Detail information of BGIOSGA033156_circ_g.1


General Information
CircRNA Name BGIOSGA033156_circ_g.1
ID in PlantcircBase osi_circ_008536
Alias Chr10:20649428_20651499(ZS97RS2)
Organism Oryza sativa ssp. indica
Position chr10: 17228028-17230099  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   ie-circRNA
Identification method CIRCexplorer2
Parent gene BGIOSGA033156
Parent gene annotation NA
Parent gene strand +
Alternative splicing NA
Support reads NA
Tissues root, leaf, panicle
Exon boundary   No-No
Splicing signals   GT-CA
Number of exons covered BGIOSGA033156-TA:2
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   TTGTTTTTCAATTTCTTACTTGACTGGAGGGAGTACATCAAAAGATGCTCTGAGTCCAGCAGTT
CAGAGATTTACTTTGGATTTGTTCCGAGCTGGAAAGgatatacatcgtagaagatcgaaatgag
cttgagagcttttcccctcctgcaacaattgtgaacaaatactatgatgcttacatggttgatt
ttgataat
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GATATACATCGTAGAAGATCGAAATGAGCTTGAGAGCTTTTCCCCTCCTGCAACAATTGTGAAC
AAATACTATGATGCTTACATGGTTGATTTTGATAATCTGAAATCAAAGCTTCAGATATTGTCTG
ATGAGGTGATTTAACTGAAATACATTTGAGCTTATTATTAAAATACATATATAATTTGGAGTAC
CAAAACCTACAGCTCCCTGTAACTTTCTTTTTGCATGTATATTTGTTTAAATTTTGTACTGTTG
GGCAGTTTGATTCTTTGTTGGTTGGTCTTCAAGAATCGCCATCTAATAAATTTAAAGACACCGA
TAATATCCTAGAGACTTCAAGAAAGAGCTTGTCCAGATACCATGGGAAAATATTGTACAGCCTA
AACGATCTTGGTCCAATTATCACCTCTGAGGTATTGCATTATCCAATCAGTATTATATAATCAG
TTCTATGTAAAGAAAACTTTTCTGAAGAGTCACATAACTTTGACATTTCATATCGGCCTTGTTT
GTTTACTAGTTATACCTACATAAATTCCAGTCTTATTGAAATGATTTTTAACCTTTTTGCAAAT
ATATAAAATATTGCGCATGCCGAACTGATAAATCAAAAGAATATTTGGTGAATTCTTTTCATAG
GAACCATTCACTTTAACTAGTAAAGATTGGCACAAGTTCAAGTACCTAAGAACATAAGCTGCTT
TGCATGACCTTGCCTGTGACAGCTATAGTATCTTTGCCATTATTTTTCCGTAACATCACGTGTG
CTGCAACTGTTTGTCTTCTGTTATGAAAGAGTGCTTTGTTCTTTTCTGGAAGTGGAAACGGTGT
ATTGGTACTAAAAAACCTGTTATCCATAAGGACTTCAAGTATAGTGTAAAATGCTTATACTAAC
TTAAATTGTTTTCTTAACAGGTAGTCAAAATACATATTGAAAGCGTTAAGCCATTATGTGATTC
TGAAGACTGCATTTTTTCTAAAGCTAGCTTGTGCTTACATATGTCTTATTTTAAAGAAGCTTTA
AGTCTAATAGAGGAAATTCTTCCACAAGGTATAGTGCACCCTTTAGTTGTTATCTTGAATTAAC
TGCATAAGCAAAAATGATGCAGTGAGTATCTTTCTTTTATCTGTATGGATTAGGTAATGACACA
ATTTGCAAATCCAACTAGGATTGCATTATGTTCTTTCTGTTTAGCTTATGCCCTCCAGTAAAAG
ATTCCCTGAATCTTTTAGTTTAGTTGTCTGTTTTTTGTACGTTATTCTCAGAATAAGAAGAGAA
ACACATGCTTCTACACACCCTCCTAATTTGCATGCTCTATAGAAGTGAACTATGAAGTTGATGT
AGTTCGCTGGGTGCTGATAGCTAATTTGTGGAGTTGGCTGCTAGCTGAGAGGGCTATCACCTTT
GACGTTAATCTTTGCCCCTTATGATAAGATCTGGTCAGCGGGCTTCTGCCGGTTTGGCAAAAAA
GAAGTGAGCTTTGAAGCAGTTTCCAGTAGGTAGTTAGAAGCACTCAACCAAAAAGACAGAGGAG
ATTGACTCTAACCTCTATAGCCACTTAGATTGCAGTTGGTAGTCTCTGTGCCACAGCTATTGTT
TCTCTGTATGTGTTCCTTTTTCTACTTTCGTGCATTGATAGTTGCCTTCTCTAATTCTGCTGAT
GCAATTGCATGACAGGATATGGTGAACTAATGAAATCAGAATCTGGTTCTGAGGAATTAACTAA
AAGGGGATACATTTCTTCAAAAGTGAATACGCTAATCAACATCTTCAAATCGTTTGGGTAATAC
CCTAGTATTCTACTCAAGATGTTTAGTTTCACCTACTTTTGGTCTTTTGTTGGCCAAAAATAAT
ACAGCCATGTGTTTTCTCTACAGGTCATCAAATGAAGTGCTTTGCCTAATTTTCGTAGACAGAA
TTATGACAGCTAAAGCCGTCGAAAGGTTTATGAGAGGAATTGTTAACTTCTCTTGTTTTTCAAT
TTCTTACTTGACTGGAGGGAGTACATCAAAAGATGCTCTGAGTCCAGCAGTTCAGAGATTTACT
TTGGATTTGTTCCGAGCTGGAAAG
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021