Plant Circular RNA Database

Detail information of Zm00001d011447_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d011447_circ_g.1
					
						ID in PlantcircBase
						zma_circ_009731
					
						Alias
						Zm08circ00058, zma_circ_0002801
					
						Organism
						
							Zea mays						
					
						Position
						
							chr8: 150754792-150756881  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d011447						
					
						Parent gene annotation
						
							MAG2-interacting protein 2
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d011447_T001:3
Zm00001d011447_T005:3
Zm00001d011447_T004:3
Zm00001d011447_T002:3
Zm00001d011447_T003:3

General Information
CircRNA Name	Zm00001d011447_circ_g.1
ID in PlantcircBase	zma_circ_009731
Alias	Zm08circ00058, zma_circ_0002801
Organism	Zea mays
Position	chr8: 150754792-150756881 JBrowse»
Reference genome	AGPv4.38
Type	e-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d011447
Parent gene annotation	MAG2-interacting protein 2
Parent gene strand	+
Alternative splicing	NA
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d011447_T001:3 Zm00001d011447_T005:3 Zm00001d011447_T004:3 Zm00001d011447_T002:3 Zm00001d011447_T003:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGTAGTTTACTCCTTTGTTAATTCTGTAAAGATGGAGAAAAAACACATACTCAAGGAAGCAGTG
CGGATAGCTGAGGCATATGGGTTGCAACGAACTGAGgtcccaaaatcaatgcatttcttcctta
gtgctcacttagatgagaagaatgtaaggcaaattatacggctgcttttatcgaaatttggcag
acgtcaac

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1845
Transcript exons: 150754792-150755151,150755249-150756467,150756616-150756
881
GTCCCAAAATCAATGCATTTCTTCCTTAGTGCTCACTTAGATGAGAAGAATGTAAGGCAAATTA
TACGGCTGCTTTTATCGAAATTTGGCAGACGTCAACCTGTTCGATCAGACAATGAGTGGGCTAA
CATGTGGCGTGATTTAAAACTCTTCCAAGAAAAGGCATTTCCTTTTCTTGATTCAGAATATATG
CTGGCCGAATTTATCAGAGGGCTATTGAAAGCTGGTAAATTTTCGCTAGCCAGGAATTATCTTG
GAGGAACCAGTGCAGTTTCTTTATCCACAGAGAAGGCTGAAAATCTTGTGATACAAGCTGCAAG
GGAGTATTTCTTCTCGGCTTCAACTTTATCTGGGAATGAAATTTGGAAAGCCAGGGAATGCCTA
AATTTGTTACCTAATAGCAAAAATGTTCAAGCAGAAACTGATATAATTGATGCTCTTACTGTTA
GACTTCCTTATCTAGGGGTGACTATCCTTCCTCTTCAGTTCAGGCAGGTAAAGGATCCTATGGA
TATCATCCGCATGGTGATAACATGTCAAGCAGGTGCATACCTTCATTTTGAAGAGATCATTGAT
GTCGCTAAACTTCTGGGATTAAGAAGTGAAGAGGAAGTAGCGGATGTGGAGGAGGCTATTGCCA
GAGAAGCTGTGGTAAATGGTGATCTTCAACTTGCCCTTGATATCTGTTTAAATTTAACAAAAAA
GAGTCATGGTGCAGTGTGGGATTTATGTGCTGCAATTGCTAGAGGCCCTCCACTTGACAATTTG
GATACTGGTACCCGTGAAAAGCTATTGGGTTTCGCTCTCAGCCATTGTGATGACGATTCTGTTG
GGGAATTGTTGAATGCTTGGAAGGAGCTTCATGCTCAGGGTACTTTTGAGAAATTAATGATTAC
AACCGCAACAAATCCTCCCAATTTCTTGATTGATGGATCTTCAATCACACCACTTCCTGTACAA
AGTGTGCAAGACATACTTGACCTGAGAGATGACAATGGCCATGATAGACGTAGCGACCTTGTGG
GAATTGTTAAAGACATGCTGTCAAAAGTTTGCTTGGACTTTTCTAATGGAGACACACATAATTG
GGAGTCTATGTTGGAAGAAAACCGGAAATTGTTGTGCTTTGGAGCACTGGTATTACCATGGCTT
TTGAAATTGTTCAGTAATGAAGCATGTGATGGTGAAATAATGGATCATCTCACTAGGAGATGTC
GATTTTCAACAAAAGTAAAAGCAGCAACCAGTATCATATATTGGTTAGTTATAAATGGTTTGGC
CCCCAATGATAATATAATCATGATTCTTGCAAAGTCTATAATGGAGCCTCCCATTGATGAAGAG
TTTGATGTACTTGGCTGCTCGGTTCTTTTGAATCTCATGGACCCTTTCAATGGAGTGAAAATAA
TAGAGGAAGAGCTAAAAAGACGAGAATCTTATCAAGAAATTAGCAGCATAATGAGTGTAGGAAT
GTTATATAGTTCCCTCAATAATTCTAAGAAAGAGTGCTCCACTCCTGAACAGAGGAGAAACCTG
TTGCTTCACAAATTTCATGAGAAGTTCACCTCAGCCGATACCGATGATTTAGACCAGGTTGATA
TGGCAAATACAACCTTCTGGAGAGAATGGAAATCAAAGTTAGAAGAGGATAAACAACTGGCTGA
TCAAGCGCGGATGCTCAAGCAGATATTACCTGATATAGACACATCTCGATTCTTGTCTGGTGAT
GTTAATTATATCAAAATAGTAGTTTACTCCTTTGTTAATTCTGTAAAGATGGAGAAAAAACACA
TACTCAAGGAAGCAGTGCGGATAGCTGAGGCATATGGGTTGCAACGAACTGAG
						
					

						Genomic sequence
						
							GTCCCAAAATCAATGCATTTCTTCCTTAGTGCTCACTTAGATGAGAAGAATGTAAGGCAAATTA
TACGGCTGCTTTTATCGAAATTTGGCAGACGTCAACCTGTTCGATCAGACAATGAGTGGGCTAA
CATGTGGCGTGATTTAAAACTCTTCCAAGAAAAGGCATTTCCTTTTCTTGATTCAGAATATATG
CTGGCCGAATTTATCAGAGGGCTATTGAAAGCTGGTAAATTTTCGCTAGCCAGGAATTATCTTG
GAGGAACCAGTGCAGTTTCTTTATCCACAGAGAAGGCTGAAAATCTTGTGATACAAGCTGCAAG
GGAGTATTTCTTCTCGGCTTCAACTTTATCTGGGAATGAAGTGAGTTGATGTTACCAATTTTTT
TTGCCATCCAGTTATTACTCTGCCATTTCATTTCTGTGATTAATGCTAACTTGGATTATACAAT
CCCTTGCAGATTTGGAAAGCCAGGGAATGCCTAAATTTGTTACCTAATAGCAAAAATGTTCAAG
CAGAAACTGATATAATTGATGCTCTTACTGTTAGACTTCCTTATCTAGGGGTGACTATCCTTCC
TCTTCAGTTCAGGCAGGTAAAGGATCCTATGGATATCATCCGCATGGTGATAACATGTCAAGCA
GGTGCATACCTTCATTTTGAAGAGATCATTGATGTCGCTAAACTTCTGGGATTAAGAAGTGAAG
AGGAAGTAGCGGATGTGGAGGAGGCTATTGCCAGAGAAGCTGTGGTAAATGGTGATCTTCAACT
TGCCCTTGATATCTGTTTAAATTTAACAAAAAAGAGTCATGGTGCAGTGTGGGATTTATGTGCT
GCAATTGCTAGAGGCCCTCCACTTGACAATTTGGATACTGGTACCCGTGAAAAGCTATTGGGTT
TCGCTCTCAGCCATTGTGATGACGATTCTGTTGGGGAATTGTTGAATGCTTGGAAGGAGCTTCA
TGCTCAGGGTACTTTTGAGAAATTAATGATTACAACCGCAACAAATCCTCCCAATTTCTTGATT
GATGGATCTTCAATCACACCACTTCCTGTACAAAGTGTGCAAGACATACTTGACCTGAGAGATG
ACAATGGCCATGATAGACGTAGCGACCTTGTGGGAATTGTTAAAGACATGCTGTCAAAAGTTTG
CTTGGACTTTTCTAATGGAGACACACATAATTGGGAGTCTATGTTGGAAGAAAACCGGAAATTG
TTGTGCTTTGGAGCACTGGTATTACCATGGCTTTTGAAATTGTTCAGTAATGAAGCATGTGATG
GTGAAATAATGGATCATCTCACTAGGAGATGTCGATTTTCAACAAAAGTAAAAGCAGCAACCAG
TATCATATATTGGTTAGTTATAAATGGTTTGGCCCCCAATGATAATATAATCATGATTCTTGCA
AAGTCTATAATGGAGCCTCCCATTGATGAAGAGTTTGATGTACTTGGCTGCTCGGTTCTTTTGA
ATCTCATGGACCCTTTCAATGGAGTGAAAATAATAGAGGAAGAGCTAAAAAGACGAGAATCTTA
TCAAGAAATTAGCAGCATAATGAGTGTAGGAATGTTATATAGTTCCCTCAATAATTCTAAGAAA
GAGTGCTCCACTCCTGAACAGAGGAGAAACCTGTTGCTTCACAAATTTCATGAGAAGTTCACCT
CAGCCGATACCGGTAGGTGTACTAAAATCAACAAGTCATCAATATGGTCACTATTTTACTATTG
AATATTCTGCTGAGCTCAATCTTCTGCTGAGTTTTATTTGAATTGTTTTTGTGCTAATACATAC
CATATTCATTTTGTTTCTACCAACTTTGACAGATGATTTAGACCAGGTTGATATGGCAAATACA
ACCTTCTGGAGAGAATGGAAATCAAAGTTAGAAGAGGATAAACAACTGGCTGATCAAGCGCGGA
TGCTCAAGCAGATATTACCTGATATAGACACATCTCGATTCTTGTCTGGTGATGTTAATTATAT
CAAAATAGTAGTTTACTCCTTTGTTAATTCTGTAAAGATGGAGAAAAAACACATACTCAAGGAA
GCAGTGCGGATAGCTGAGGCATATGGGTTGCAACGAACTGAG
						
					

			
		

Sequences
Splice junction sequence	AGTAGTTTACTCCTTTGTTAATTCTGTAAAGATGGAGAAAAAACACATACTCAAGGAAGCAGTG CGGATAGCTGAGGCATATGGGTTGCAACGAACTGAGgtcccaaaatcaatgcatttcttcctta gtgctcacttagatgagaagaatgtaaggcaaattatacggctgcttttatcgaaatttggcag acgtcaac
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1845 Transcript exons: 150754792-150755151,150755249-150756467,150756616-150756 881 GTCCCAAAATCAATGCATTTCTTCCTTAGTGCTCACTTAGATGAGAAGAATGTAAGGCAAATTA TACGGCTGCTTTTATCGAAATTTGGCAGACGTCAACCTGTTCGATCAGACAATGAGTGGGCTAA CATGTGGCGTGATTTAAAACTCTTCCAAGAAAAGGCATTTCCTTTTCTTGATTCAGAATATATG CTGGCCGAATTTATCAGAGGGCTATTGAAAGCTGGTAAATTTTCGCTAGCCAGGAATTATCTTG GAGGAACCAGTGCAGTTTCTTTATCCACAGAGAAGGCTGAAAATCTTGTGATACAAGCTGCAAG GGAGTATTTCTTCTCGGCTTCAACTTTATCTGGGAATGAAATTTGGAAAGCCAGGGAATGCCTA AATTTGTTACCTAATAGCAAAAATGTTCAAGCAGAAACTGATATAATTGATGCTCTTACTGTTA GACTTCCTTATCTAGGGGTGACTATCCTTCCTCTTCAGTTCAGGCAGGTAAAGGATCCTATGGA TATCATCCGCATGGTGATAACATGTCAAGCAGGTGCATACCTTCATTTTGAAGAGATCATTGAT GTCGCTAAACTTCTGGGATTAAGAAGTGAAGAGGAAGTAGCGGATGTGGAGGAGGCTATTGCCA GAGAAGCTGTGGTAAATGGTGATCTTCAACTTGCCCTTGATATCTGTTTAAATTTAACAAAAAA GAGTCATGGTGCAGTGTGGGATTTATGTGCTGCAATTGCTAGAGGCCCTCCACTTGACAATTTG GATACTGGTACCCGTGAAAAGCTATTGGGTTTCGCTCTCAGCCATTGTGATGACGATTCTGTTG GGGAATTGTTGAATGCTTGGAAGGAGCTTCATGCTCAGGGTACTTTTGAGAAATTAATGATTAC AACCGCAACAAATCCTCCCAATTTCTTGATTGATGGATCTTCAATCACACCACTTCCTGTACAA AGTGTGCAAGACATACTTGACCTGAGAGATGACAATGGCCATGATAGACGTAGCGACCTTGTGG GAATTGTTAAAGACATGCTGTCAAAAGTTTGCTTGGACTTTTCTAATGGAGACACACATAATTG GGAGTCTATGTTGGAAGAAAACCGGAAATTGTTGTGCTTTGGAGCACTGGTATTACCATGGCTT TTGAAATTGTTCAGTAATGAAGCATGTGATGGTGAAATAATGGATCATCTCACTAGGAGATGTC GATTTTCAACAAAAGTAAAAGCAGCAACCAGTATCATATATTGGTTAGTTATAAATGGTTTGGC CCCCAATGATAATATAATCATGATTCTTGCAAAGTCTATAATGGAGCCTCCCATTGATGAAGAG TTTGATGTACTTGGCTGCTCGGTTCTTTTGAATCTCATGGACCCTTTCAATGGAGTGAAAATAA TAGAGGAAGAGCTAAAAAGACGAGAATCTTATCAAGAAATTAGCAGCATAATGAGTGTAGGAAT GTTATATAGTTCCCTCAATAATTCTAAGAAAGAGTGCTCCACTCCTGAACAGAGGAGAAACCTG TTGCTTCACAAATTTCATGAGAAGTTCACCTCAGCCGATACCGATGATTTAGACCAGGTTGATA TGGCAAATACAACCTTCTGGAGAGAATGGAAATCAAAGTTAGAAGAGGATAAACAACTGGCTGA TCAAGCGCGGATGCTCAAGCAGATATTACCTGATATAGACACATCTCGATTCTTGTCTGGTGAT GTTAATTATATCAAAATAGTAGTTTACTCCTTTGTTAATTCTGTAAAGATGGAGAAAAAACACA TACTCAAGGAAGCAGTGCGGATAGCTGAGGCATATGGGTTGCAACGAACTGAG
Genomic sequence	GTCCCAAAATCAATGCATTTCTTCCTTAGTGCTCACTTAGATGAGAAGAATGTAAGGCAAATTA TACGGCTGCTTTTATCGAAATTTGGCAGACGTCAACCTGTTCGATCAGACAATGAGTGGGCTAA CATGTGGCGTGATTTAAAACTCTTCCAAGAAAAGGCATTTCCTTTTCTTGATTCAGAATATATG CTGGCCGAATTTATCAGAGGGCTATTGAAAGCTGGTAAATTTTCGCTAGCCAGGAATTATCTTG GAGGAACCAGTGCAGTTTCTTTATCCACAGAGAAGGCTGAAAATCTTGTGATACAAGCTGCAAG GGAGTATTTCTTCTCGGCTTCAACTTTATCTGGGAATGAAGTGAGTTGATGTTACCAATTTTTT TTGCCATCCAGTTATTACTCTGCCATTTCATTTCTGTGATTAATGCTAACTTGGATTATACAAT CCCTTGCAGATTTGGAAAGCCAGGGAATGCCTAAATTTGTTACCTAATAGCAAAAATGTTCAAG CAGAAACTGATATAATTGATGCTCTTACTGTTAGACTTCCTTATCTAGGGGTGACTATCCTTCC TCTTCAGTTCAGGCAGGTAAAGGATCCTATGGATATCATCCGCATGGTGATAACATGTCAAGCA GGTGCATACCTTCATTTTGAAGAGATCATTGATGTCGCTAAACTTCTGGGATTAAGAAGTGAAG AGGAAGTAGCGGATGTGGAGGAGGCTATTGCCAGAGAAGCTGTGGTAAATGGTGATCTTCAACT TGCCCTTGATATCTGTTTAAATTTAACAAAAAAGAGTCATGGTGCAGTGTGGGATTTATGTGCT GCAATTGCTAGAGGCCCTCCACTTGACAATTTGGATACTGGTACCCGTGAAAAGCTATTGGGTT TCGCTCTCAGCCATTGTGATGACGATTCTGTTGGGGAATTGTTGAATGCTTGGAAGGAGCTTCA TGCTCAGGGTACTTTTGAGAAATTAATGATTACAACCGCAACAAATCCTCCCAATTTCTTGATT GATGGATCTTCAATCACACCACTTCCTGTACAAAGTGTGCAAGACATACTTGACCTGAGAGATG ACAATGGCCATGATAGACGTAGCGACCTTGTGGGAATTGTTAAAGACATGCTGTCAAAAGTTTG CTTGGACTTTTCTAATGGAGACACACATAATTGGGAGTCTATGTTGGAAGAAAACCGGAAATTG TTGTGCTTTGGAGCACTGGTATTACCATGGCTTTTGAAATTGTTCAGTAATGAAGCATGTGATG GTGAAATAATGGATCATCTCACTAGGAGATGTCGATTTTCAACAAAAGTAAAAGCAGCAACCAG TATCATATATTGGTTAGTTATAAATGGTTTGGCCCCCAATGATAATATAATCATGATTCTTGCA AAGTCTATAATGGAGCCTCCCATTGATGAAGAGTTTGATGTACTTGGCTGCTCGGTTCTTTTGA ATCTCATGGACCCTTTCAATGGAGTGAAAATAATAGAGGAAGAGCTAAAAAGACGAGAATCTTA TCAAGAAATTAGCAGCATAATGAGTGTAGGAATGTTATATAGTTCCCTCAATAATTCTAAGAAA GAGTGCTCCACTCCTGAACAGAGGAGAAACCTGTTGCTTCACAAATTTCATGAGAAGTTCACCT CAGCCGATACCGGTAGGTGTACTAAAATCAACAAGTCATCAATATGGTCACTATTTTACTATTG AATATTCTGCTGAGCTCAATCTTCTGCTGAGTTTTATTTGAATTGTTTTTGTGCTAATACATAC CATATTCATTTTGTTTCTACCAACTTTGACAGATGATTTAGACCAGGTTGATATGGCAAATACA ACCTTCTGGAGAGAATGGAAATCAAAGTTAGAAGAGGATAAACAACTGGCTGATCAAGCGCGGA TGCTCAAGCAGATATTACCTGATATAGACACATCTCGATTCTTGTCTGGTGATGTTAATTATAT CAAAATAGTAGTTTACTCCTTTGTTAATTCTGTAAAGATGGAGAAAAAACACATACTCAAGGAA GCAGTGCGGATAGCTGAGGCATATGGGTTGCAACGAACTGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.297724836

Conservation Information
Conserved circRNAs	NA
PMCS	0.297724836

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							150754805-150756878(+)
						
					

						Potential amino acid sequence
						
							MHFFLSAHLDEKNVRQIIRLLLSKFGRRQPVRSDNEWANMWRDLKLFQEKAFPFLDSEYMLAEF
IRGLLKAGKFSLARNYLGGTSAVSLSTEKAENLVIQAAREYFFSASTLSGNEIWKARECLNLLP
NSKNVQAETDIIDALTVRLPYLGVTILPLQFRQVKDPMDIIRMVITCQAGAYLHFEEIIDVAKL
LGLRSEEEVADVEEAIAREAVVNGDLQLALDICLNLTKKSHGAVWDLCAAIARGPPLDNLDTGT
REKLLGFALSHCDDDSVGELLNAWKELHAQGTFEKLMITTATNPPNFLIDGSSITPLPVQSVQD
ILDLRDDNGHDRRSDLVGIVKDMLSKVCLDFSNGDTHNWESMLEENRKLLCFGALVLPWLLKLF
SNEACDGEIMDHLTRRCRFSTKVKAATSIIYWLVINGLAPNDNIIMILAKSIMEPPIDEEFDVL
GCSVLLNLMDPFNGVKIIEEELKRRESYQEISSIMSVGMLYSSLNNSKKECSTPEQRRNLLLHK
FHEKFTSADTDDLDQVDMANTTFWREWKSKLEEDKQLADQARMLKQILPDIDTSRFLSGDVNYI
KIVVYSFVNSVKMEKKHILKEAVRIAEAYGLQRTEVPKSMHFFLSAHLDEKNVRQIIRLLLSKF
GRRQPVRSDNEWANMWRDLKLFQEKAFPFLDSEYMLAEFIRGLLKAGKFSLARNYLGGTSAVSL
STEKAENLVIQAAREYFFSASTLSGNEIWKARECLNLLPNSKNVQAETDIIDALTVRLPYLGVT
ILPLQFRQVKDPMDIIRMVITCQAGAYLHFEEIIDVAKLLGLRSEEEVADVEEAIAREAVVNGD
LQLALDICLNLTKKSHGAVWDLCAAIARGPPLDNLDTGTREKLLGFALSHCDDDSVGELLNAWK
ELHAQGTFEKLMITTATNPPNFLIDGSSITPLPVQSVQDILDLRDDNGHDRRSDLVGIVKDMLS
KVCLDFSNGDTHNWESMLEENRKLLCFGALVLPWLLKLFSNEACDGEIMDHLTRRCRFSTKVKA
ATSIIYWLVINGLAPNDNIIMILAKSIMEPPIDEEFDVLGCSVLLNLMDPFNGVKIIEEELKRR
ESYQEISSIMSVGMLYSSLNNSKKECSTPEQRRNLLLHKFHEKFTSADTDDLDQVDMANTTFWR
EWKSKLEEDKQLADQARMLKQILPDIDTSRFLSGDVNYIKIVVYSFVNSVKMEKKHILKEAVRI
AEAYGLQRTEVPKSMHFFLSAHLDEKNVRQIIRLLLSKFGRRQPVRSDNEWANMWRDLKLFQEK
AFPFLDSEYMLAEFIRGLLKAGKFSLARNYLGGTSAVSLSTEKAENLVIQAAREYFFSASTLSG
NEIWKARECLNLLPNSKNVQAETDIIDALTVRLPYLGVTILPLQFRQVKDPMDIIRMVITCQAG
AYLHFEEIIDVAKLLGLRSEEEVADVEEAIAREAVVNGDLQLALDICLNLTKKSHGAVWDLCAA
IARGPPLDNLDTGTREKLLGFALSHCDDDSVGELLNAWKELHAQGTFEKLMITTATNPPNFLID
GSSITPLPVQSVQDILDLRDDNGHDRRSDLVGIVKDMLSKVCLDFSNGDTHNWESMLEENRKLL
CFGALVLPWLLKLFSNEACDGEIMDHLTRRCRFSTKVKAATSIIYWLVINGLAPNDNIIMILAK
SIMEPPIDEEFDVLGCSVLLNLMDPFNGVKIIEEELKRRESYQEISSIMSVGMLYSSLNNSKKE
CSTPEQRRNLLLHKFHEKFTSADTDDLDQVDMANTTFWREWKSKLEEDKQLADQARMLKQILPD
IDTSRFLSGDVNYIKIVVYSFVNSVKMEKKHILKEAVRIAEAYGLQRTEVPKSMHFFLSAHLDE
KNVRQIIRLLLSKFGRRQPVRSDNEWANMWRDLKLFQEKAFPFLDSEYMLAEFIRGLLKAGKFS
LARNYLGGTSAVSLSTEKAENLVIQAAREYFFSASTLSGNEIWKARECLNLLPNSKNVQAETDI
IDALTVRLPYLGVTILPLQFRQVKDPMDIIRMVITCQAGAYLHFEEIIDVAKLLGLRSEEEVAD
VEEAIAREAVVNGDLQLALDICLNLTKKSHGAVWDLCAAIARGPPLDNLDTGTREKLLGFALSH
CDDDSVGELLNAWKELHAQGTFEKLMITTATNPPNFLIDGSSITPLPVQSVQDILDLRDDNGHD
RRSDLVGIVKDMLSKVCLDFSNGDTHNWESMLEENRKLLCFGALVLPWLLKLFSNEACDGEIMD
HLTRRCRFSTKVKAATSIIYWLVINGLAPNDNIIMILAKSIMEPPIDEEFDVLGCSVLLNLMDP
FNGVKIIEEELKRRESYQEISSIMSVGMLYSSLNNSKKECSTPEQRRNLLLHKFHEKFTSADTD
DLDQVDMANTTFWREWKSKLEEDKQLADQARMLKQILPDIDTSRFLSGDVNYIKIVVYSFVNSV
KMEKKHILKEAVRIAEAYGLQRTE(+)
						
					

						Sponge-miRNAs
						
							zma-miR172c-3p 						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	150754805-150756878(+)
Potential amino acid sequence	MHFFLSAHLDEKNVRQIIRLLLSKFGRRQPVRSDNEWANMWRDLKLFQEKAFPFLDSEYMLAEF IRGLLKAGKFSLARNYLGGTSAVSLSTEKAENLVIQAAREYFFSASTLSGNEIWKARECLNLLP NSKNVQAETDIIDALTVRLPYLGVTILPLQFRQVKDPMDIIRMVITCQAGAYLHFEEIIDVAKL LGLRSEEEVADVEEAIAREAVVNGDLQLALDICLNLTKKSHGAVWDLCAAIARGPPLDNLDTGT REKLLGFALSHCDDDSVGELLNAWKELHAQGTFEKLMITTATNPPNFLIDGSSITPLPVQSVQD ILDLRDDNGHDRRSDLVGIVKDMLSKVCLDFSNGDTHNWESMLEENRKLLCFGALVLPWLLKLF SNEACDGEIMDHLTRRCRFSTKVKAATSIIYWLVINGLAPNDNIIMILAKSIMEPPIDEEFDVL GCSVLLNLMDPFNGVKIIEEELKRRESYQEISSIMSVGMLYSSLNNSKKECSTPEQRRNLLLHK FHEKFTSADTDDLDQVDMANTTFWREWKSKLEEDKQLADQARMLKQILPDIDTSRFLSGDVNYI KIVVYSFVNSVKMEKKHILKEAVRIAEAYGLQRTEVPKSMHFFLSAHLDEKNVRQIIRLLLSKF GRRQPVRSDNEWANMWRDLKLFQEKAFPFLDSEYMLAEFIRGLLKAGKFSLARNYLGGTSAVSL STEKAENLVIQAAREYFFSASTLSGNEIWKARECLNLLPNSKNVQAETDIIDALTVRLPYLGVT ILPLQFRQVKDPMDIIRMVITCQAGAYLHFEEIIDVAKLLGLRSEEEVADVEEAIAREAVVNGD LQLALDICLNLTKKSHGAVWDLCAAIARGPPLDNLDTGTREKLLGFALSHCDDDSVGELLNAWK ELHAQGTFEKLMITTATNPPNFLIDGSSITPLPVQSVQDILDLRDDNGHDRRSDLVGIVKDMLS KVCLDFSNGDTHNWESMLEENRKLLCFGALVLPWLLKLFSNEACDGEIMDHLTRRCRFSTKVKA ATSIIYWLVINGLAPNDNIIMILAKSIMEPPIDEEFDVLGCSVLLNLMDPFNGVKIIEEELKRR ESYQEISSIMSVGMLYSSLNNSKKECSTPEQRRNLLLHKFHEKFTSADTDDLDQVDMANTTFWR EWKSKLEEDKQLADQARMLKQILPDIDTSRFLSGDVNYIKIVVYSFVNSVKMEKKHILKEAVRI AEAYGLQRTEVPKSMHFFLSAHLDEKNVRQIIRLLLSKFGRRQPVRSDNEWANMWRDLKLFQEK AFPFLDSEYMLAEFIRGLLKAGKFSLARNYLGGTSAVSLSTEKAENLVIQAAREYFFSASTLSG NEIWKARECLNLLPNSKNVQAETDIIDALTVRLPYLGVTILPLQFRQVKDPMDIIRMVITCQAG AYLHFEEIIDVAKLLGLRSEEEVADVEEAIAREAVVNGDLQLALDICLNLTKKSHGAVWDLCAA IARGPPLDNLDTGTREKLLGFALSHCDDDSVGELLNAWKELHAQGTFEKLMITTATNPPNFLID GSSITPLPVQSVQDILDLRDDNGHDRRSDLVGIVKDMLSKVCLDFSNGDTHNWESMLEENRKLL CFGALVLPWLLKLFSNEACDGEIMDHLTRRCRFSTKVKAATSIIYWLVINGLAPNDNIIMILAK SIMEPPIDEEFDVLGCSVLLNLMDPFNGVKIIEEELKRRESYQEISSIMSVGMLYSSLNNSKKE CSTPEQRRNLLLHKFHEKFTSADTDDLDQVDMANTTFWREWKSKLEEDKQLADQARMLKQILPD IDTSRFLSGDVNYIKIVVYSFVNSVKMEKKHILKEAVRIAEAYGLQRTEVPKSMHFFLSAHLDE KNVRQIIRLLLSKFGRRQPVRSDNEWANMWRDLKLFQEKAFPFLDSEYMLAEFIRGLLKAGKFS LARNYLGGTSAVSLSTEKAENLVIQAAREYFFSASTLSGNEIWKARECLNLLPNSKNVQAETDI IDALTVRLPYLGVTILPLQFRQVKDPMDIIRMVITCQAGAYLHFEEIIDVAKLLGLRSEEEVAD VEEAIAREAVVNGDLQLALDICLNLTKKSHGAVWDLCAAIARGPPLDNLDTGTREKLLGFALSH CDDDSVGELLNAWKELHAQGTFEKLMITTATNPPNFLIDGSSITPLPVQSVQDILDLRDDNGHD RRSDLVGIVKDMLSKVCLDFSNGDTHNWESMLEENRKLLCFGALVLPWLLKLFSNEACDGEIMD HLTRRCRFSTKVKAATSIIYWLVINGLAPNDNIIMILAKSIMEPPIDEEFDVLGCSVLLNLMDP FNGVKIIEEELKRRESYQEISSIMSVGMLYSSLNNSKKECSTPEQRRNLLLHKFHEKFTSADTD DLDQVDMANTTFWREWKSKLEEDKQLADQARMLKQILPDIDTSRFLSGDVNYIKIVVYSFVNSV KMEKKHILKEAVRIAEAYGLQRTE(+)
Sponge-miRNAs	zma-miR172c-3p
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b

circRNA

Detail information of Zm00001d011447_circ_g.1

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