Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os05g0405000_circ_g.12 |
ID in PlantcircBase | osa_circ_042102 |
Alias | NA |
Organism | Oryza sativa |
Position | chr5: 19723790-19723902 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | CIRI-long |
Parent gene | Os05g0405000 |
Parent gene annotation |
Orthophosphate dikinase precursor (EC 2.7.9.1). (Os05t0405000-01 );Similar to Isoform 2 of Pyruvate, phosphate dikinase 1, chloro plastic. (Os05t0405000-02) |
Parent gene strand | - |
Alternative splicing | Os05g0405000_circ_g.5 Os05g0405000_circ_g.6 Os05g0405000_circ_g.7 Os05g0405000_circ_g.8 Os05g0405000_circ_g.9 Os05g0405000_circ_g.10 Os05g0405000_circ_g.11 Os05g0405000_circ_g.13 Os05g0405000_circ_g.14 Os05g0405000_circ_g.15 Os05g0405000_circ_g.16 |
Support reads | NA |
Tissues | leaf |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Os05t0405000-02:1 Os05t0405000-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.142330383 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | this study |