Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d045042_circ_g.3 |
ID in PlantcircBase | zma_circ_009845 |
Alias | Zm09circ00009 |
Organism | Zea mays |
Position | chr9: 10912449-10912844 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | CIRI2 |
Parent gene | Zm00001d045042 |
Parent gene annotation |
Sucrose synthase 1 |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf, endosperm |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d045042_T013:2 Zm00001d045042_T011:2 Zm00001d045042_T016:2 Zm00001d045042_T006:2 Zm00001d045042_T005:2 Zm00001d045042_T003:2 Zm00001d045042_T012:2 Zm00001d045042_T014:2 Zm00001d045042_T008:2 Zm00001d045042_T002:2 Zm00001d045042_T015:2 Zm00001d045042_T004:2 Zm00001d045042_T010:2 Zm00001d045042_T017:2 Zm00001d045042_T018:2 Zm00001d045042_T007:2 Zm00001d045042_T001:2 Zm00001d045042_T019:2 Zm00001d045042_T020:2 Zm00001d045042_T021:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.157827231 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Han et al., 2020 |