Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G18500_circ_g.1 |
ID in PlantcircBase | ath_circ_003294 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 6369421-6369533 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | circRNA_finder, circseq_cup, CIRI-full |
Parent gene | AT1G18500 |
Parent gene annotation |
2-isopropylmalate synthase 1, chloroplastic |
Parent gene strand | + |
Alternative splicing | AT1G18500_circ_g.2 |
Support reads | 2 |
Tissues | leaf |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | AT1G18500.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.230100487 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |