Plant Circular RNA Database

Detail information of AT3G14205_circ_g.3

			
						 General Information
					
						CircRNA Name
						AT3G14205_circ_g.3
					
						ID in PlantcircBase
						ath_circ_021661
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr3: 4716625-4719293  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer, PcircRNA_finder
					
						Parent gene
						
							AT3G14205						
					
						Parent gene annotation
						
							Phosphoinositide phosphatase SAC2
							
						Parent gene strand
						-
					
						Alternative splicing
						
							AT3G14205_circ_g.1 AT3G14205_circ_g.2 AT3G14205_circ_g.4 AT3G14205_circ_g.5 AT3G14205_circ_g.6 AT3G14205_circ_g.7 AT3G14205_circ_g.8 AT3G14205_circ_g.9 AT3G14205_circ_g.10 AT3G14205_circ_g.11 AT3G14205_circ_g.12 AT3G14205_circ_g.13 						
					
						Support reads
						2
					
						Tissues
						inflorescences
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT3G14205.2:10
AT3G14205.1:10

General Information
CircRNA Name	AT3G14205_circ_g.3
ID in PlantcircBase	ath_circ_021661
Alias	NA
Organism	Arabidpsis thaliana
Position	chr3: 4716625-4719293 JBrowse»
Reference genome	TAIR10.38
Type	ue-circRNA
Identification method	CIRCexplorer, PcircRNA_finder
Parent gene	AT3G14205
Parent gene annotation	Phosphoinositide phosphatase SAC2
Parent gene strand	-
Alternative splicing	AT3G14205_circ_g.1 AT3G14205_circ_g.2 AT3G14205_circ_g.4 AT3G14205_circ_g.5 AT3G14205_circ_g.6 AT3G14205_circ_g.7 AT3G14205_circ_g.8 AT3G14205_circ_g.9 AT3G14205_circ_g.10 AT3G14205_circ_g.11 AT3G14205_circ_g.12 AT3G14205_circ_g.13
Support reads	2
Tissues	inflorescences
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT3G14205.2:10 AT3G14205.1:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATTGTTAGACAGATTCCTCTGAAGTGTATGCATGATGTGATAGGAATAGCTGAAGAAGAAGTCC
TTTGTGAGATCAACAGTGCAGAGCAGCCTCTTGTACctcaaactagcagcaatcttggcagttt
cagacgttgagatctccggtgctgaatctgaaagacctttaacttcttcatctttttcagctaa
accatgtc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1626
Transcript exons: 4716625-4716801,4716899-4717012,4717093-4717214,4717308-
4717665,4717775-4717909,4718001-4718134,4718224-4718321,
4718416-4718603,4718708-4718784,4719071-4719293
CTCAAACTAGCAGCAATCTTGGCAGTTTCAGACGTTGAGATCTCCGGTGCTGAATCTGAAAGAC
CTTTAACTTCTTCATCTTTTTCAGCTAAACCATGTCTACCTACTGGTCCCAATGCGGCTGGACT
GCTCTCGCTAATGATGCTACTTTCTGATAGAGATCGTTTCATCGTCGATCTTGAAGTCTCTGGT
ACAGAATTGGCAAGAAATCTTGCTGCGTTGTAATGCTGATCAGAACCCAATTCCCATAGCGCTG
GCTTATCTGATTGTGGCTGAAAGTATCCCAAGAACACGTTAATTGCATCTTGCTTTTCGGCATC
CATATAGGCGTTACTGTAGTAACGTTGTAAAGTTCTGAAGAATTCCTGTGATTGAGTCGCTGCT
CTCCATTGACCACGCCTTTCACAAAATATCTTGTTGTGTGCCGCGGATCCTCCATACTGAAGTG
CAAGTGTATCTCCCATCGTCTCATAAATTCCCATCAAATCTTCAGCGAGGGGATTGTCTAGATC
AATATTAGTAGACTCTGTCAATCCCAAAGCATGGAGTTGACGCCCAAATGCTACCAACCCATAG
GCATATTGAGCAACATTGGTGCGATCTAAACAGTCTATGCAATTGGTCCTCAGGACTCCTTTCT
GCAGCATGGTAACTTCCTTTTGCTGATCTTCCTTAGCATCCTTACTATCATTACCGTTTTCCAC
CACCAAATTTGGTGCAGTTTCATCTTTACTGGGTGGATCATAAGTAGAACATTCACCATCGTCG
TTCTCCAAGGTGGATGGATTCTGGTTCTGAAATCCTTCTCCTCTAAGATCTGGAGTTAATTGAC
AGTAGAAGATGCTGGTCAAGTTCAGAGCATAAGTAGCCAACCTGCCGAGAATTGCCAACACGTT
TGTGCCTTTTTTTCTGGAGTGTTTATGCAAGTCCCAGTGAAGAGGCCTTAGACGATCCTCTTTG
CTTAACCCTTTATTAATAAATCTAATTGCATTTGCAAACTCTGCACGCAGAATAGTCTCCCGAG
GCCTCTTTTCACGCGTCTTTATCAAGTTCAGTATGATGATTGGATTCCCATATCTCCTTCCAAG
ATTTTCAAAATGCAGTCTGGTTGCCTCAAAGTTGGGGTCTTTCGGTGACAATATTATATCAGGT
TTGATATTCAAGCGTGAGGTCTCCTGAGACCAGAACAAAGGAATTGAACCCCGATTCTGAACTA
CAGAACTTATTCGGCCGGGATTACCATCTTGAGCTTCCTCGAAAACAATCTGCTCTGTCTCAAC
ATCATTAGCTACCCTGCCTTTCTCGTTTACACCACGTTTCAGATATCTTGTACCAGCATAATGC
CGAGATCTGCGAGAAATTAGAGTCAATCTAAAGTTCTTCTCAGAAACTGATAGTTTGACCTGTT
TGAAAAATCCATATACCAAGGCAACTGTCCACATACAGTCCTTCACGTTATTCCGAATCCTTCG
AGTTAAGTATTCGTTCCAGACAAACATCGATTCGTAGTAAGTGTGTCCTTCCACATTGTTAGAC
AGATTCCTCTGAAGTGTATGCATGATGTGATAGGAATAGCTGAAGAAGAAGTCCTTTGTGAGAT
CAACAGTGCAGAGCAGCCTCTTGTAC
						
					

						Genomic sequence
						
							CTCAAACTAGCAGCAATCTTGGCAGTTTCAGACGTTGAGATCTCCGGTGCTGAATCTGAAAGAC
CTTTAACTTCTTCATCTTTTTCAGCTAAACCATGTCTACCTACTGGTCCCAATGCGGCTGGACT
GCTCTCGCTAATGATGCTACTTTCTGATAGAGATCGTTTCATCGTCGATCTAAAGGCAATAAAA
TGGAATGTAAGCATCTCTAATGAAACATAGAATGTATCAAACTTCTCTACAAGTGTCTCATTAA
ACAGGAAAGAAAATATACCTTGAAGTCTCTGGTACAGAATTGGCAAGAAATCTTGCTGCGTTGT
AATGCTGATCAGAACCCAATTCCCATAGCGCTGGCTTATCTGATTGTGGCTGAAAGTATCCCAA
GAACCTGTAGAAAGATACAAATCAAAGTCATATAATTTTTCATACCATAGAAAAAGAAAACAGA
GAAAATTTAACCCAGCATACACGTTAATTGCATCTTGCTTTTCGGCATCCATATAGGCGTTACT
GTAGTAACGTTGTAAAGTTCTGAAGAATTCCTGTGATTGAGTCGCTGCTCTCCATTGACCACGC
CTTTCACAAAATATCTGGCCACATAAGTAAGATCATTGGTTAACAATTATGTCCTAAGATTTTT
ATCTAGCGAGACAAAAACTTATGGCCAGAGAAGTAAAAGAGACCTTGTTGTGTGCCGCGGATCC
TCCATACTGAAGTGCAAGTGTATCTCCCATCGTCTCATAAATTCCCATCAAATCTTCAGCGAGG
GGATTGTCTAGATCAATATTAGTAGACTCTGTCAATCCCAAAGCATGGAGTTGACGCCCAAATG
CTACCAACCCATAGGCATATTGAGCAACATTGGTGCGATCTAAACAGTCTATGCAATTGGTCCT
CAGGACTCCTTTCTGCAGCATGGTAACTTCCTTTTGCTGATCTTCCTTAGCATCCTTACTATCA
TTACCGTTTTCCACCACCAAATTTGGTGCAGTTTCATCTTTACTGGGTGGATCATAAGTAGAAC
ATTCACCATCGTCGTTCCTGCAATAATTACCGGAAGAATCAAATTGATCAGAGCCTAGCTTCTA
ACAATACAAGAGAGATGAATAATGTGCTAAGCAAGAAACCTATTGGTAAATAGAATACTCACTC
CAAGGTGGATGGATTCTGGTTCTGAAATCCTTCTCCTCTAAGATCTGGAGTTAATTGACAGTAG
AAGATGCTGGTCAAGTTCAGAGCATAAGTAGCCAACCTGCCGAGAATTGCCAACACGTTTGTGC
CTTTTCTGGAAAAGTAAAAACGCTAGTGTGTTAATAAAAAGATGCAATGAAAAGAAAAGAAACA
AAGAAACATATGAGGTTATCTCCATCACGTACTTTCTGGAGTGTTTATGCAAGTCCCAGTGAAG
AGGCCTTAGACGATCCTCTTTGCTTAACCCTTTATTAATAAATCTAATTGCATTTGCAAACTCT
GCACGCAGAATAGTCTCCCGAGGCCTCTTTTCACGCGTCTGTTTTTTCAATCAAGTGAATTAGG
ATTTAGCAGGACGATATATCAAAATTTGTATCCTCTAGATTACCGAGGAGTTAGAATACCAACC
TTTATCAAGTTCAGTATGATGATTGGATTCCCATATCTCCTTCCAAGATTTTCAAAATGCAGTC
TGGTTGCCTCAAAGTTGGGGTCTTTCGGTGACACTTTACACAGACAAGAGATATCAGCACAAAA
AAGCAAAGAAGAAGAAAAATGACATTGGTAAGAATATATTATGCTGAAGAAAGAAGATCATACA
TATTATATCAGGTTTGATATTCAAGCGTGAGGTCTCCTGAGACCAGAACAAAGGAATTGAACCC
CGATTCTGAACTACAGAACTTATTCGGCCGGGATTACCATCTTGAGCTTCCTCGAAAACAATCT
GCTCTGTCTCAACATCATTAGCTACCCTGCCTTTCTCGTTTACACCACGTTTCAGATATCTGGA
GGACAAGATAGAAGATTATGATCCAACTAAAACTTATCCCAGTACAGCTTAACTAAATGAATGG
CAGAGATAAAACAAGCTCAGGTGGAGAGATTGTACCTTGTACCAGCATAATGCCGAGATCTGCG
AGAAATTAGAGTCAATCTAAAGTTCTTCTCAGAAACTGATAGTTTGACCTATATATTGGACAAC
AAAAAAAACCATTATAAAGGTTAACAGATTTTAATGTGCGTAGAAAGAAAAAAGAATGGAGAAG
GCATCCACATAGTGGGGTTTGGGGTTCACTCCTAATTCTTATGAGAGCTTCTTCTCTCATGCTG
TACAAATTTTCAAAATCAAGCAACATGGACACGGAATTTTCAATGTGAGGTTAAAATATCTAAA
CACCTGTTTGTAATATGCATATCTCTGAATGTTAGATAAAATTAATAGAACCTTTGGACAAATT
AGTACAAGTGATACCTGTTTGAAAAATCCATATACCAAGGCAACTGTCCACATACAGTCCTTCA
CGTTATTCCGAATCCTTCGAGTTAAGTATTCGTTCCAGACAAACATCGATTCGTAGTAAGTGTG
TCCTTCCACATTGTTAGACAGATTCCTCTGAAGTGTATGCATGATGTGATAGGAATAGCTGAAG
AAGAAGTCCTTTGTGAGATCAACAGTGCAGAGCAGCCTCTTGTAC
						
					

			
		

Sequences
Splice junction sequence	ATTGTTAGACAGATTCCTCTGAAGTGTATGCATGATGTGATAGGAATAGCTGAAGAAGAAGTCC TTTGTGAGATCAACAGTGCAGAGCAGCCTCTTGTACctcaaactagcagcaatcttggcagttt cagacgttgagatctccggtgctgaatctgaaagacctttaacttcttcatctttttcagctaa accatgtc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1626 Transcript exons: 4716625-4716801,4716899-4717012,4717093-4717214,4717308- 4717665,4717775-4717909,4718001-4718134,4718224-4718321, 4718416-4718603,4718708-4718784,4719071-4719293 CTCAAACTAGCAGCAATCTTGGCAGTTTCAGACGTTGAGATCTCCGGTGCTGAATCTGAAAGAC CTTTAACTTCTTCATCTTTTTCAGCTAAACCATGTCTACCTACTGGTCCCAATGCGGCTGGACT GCTCTCGCTAATGATGCTACTTTCTGATAGAGATCGTTTCATCGTCGATCTTGAAGTCTCTGGT ACAGAATTGGCAAGAAATCTTGCTGCGTTGTAATGCTGATCAGAACCCAATTCCCATAGCGCTG GCTTATCTGATTGTGGCTGAAAGTATCCCAAGAACACGTTAATTGCATCTTGCTTTTCGGCATC CATATAGGCGTTACTGTAGTAACGTTGTAAAGTTCTGAAGAATTCCTGTGATTGAGTCGCTGCT CTCCATTGACCACGCCTTTCACAAAATATCTTGTTGTGTGCCGCGGATCCTCCATACTGAAGTG CAAGTGTATCTCCCATCGTCTCATAAATTCCCATCAAATCTTCAGCGAGGGGATTGTCTAGATC AATATTAGTAGACTCTGTCAATCCCAAAGCATGGAGTTGACGCCCAAATGCTACCAACCCATAG GCATATTGAGCAACATTGGTGCGATCTAAACAGTCTATGCAATTGGTCCTCAGGACTCCTTTCT GCAGCATGGTAACTTCCTTTTGCTGATCTTCCTTAGCATCCTTACTATCATTACCGTTTTCCAC CACCAAATTTGGTGCAGTTTCATCTTTACTGGGTGGATCATAAGTAGAACATTCACCATCGTCG TTCTCCAAGGTGGATGGATTCTGGTTCTGAAATCCTTCTCCTCTAAGATCTGGAGTTAATTGAC AGTAGAAGATGCTGGTCAAGTTCAGAGCATAAGTAGCCAACCTGCCGAGAATTGCCAACACGTT TGTGCCTTTTTTTCTGGAGTGTTTATGCAAGTCCCAGTGAAGAGGCCTTAGACGATCCTCTTTG CTTAACCCTTTATTAATAAATCTAATTGCATTTGCAAACTCTGCACGCAGAATAGTCTCCCGAG GCCTCTTTTCACGCGTCTTTATCAAGTTCAGTATGATGATTGGATTCCCATATCTCCTTCCAAG ATTTTCAAAATGCAGTCTGGTTGCCTCAAAGTTGGGGTCTTTCGGTGACAATATTATATCAGGT TTGATATTCAAGCGTGAGGTCTCCTGAGACCAGAACAAAGGAATTGAACCCCGATTCTGAACTA CAGAACTTATTCGGCCGGGATTACCATCTTGAGCTTCCTCGAAAACAATCTGCTCTGTCTCAAC ATCATTAGCTACCCTGCCTTTCTCGTTTACACCACGTTTCAGATATCTTGTACCAGCATAATGC CGAGATCTGCGAGAAATTAGAGTCAATCTAAAGTTCTTCTCAGAAACTGATAGTTTGACCTGTT TGAAAAATCCATATACCAAGGCAACTGTCCACATACAGTCCTTCACGTTATTCCGAATCCTTCG AGTTAAGTATTCGTTCCAGACAAACATCGATTCGTAGTAAGTGTGTCCTTCCACATTGTTAGAC AGATTCCTCTGAAGTGTATGCATGATGTGATAGGAATAGCTGAAGAAGAAGTCCTTTGTGAGAT CAACAGTGCAGAGCAGCCTCTTGTAC
Genomic sequence	CTCAAACTAGCAGCAATCTTGGCAGTTTCAGACGTTGAGATCTCCGGTGCTGAATCTGAAAGAC CTTTAACTTCTTCATCTTTTTCAGCTAAACCATGTCTACCTACTGGTCCCAATGCGGCTGGACT GCTCTCGCTAATGATGCTACTTTCTGATAGAGATCGTTTCATCGTCGATCTAAAGGCAATAAAA TGGAATGTAAGCATCTCTAATGAAACATAGAATGTATCAAACTTCTCTACAAGTGTCTCATTAA ACAGGAAAGAAAATATACCTTGAAGTCTCTGGTACAGAATTGGCAAGAAATCTTGCTGCGTTGT AATGCTGATCAGAACCCAATTCCCATAGCGCTGGCTTATCTGATTGTGGCTGAAAGTATCCCAA GAACCTGTAGAAAGATACAAATCAAAGTCATATAATTTTTCATACCATAGAAAAAGAAAACAGA GAAAATTTAACCCAGCATACACGTTAATTGCATCTTGCTTTTCGGCATCCATATAGGCGTTACT GTAGTAACGTTGTAAAGTTCTGAAGAATTCCTGTGATTGAGTCGCTGCTCTCCATTGACCACGC CTTTCACAAAATATCTGGCCACATAAGTAAGATCATTGGTTAACAATTATGTCCTAAGATTTTT ATCTAGCGAGACAAAAACTTATGGCCAGAGAAGTAAAAGAGACCTTGTTGTGTGCCGCGGATCC TCCATACTGAAGTGCAAGTGTATCTCCCATCGTCTCATAAATTCCCATCAAATCTTCAGCGAGG GGATTGTCTAGATCAATATTAGTAGACTCTGTCAATCCCAAAGCATGGAGTTGACGCCCAAATG CTACCAACCCATAGGCATATTGAGCAACATTGGTGCGATCTAAACAGTCTATGCAATTGGTCCT CAGGACTCCTTTCTGCAGCATGGTAACTTCCTTTTGCTGATCTTCCTTAGCATCCTTACTATCA TTACCGTTTTCCACCACCAAATTTGGTGCAGTTTCATCTTTACTGGGTGGATCATAAGTAGAAC ATTCACCATCGTCGTTCCTGCAATAATTACCGGAAGAATCAAATTGATCAGAGCCTAGCTTCTA ACAATACAAGAGAGATGAATAATGTGCTAAGCAAGAAACCTATTGGTAAATAGAATACTCACTC CAAGGTGGATGGATTCTGGTTCTGAAATCCTTCTCCTCTAAGATCTGGAGTTAATTGACAGTAG AAGATGCTGGTCAAGTTCAGAGCATAAGTAGCCAACCTGCCGAGAATTGCCAACACGTTTGTGC CTTTTCTGGAAAAGTAAAAACGCTAGTGTGTTAATAAAAAGATGCAATGAAAAGAAAAGAAACA AAGAAACATATGAGGTTATCTCCATCACGTACTTTCTGGAGTGTTTATGCAAGTCCCAGTGAAG AGGCCTTAGACGATCCTCTTTGCTTAACCCTTTATTAATAAATCTAATTGCATTTGCAAACTCT GCACGCAGAATAGTCTCCCGAGGCCTCTTTTCACGCGTCTGTTTTTTCAATCAAGTGAATTAGG ATTTAGCAGGACGATATATCAAAATTTGTATCCTCTAGATTACCGAGGAGTTAGAATACCAACC TTTATCAAGTTCAGTATGATGATTGGATTCCCATATCTCCTTCCAAGATTTTCAAAATGCAGTC TGGTTGCCTCAAAGTTGGGGTCTTTCGGTGACACTTTACACAGACAAGAGATATCAGCACAAAA AAGCAAAGAAGAAGAAAAATGACATTGGTAAGAATATATTATGCTGAAGAAAGAAGATCATACA TATTATATCAGGTTTGATATTCAAGCGTGAGGTCTCCTGAGACCAGAACAAAGGAATTGAACCC CGATTCTGAACTACAGAACTTATTCGGCCGGGATTACCATCTTGAGCTTCCTCGAAAACAATCT GCTCTGTCTCAACATCATTAGCTACCCTGCCTTTCTCGTTTACACCACGTTTCAGATATCTGGA GGACAAGATAGAAGATTATGATCCAACTAAAACTTATCCCAGTACAGCTTAACTAAATGAATGG CAGAGATAAAACAAGCTCAGGTGGAGAGATTGTACCTTGTACCAGCATAATGCCGAGATCTGCG AGAAATTAGAGTCAATCTAAAGTTCTTCTCAGAAACTGATAGTTTGACCTATATATTGGACAAC AAAAAAAACCATTATAAAGGTTAACAGATTTTAATGTGCGTAGAAAGAAAAAAGAATGGAGAAG GCATCCACATAGTGGGGTTTGGGGTTCACTCCTAATTCTTATGAGAGCTTCTTCTCTCATGCTG TACAAATTTTCAAAATCAAGCAACATGGACACGGAATTTTCAATGTGAGGTTAAAATATCTAAA CACCTGTTTGTAATATGCATATCTCTGAATGTTAGATAAAATTAATAGAACCTTTGGACAAATT AGTACAAGTGATACCTGTTTGAAAAATCCATATACCAAGGCAACTGTCCACATACAGTCCTTCA CGTTATTCCGAATCCTTCGAGTTAAGTATTCGTTCCAGACAAACATCGATTCGTAGTAAGTGTG TCCTTCCACATTGTTAGACAGATTCCTCTGAAGTGTATGCATGATGTGATAGGAATAGCTGAAG AAGAAGTCCTTTGTGAGATCAACAGTGCAGAGCAGCCTCTTGTAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.256184296

Conservation Information
Conserved circRNAs	NA
PMCS	0.256184296

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							4719227-4716627(-)
						
					

						Potential amino acid sequence
						
							MHTLQRNLSNNVEGHTYYESMFVWNEYLTRRIRNNVKDCMWTVALVYGFFKQVKLSVSEKNFRL
TLISRRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFEEAQDGNPGRISSVVQNRGSIPLFWSQ
ETSRLNIKPDIILSPKDPNFEATRLHFENLGRRYGNPIIILNLIKTREKRPRETILRAEFANAI
RFINKGLSKEDRLRPLHWDLHKHSRKKGTNVLAILGRLATYALNLTSIFYCQLTPDLRGEGFQN
QNPSTLENDDGECSTYDPPSKDETAPNLVVENGNDSKDAKEDQQKEVTMLQKGVLRTNCIDCLD
RTNVAQYAYGLVAFGRQLHALGLTESTNIDLDNPLAEDLMGIYETMGDTLALQYGGSAAHNKIF
CERRGQWRAATQSQEFFRTLQRYYSNAYMDAEKQDAINVFLGYFQPQSDKPALWELGSDQHYNA
ARFLANSVPETSRSTMKRSLSESSIISESSPAALGPVGRHGLAEKDEEVKGLSDSAPEISTSET
AKIAASLRYKRLLCTVDLTKDFFFSYSYHIMHTLQRNLSNNVEGHTYYESMFVWNEYLTRRIRN
NVKDCMWTVALVYGFFKQVKLSVSEKNFRLTLISRRSRHYAGTRYLKRGVNEKGRVANDVETEQ
IVFEEAQDGNPGRISSVVQNRGSIPLFWSQETSRLNIKPDIILSPKDPNFEATRLHFENLGRRY
GNPIIILNLIKTREKRPRETILRAEFANAIRFINKGLSKEDRLRPLHWDLHKHSRKKGTNVLAI
LGRLATYALNLTSIFYCQLTPDLRGEGFQNQNPSTLENDDGECSTYDPPSKDETAPNLVVENGN
DSKDAKEDQQKEVTMLQKGVLRTNCIDCLDRTNVAQYAYGLVAFGRQLHALGLTESTNIDLDNP
LAEDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFFRTLQRYYSNAYMDAEKQ
DAINVFLGYFQPQSDKPALWELGSDQHYNAARFLANSVPETSRSTMKRSLSESSIISESSPAAL
GPVGRHGLAEKDEEVKGLSDSAPEISTSETAKIAASLRYKRLLCTVDLTKDFFFSYSYHIMHTL
QRNLSNNVEGHTYYESMFVWNEYLTRRIRNNVKDCMWTVALVYGFFKQVKLSVSEKNFRLTLIS
RRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFEEAQDGNPGRISSVVQNRGSIPLFWSQETSR
LNIKPDIILSPKDPNFEATRLHFENLGRRYGNPIIILNLIKTREKRPRETILRAEFANAIRFIN
KGLSKEDRLRPLHWDLHKHSRKKGTNVLAILGRLATYALNLTSIFYCQLTPDLRGEGFQNQNPS
TLENDDGECSTYDPPSKDETAPNLVVENGNDSKDAKEDQQKEVTMLQKGVLRTNCIDCLDRTNV
AQYAYGLVAFGRQLHALGLTESTNIDLDNPLAEDLMGIYETMGDTLALQYGGSAAHNKIFCERR
GQWRAATQSQEFFRTLQRYYSNAYMDAEKQDAINVFLGYFQPQSDKPALWELGSDQHYNAARFL
ANSVPETSRSTMKRSLSESSIISESSPAALGPVGRHGLAEKDEEVKGLSDSAPEISTSETAKIA
ASLRYKRLLCTVDLTKDFFFSYSYHIMHTLQRNLSNNVEGHTYYESMFVWNEYLTRRIRNNVKD
CMWTVALVYGFFKQVKLSVSEKNFRLTLISRRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFE
EAQDGNPGRISSVVQNRGSIPLFWSQETSRLNIKPDIILSPKDPNFEATRLHFENLGRRYGNPI
IILNLIKTREKRPRETILRAEFANAIRFINKGLSKEDRLRPLHWDLHKHSRKKGTNVLAILGRL
ATYALNLTSIFYCQLTPDLRGEGFQNQNPSTLENDDGECSTYDPPSKDETAPNLVVENGNDSKD
AKEDQQKEVTMLQKGVLRTNCIDCLDRTNVAQYAYGLVAFGRQLHALGLTESTNIDLDNPLAED
LMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFFRTLQRYYSNAYMDAEKQDAIN
VFLGYFQPQSDKPALWELGSDQHYNAARFLANSVPETSRSTMKRSLSESSIISESSPAALGPVG
RHGLAEKDEEVKGLSDSAPEISTSETAKIAASL(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	4719227-4716627(-)
Potential amino acid sequence	MHTLQRNLSNNVEGHTYYESMFVWNEYLTRRIRNNVKDCMWTVALVYGFFKQVKLSVSEKNFRL TLISRRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFEEAQDGNPGRISSVVQNRGSIPLFWSQ ETSRLNIKPDIILSPKDPNFEATRLHFENLGRRYGNPIIILNLIKTREKRPRETILRAEFANAI RFINKGLSKEDRLRPLHWDLHKHSRKKGTNVLAILGRLATYALNLTSIFYCQLTPDLRGEGFQN QNPSTLENDDGECSTYDPPSKDETAPNLVVENGNDSKDAKEDQQKEVTMLQKGVLRTNCIDCLD RTNVAQYAYGLVAFGRQLHALGLTESTNIDLDNPLAEDLMGIYETMGDTLALQYGGSAAHNKIF CERRGQWRAATQSQEFFRTLQRYYSNAYMDAEKQDAINVFLGYFQPQSDKPALWELGSDQHYNA ARFLANSVPETSRSTMKRSLSESSIISESSPAALGPVGRHGLAEKDEEVKGLSDSAPEISTSET AKIAASLRYKRLLCTVDLTKDFFFSYSYHIMHTLQRNLSNNVEGHTYYESMFVWNEYLTRRIRN NVKDCMWTVALVYGFFKQVKLSVSEKNFRLTLISRRSRHYAGTRYLKRGVNEKGRVANDVETEQ IVFEEAQDGNPGRISSVVQNRGSIPLFWSQETSRLNIKPDIILSPKDPNFEATRLHFENLGRRY GNPIIILNLIKTREKRPRETILRAEFANAIRFINKGLSKEDRLRPLHWDLHKHSRKKGTNVLAI LGRLATYALNLTSIFYCQLTPDLRGEGFQNQNPSTLENDDGECSTYDPPSKDETAPNLVVENGN DSKDAKEDQQKEVTMLQKGVLRTNCIDCLDRTNVAQYAYGLVAFGRQLHALGLTESTNIDLDNP LAEDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFFRTLQRYYSNAYMDAEKQ DAINVFLGYFQPQSDKPALWELGSDQHYNAARFLANSVPETSRSTMKRSLSESSIISESSPAAL GPVGRHGLAEKDEEVKGLSDSAPEISTSETAKIAASLRYKRLLCTVDLTKDFFFSYSYHIMHTL QRNLSNNVEGHTYYESMFVWNEYLTRRIRNNVKDCMWTVALVYGFFKQVKLSVSEKNFRLTLIS RRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFEEAQDGNPGRISSVVQNRGSIPLFWSQETSR LNIKPDIILSPKDPNFEATRLHFENLGRRYGNPIIILNLIKTREKRPRETILRAEFANAIRFIN KGLSKEDRLRPLHWDLHKHSRKKGTNVLAILGRLATYALNLTSIFYCQLTPDLRGEGFQNQNPS TLENDDGECSTYDPPSKDETAPNLVVENGNDSKDAKEDQQKEVTMLQKGVLRTNCIDCLDRTNV AQYAYGLVAFGRQLHALGLTESTNIDLDNPLAEDLMGIYETMGDTLALQYGGSAAHNKIFCERR GQWRAATQSQEFFRTLQRYYSNAYMDAEKQDAINVFLGYFQPQSDKPALWELGSDQHYNAARFL ANSVPETSRSTMKRSLSESSIISESSPAALGPVGRHGLAEKDEEVKGLSDSAPEISTSETAKIA ASLRYKRLLCTVDLTKDFFFSYSYHIMHTLQRNLSNNVEGHTYYESMFVWNEYLTRRIRNNVKD CMWTVALVYGFFKQVKLSVSEKNFRLTLISRRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFE EAQDGNPGRISSVVQNRGSIPLFWSQETSRLNIKPDIILSPKDPNFEATRLHFENLGRRYGNPI IILNLIKTREKRPRETILRAEFANAIRFINKGLSKEDRLRPLHWDLHKHSRKKGTNVLAILGRL ATYALNLTSIFYCQLTPDLRGEGFQNQNPSTLENDDGECSTYDPPSKDETAPNLVVENGNDSKD AKEDQQKEVTMLQKGVLRTNCIDCLDRTNVAQYAYGLVAFGRQLHALGLTESTNIDLDNPLAED LMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFFRTLQRYYSNAYMDAEKQDAIN VFLGYFQPQSDKPALWELGSDQHYNAARFLANSVPETSRSTMKRSLSESSIISESSPAALGPVG RHGLAEKDEEVKGLSDSAPEISTSETAKIAASL(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of AT3G14205_circ_g.3

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