Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d016101_circ_g.1 |
ID in PlantcircBase | zma_circ_008684 |
Alias | Zm05circ00087, ZmciR209 |
Organism | Zea mays |
Position | chr5: 144571170-144571571 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI2 |
Parent gene | Zm00001d016101 |
Parent gene annotation |
protein_coding |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf, endosperm |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d016101_T007:2 Zm00001d016101_T005:2 Zm00001d016101_T001:2 Zm00001d016101_T003:2 Zm00001d016101_T008:2 Zm00001d016101_T006:2 Zm00001d016101_T002:2 Zm00001d016101_T004:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.164269643 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to drought stress |
Other Information | |
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References | Han et al., 2020;Zhang et al., 2019 |