKLASPLLDNRLAEGAEMEMEVLPMGVNNNEISTAFKISSRLVVDEAMLEKILGPPRFDDREA ADRVATPGVSVGLVWTNFGGEVQFVEATAMIGNGELHLTGQLGDVIKESAKIALTWVRARAADL KLAPAEEKNVLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSQKCVRADTAMTGEMTLRGL VLPVGGIKDKILAAHRHGIKRVILPERNLKDLVEVPASVLSNLE(-) MTGLQTATLSRLESTDAGTSTKSFRFLSGRITLLIP*(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhao et al., 2017b

circRNA

Detail information of orai.004G190200_circ_g.1

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