Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d026127_circ_igg.5 |
ID in PlantcircBase | zma_circ_003239 |
Alias | circ1533 |
Organism | Zea mays |
Position | chr10: 139204632-139205134 JBrowse» |
Reference genome | AGPv4.38 |
Type | igg-circRNA |
Identification method | CIRCexplor2 |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | Zm00001d026127_circ_g.2 Zm00001d026127_circ_igg.1 Zm00001d026127_circ_ag.1 Zm00001d026127_circ_ag.2 Zm00001d026127_circ_igg.3 Zm00001d026127_circ_igg.4 Zm00001d026127_circ_igg.6 |
Support reads | 136 |
Tissues | seedling leaves |
Exon boundary | No-No |
Splicing signals | GT-CA |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.149353761 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |