Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os08g0155400_circ_g.5 |
ID in PlantcircBase | osa_circ_035901 |
Alias | NA |
Organism | Oryza sativa |
Position | chr8: 3189177-3189292 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ei-circRNA |
Identification method | circseq_cup |
Parent gene | Os08g0155550 |
Parent gene annotation |
Hypothetical protein. (Os08t0155550-00) |
Parent gene strand | + |
Alternative splicing | Os08g0155400_circ_g.2 Os08g0155400_circ_g.3 Os08g0155400_circ_g.4 |
Support reads | 2 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | TG-CA |
Number of exons covered | Os08t0155400-01:1 Os08t0155550-00:1 Os08t0155400-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.357039727 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2016 |