Detail information of BGIOSGA008902_circ_igg.5


General Information
CircRNA Name BGIOSGA008902_circ_igg.5
ID in PlantcircBase osi_circ_012187
Alias Chr02:30632888_30637760(ZS97RS2)
Organism Oryza sativa ssp. indica
Position chr2: 31208168-31213040  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   igg-circRNA
Identification method CIRI2, CIRCexplorer2
Parent gene NA
Parent gene annotation NA
Parent gene strand NA
Alternative splicing NA
Support reads NA
Tissues root, leaf, panicle
Exon boundary   NA-NA
Splicing signals   GT-CA
Number of exons covered NA
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GTTCGCTGCTGGTAGCTGTGCCTTGCTGTTGCTGGCCCAGGCTCCTTTGGGGTTCAAGTGATGT
AGATTCCAGCTGTGGGTTCAAGAGGATCAGATAATGgactggcattccagacactgtttgcata
cttgatgatgaaccaaggagtactgggcgtcattgtggagagattgatttgtgtctttgtgaaa
gtaaaaaa
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GACTGGCATTCCAGACACTGTTTGCATACTTGATGATGAACCAAGGAGTACTGGGCGTCATTGT
GGAGAGATTGATTTGTGTCTTTGTGAAAGTAAAAAAGTTAGCTTCTCCATTGCAGTAATGGTGC
AGCCGGTGTCAGGTCCAGTCTGTCTTTTTGGAACAGAATTCCAGAAAAAAGTGTGCTGGGAAAT
CTTGGTGGCAGGGTCAGAACAGGGAATGGAAGCTGGCCAAGTTGGTCTTCGATTGGTGACTAAG
GGTGAAAGGATGACAACCGTTGCAAAAGAGTGGAATATTGGTGCATCAAGTATTGCTGATGGCA
GGTACCAGCTCGTGACAACTGCTGTTTCTTTTGCATGAAAAAAAAAGAATCAAGAGAGCTAACC
TGTTTATGTTCAGATTCACATCGAAATACTAGTCTTACATGGACTTGTCGCATGTCTTTTTGGG
TGGAACATTTCATCGACTTTTTTTTTTTCCTGGTAATGCCTGACTGTAACCAATGTTAATTTTC
AGGTGGCATCTTGTCACTGTGACTATAGATGCTGATCTAGGTGAAGCAACTTCTTTCATAGACG
GAGTCTACGATGGATATCAGAATGCGTTGCCATTGCCTAGAAATAATGGCATCTGGGAACCTGG
GACAGATATTTGGGTTGGTGCTAGGCCACCCACGGACTTAGATGCCTTTGGTAGGTCAGACAGC
GAGGGATCAGACTCAAAGATGCAGATCATGGATGCTTTTCTATGGGGAAGATGTCTGACTGAAG
ATGAGGTTGCTATGTTGCATACAGCCATCTGTTCTGCTGAATATGGCCTTTTTGATCTTGCTGC
TGAGGATACTTGGCATGGAAGTTATTCTGCAAGGGCAAGTTCTTGTTTCGACCAATCTATTCCT
ACTGTTTATCTTGCTTTTATTTCATTAATTAGAAGGGAACATGAAACTCCTAAGGCCTTGTTCG
TTTAATCCCCAAGAGTGAGGGATTGAGGGGGAATGATTCCACAACACAATAGGTGTGGAACAAA
TCCCCTCCAAATCCCCTTGTGGGAGGGATTAAACGAACAAGGCCTGAACAATTACTTATTTCTA
CCTTTCTTGAGAGCCATGAAATGGAAGGGATTATGAAGTTATGCATGTGATATTCATACATCTA
ATATTGTTTCAACAGGTGGATGACTGGGAAAGTGAAGAAGCAAATTTTGAACTATATGATCAAG
AGGACGTTGAATGGGATGGACAGTACTCCAGTGGTAGGAAACGTCATGCGCGTGATTCTGTAGC
TATTGACATTGACTCCTTTGCTAGAAGACCAAGGAAACCAAGATTTGAGACACGAGAGGAAGTC
AATCAGCGCATGCTTTCTGTTGAAAGGGCTGTTAGAGAGGCTCTTATTGCGAAGGGAGAGAGAA
ATTTTACTGATCAAGAGTTCCCTCCGGATGATCGATCTCTGTTTGTAGATCCGATGAACCCATC
TCTAAAATTGCAGGTACTATTGCATGCATTTGTCTACCACTTGTACACTAAGAACTGGCTGAGT
TTCTGACTTGTGCACTAAGAATTGGCTTGATCTTTGACATTGATCTGTCATCTGTGTTTCTGAG
TTTAGGTTGTCTCTGAGTGGATGAGGCCTTCTGATATTGCGAAGGAGGTATCTATCAGTTCACA
ACCGTGCTTATTTTCTGGTTCTGTGAATTCGTCAGATGTGTGTCAGGTACGCAGATTTTGCTTT
GTGCTGATGTGGGGTCTTCCCCTATACTAGAATTTCAACTTTATACATTTCCATCTTCCTATAC
ATGACACACAATCCAATTTGTCCGATTGTTCTTTTCAGGGTCGGTTGGGCGACTGTTGGTTCTT
GAGCGCTGTTGCAGTTTTGACAGAGATGGCCCGTATATCTGAAGTTATAATCACTCCTGAGTAT
AATGAAGAAGGGATTTACACTGTCAGATTCTGTATCCAGGTATTCAATGATCTGACCCATCTGT
CCTCCATTCCATTTTCTTGGGTTGTTCCTTTGGTAAAGTAAATTGGTAGAGCACACCATCTTGG
TGAGATTTAACATTTTAGTCTCATACAGAGTTAAATATCAAAGTTGAATTGGTTAAGCAAACTA
ACAGATTTGTGAGCTGCAAGTTGATTCTCTTTGTTACTTTGTGTTCAACATATATCAACAAGCC
ATTTTCTTCTGCATTGTGGGAAAGAAGTTCTAATCAGAAATAATACAACAGCCACAAGTTACTA
GAGCTATGGTGGATATGTGTGCTACCTAATAGTGCTGTTAGAGGCTCAGTGAAACCTTGACTTG
CAGATTTTAGTTTGGATAAATTCCGCTAGTTCGAAATAATTAATTTGGACAAGTTGATACTACA
TAAATACATAAACAGTTGTTAGAGCTGTCTAATATATATTTATACATTGGCTTACAACCTATAT
GCTTTAATTAAGAAAAATGGGATTCATGACTTTAGATTTGCTATTCATATTCCATAGGGTGCAT
ATAAGAATGCCAACGTCTTCTGAAATGCTAACATTGCGAGACCCTAGTAAGGGGCATACCACCA
TGAAGAACATAATGCATACCATTATCTTGCTCGAGTTTTAGGGAAATTCCCAAATCGAATGACA
CAATATATACAATTACACATGTGCATTATGCCCTGCATAAACAACATTGAAAACCATGAGTGAA
CAAGTCACTAATGCACAACTTACATATGCAGTATATGCTTGTAAATTTTACGATAAAACTCAAA
GATAAGTTGATAAAAGTGAAATAATAGTATAAATAGCTCATATTCACCAGACCTTGTGGATTAC
TCCCTCCTTCCCAAATTGATCATCATGTAATGGAATTCAAAATTTCTCAAATTGATCATCATAT
AACCGCATAGATGCGGATTTTATCAGAATACAATTAATGCAGCATGGGAGAATGTGTGCATGCT
AGGTGTAATTGGTATGGTGTTTTGATCGATGCATGCATTGTGGGAGAATGTGTGTATGGTGTCT
TGATTGATGTGATTTAAATTATCTTTGGTCTTGGTGCACAAACATATATGATGATCATTTTGGG
AAGGAGGGAGTATTTCCCACCAACACAAAAAAGACTTGAGATTGTCCTGTGAAGAACTATCTTT
GACCAGTTTGATCTGAGCTTATATTTCAATGTTCTGTAAATTACTAGGGTGAATGGGTGGCAGT
GGTGGTTGATGATTGGATCCCCTGTGAATCTCCGGGGAAACCAGCATTTGCTACTAGTAGAAAG
CAAAATGAGCTGTGGGTATCCATTCTTGAAAAAGCTTATGCAAAGCTTCATGGCTCTTATGAGG
CATTGGAGGGTGGGCTTGTGCAAGATGCTCTAGTGGATCTCACAGGAGGAGCTGGTGAAGAGAT
TGACATGCGGAGCCCCCAAGCGCAGATTGATCTTGCTAGTGGAAGATTGTGGTCTCAGTTGTTG
CATTTTAAACAAGAGGGCTTTCTTCTTGGTGCTGGAAGTCCTTCTGGCTCGGATGCTCATATTT
CATCAAGTGGCATTGTTCAGGGACATGCTTACTCAATTTTGCAGGTTTGCTCTGACTTGTCTGT
ATCTTTTGGCAATCACTTAGTTCCCATTCTTTTTGCGCTAGACAAATTTATATTTTATGTTACA
GGTAAGAGAAGTTGATGGCCATAAGCTCGTGCAAATTAGAAATCCATGGGCAAATGAAGTTGAA
TGGAATGGTCCGTGGTCAGACTCATCACAAGAGTGGACTGAGCGAATGAAGCACAAACTTAAGC
ATGTTCCACAGGTACTTGCTCTTCTCTGTGACCGTGTACTTGAACAGCTGGTATTCCACTAATT
GTGATTAGAAAGATACACAACTGCGTCAAATTTAATAGATGAACCCACCAAATACTGGTTCCTT
TTAGCATGATAAAATTGTTGGTCTGTTGCTTATCTCGTTGACTGTGCTCTTGAGTGAGCACACT
ACAGTTTAATTTAAAATAGAATGAGAAAAAAACCGATGTGTTGATTGTCACACCTCCAGTTTGT
TGATTTCAGCTTAAGGCATTGTACCTACAAAAACAAAATATATTTTCCCAACTTTATTTCCGTG
TGCAGTTTTGACCCTACCCATATTTGTTTTTGCAGTCAAAGAATGGGGTATTCTGGATGTCTTG
GCAAGATTTTCAGATCCACTTTCGGTCAATATATGTCTGTCGTGTTTATCCACCCGAGATGCGT
TACTCTGTCCATGGCCAATGGCGTGGTTATAGTGCAGGTGGTTGCCAAGATTATGACTCATGGC
ATCAAAATCCTCAGTACCGGCTTAGAGTAACAGGACGGGATGCACTGTATCCTGTACATGTATT
TATTACCCTTACGCAGGTATATTCCATCCTGAATGTTAATGTACTTGGAGATTTCACTATGATG
TTGATATAAACAAATTCCATGCTTTGCCAGGGTGTTGGTTTTTCTAGAAAGACAAATGGTTTCC
GGAACTATCAATCTAGCCATGACTCTTCTATGTTTTACATTGGAATGAGGATACTCAAGACACG
GGGCTGCCGTGCTGCTTACAATATCTACATGCATGAATCAGTGGGTGGAACAGATTATGTTAAC
TCAAGGGAGATATCATGTGAATTAGTGTTGGAGCCTTATCCAAAAGGATACACAATTGTGCCCA
CAACCATCCATCCTGGAGAGGAAGCACCTTTTGTTTTATCAGTTTTTACAAAAGCACCAATCAA
GCTAGAAGCTGTTTAATGCAAGATTCATACTAGATGTGTTCGCTGCTGGTAGCTGTGCCTTGCT
GTTGCTGGCCCAGGCTCCTTTGGGGTTCAAGTGATGTAGATTCCAGCTGTGGGTTCAAGAGGAT
CAGATAATG
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs osa-miR2093-3p osa-miR2866
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021