Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G04930_circ_g.2 |
ID in PlantcircBase | ath_circ_000730 |
Alias | At_ciR2890 |
Organism | Arabidpsis thaliana |
Position | chr1: 1396786-1397707 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | find_circ |
Parent gene | AT1G04930 |
Parent gene annotation |
Hydroxyproline-rich glycoprotein family protein |
Parent gene strand | - |
Alternative splicing | AT1G04930_circ_g.1 |
Support reads | 3 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G04930.2:4 AT1G04930.3:4 AT1G04930.1:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.107201618 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |