Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G20880_circ_g.1 |
ID in PlantcircBase | ath_circ_003678 |
Alias | 1:7262529-7263327 |
Organism | Arabidpsis thaliana |
Position | chr1: 7262529-7263327 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT1G20880 |
Parent gene annotation |
RNA-binding (RRM/RBD/RNP motifs) family protein |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 2 |
Tissues | seedling |
Exon boundary | No-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G20880.2:4 AT1G20880.3:2 AT1G20880.1:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.130927535 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |