Plant Circular RNA Database

Detail information of Os08g0160500_circ_g.13

			
						 General Information
					
						CircRNA Name
						Os08g0160500_circ_g.13
					
						ID in PlantcircBase
						osa_circ_035993
					
						Alias
						Os08circ03261/Os_ciR777
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr8: 3547239-3547983  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, KNIFE, PcircRNA_finder, SMALT, Segemehl, find_circ
					
						Parent gene
						
							Os08g0160500						
					
						Parent gene annotation
						
							MLG (mixed-linkage glucan) synthase, Biosynthesis of MLG (cell w
all polysaccharide) (Os08t0160500-01);Similar to Cellulose synth
ase-like CslF6. (Os08t0160500-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						4/31/58
					
						Tissues
						leaf and panicle/root/shoot, root, seed, pistil
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os08t0160500-02:1
Os08t0160500-01:1

General Information
CircRNA Name	Os08g0160500_circ_g.13
ID in PlantcircBase	osa_circ_035993
Alias	Os08circ03261/Os_ciR777
Organism	Oryza sativa
Position	chr8: 3547239-3547983 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, KNIFE, PcircRNA_finder, SMALT, Segemehl, find_circ
Parent gene	Os08g0160500
Parent gene annotation	MLG (mixed-linkage glucan) synthase, Biosynthesis of MLG (cell w all polysaccharide) (Os08t0160500-01);Similar to Cellulose synth ase-like CslF6. (Os08t0160500-02)
Parent gene strand	-
Alternative splicing	NA
Support reads	4/31/58
Tissues	leaf and panicle/root/shoot, root, seed, pistil
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os08t0160500-02:1 Os08t0160500-01:1

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							Yes							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							F: AGAGGTCCGACTCCTACAAC
 R: GAGAACCCGAACCAGAACTC
PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	Yes Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	F: AGAGGTCCGACTCCTACAAC R: GAGAACCCGAACCAGAACTC PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GATCGACGTCACCCACAGCCACATCGCGTCCGGGTTCTTGTGCTCGATACGCCATATCACGAAC
AGTGTGAACGCGATCAGCCTCACAAAGATCAGCACCcaggacgatgccggcgtggtcgcccttg
cggtggttctccgactgctcgatccaggtgccctcccactgcgacccgtcggccatccaggtgg
cgcggggc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 131
Transcript exons: 3547239-3547298,3547913-3547983
CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCCGG
GTTCTTGTGCTCGATACGCCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGC
ACC
Transcript length: 177
Transcript exons: 3547239-3547294,3547863-3547983
CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGCCCGAACC
AGAACTCGCCGGCGATCGACGTCACCCACAGCCACATCGCGTCCGGGTTCTTGTGCTCGATACG
CCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC
Transcript length: 187
Transcript exons: 3547239-3547336,3547895-3547983
CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC
CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGCCCACAGCCACATCGCGTCCGGGTTCTTGT
GCTCGATACGCCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC
Transcript length: 188
Transcript exons: 3547239-3547337,3547895-3547983
CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC
CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGGCCCACAGCCACATCGCGTCCGGGTTCTTG
TGCTCGATACGCCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC
Transcript length: 190
Transcript exons: 3547239-3547335,3547891-3547983
CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC
CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGTCACCCACAGCCACATCGCGTCCGGGTTCT
TGTGCTCGATACGCCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC
Transcript length: 196
Transcript exons: 3547239-3547294,3547844-3547983
CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGGGTCGAGC
AGCCACGAGAACCCGAACCAGAACTCGCCGGCGATCGACGTCACCCACAGCCACATCGCGTCCG
GGTTCTTGTGCTCGATACGCCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAG
CACC
Transcript length: 207
Transcript exons: 3547239-3547294,3547833-3547983
CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGCTTGGGGA
GCTGGTCGAGCAGCCACGAGAACCCGAACCAGAACTCGCCGGCGATCGACGTCACCCACAGCCA
CATCGCGTCCGGGTTCTTGTGCTCGATACGCCATATCACGAACAGTGTGAACGCGATCAGCCTC
ACAAAGATCAGCACC
Transcript length: 221
Transcript exons: 3547239-3547344,3547869-3547983
CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC
CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGGCTCGCCGCCAGAACTCGCCGGCGATCGAC
GTCACCCACAGCCACATCGCGTCCGGGTTCTTGTGCTCGATACGCCATATCACGAACAGTGTGA
ACGCGATCAGCCTCACAAAGATCAGCACC
Transcript length: 226
Transcript exons: 3547239-3547273,3547789-3547900,3547905-3547983
CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTCGGCGGAGGACGGCGAGGTCGGGGACGCG
GTTGATCGGGTTCAGCTTGGGGAGCTGGTCGAGCAGCCACGAGAACCCGAACCAGAACTCGCCG
GCGATCGACGTCACCCACACATCGCGTCCGGGTTCTTGTGCTCGATACGCCATATCACGAACAG
TGTGAACGCGATCAGCCTCACAAAGATCAGCACC
Transcript length: 241
Transcript exons: 3547239-3547403,3547908-3547983
CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC
CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGGCTCGCCGTCCTTGACGCCGGCGGCGGCGT
TGTAGGAGTCGGACCTCTGCTTGATGTCGTGCTCGAGCGCGTCCGGGTTCTTGTGCTCGATACG
CCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC
Transcript length: 249
Transcript exons: 3547239-3547319,3547799-3547917,3547935-3547983
CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC
CACTGCGACCCGTCGGCCGGCGAGGTCGGGGACGCGGTTGATCGGGTTCAGCTTGGGGAGCTGG
TCGAGCAGCCACGAGAACCCGAACCAGAACTCGCCGGCGATCGACGTCACCCACAGCCACATCG
CGTCCGGGCCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC
Transcript length: 330
Transcript exons: 3547239-3547395,3547799-3547899,3547912-3547983
CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC
CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGGCTCGCCGTCCTTGACGCCGGCGGCGGCGT
TGTAGGAGTCGGACCTCTGCTTGATGTCGCGGCGAGGTCGGGGACGCGGTTGATCGGGTTCAGC
TTGGGGAGCTGGTCGAGCAGCCACGAGAACCCGAACCAGAACTCGCCGGCGATCGACGTCACCC
ACTCCGGGTTCTTGTGCTCGATACGCCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAA
GATCAGCACC
Transcript length: 346
Transcript exons: 3547239-3547323,3547330-3547430,3547824-3547983
CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC
CACTGCGACCCGTCGGCCATCGCGCGGGGCTCGCCGTCCTTGACGCCGGCGGCGGCGTTGTAGG
AGTCGGACCTCTGCTTGATGTCGTGCTCGAGGCCGTTGATCCTGGCCTTGAAGTCGTCCGGGTT
CAGCTTGGGGAGCTGGTCGAGCAGCCACGAGAACCCGAACCAGAACTCGCCGGCGATCGACGTC
ACCCACAGCCACATCGCGTCCGGGTTCTTGTGCTCGATACGCCATATCACGAACAGTGTGAACG
CGATCAGCCTCACAAAGATCAGCACC
Transcript length: 745
Transcript exons: 3547239-3547983
CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC
CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGGCTCGCCGTCCTTGACGCCGGCGGCGGCGT
TGTAGGAGTCGGACCTCTGCTTGATGTCGTGCTCGAGGCCGTTGATCCTGGCCTTGAAGTCGTC
GTACTCCTTGCGGACGCGGCGGCGGTCGTTGACGAACTCCTCCTGCGCCCTCCCCATGTAGGGG
TGGGACTTGAGCTCGAAGTAGCTCTCAGGCCCGCGCGGCTCGATGGCGTGCTTCCGGCAGAAGG
GCACCCACAGCGTCGCGAACTTGGCCGCCTCCGCCATGGCCTCGTAGGTGAGGAGCATCCCAGA
GTCGTCGGAGAGGTAGCAGGTGTTGCGGTCGACGGGGTAGTCGGCGGCGAGGATGGAGAGGATG
GAGTTCGCCGTCGACAGGATGGGCTCCTTGATCGGGTCGGCGGTGGTGACGAAGATGTCCAGCC
CCGGGAGGGAGGAGGTCCCGTCGGCGTGGTCGAAGCGGCGGCGGAGGACGGCGAGGTCGGGGAC
GCGGTTGATCGGGTTCAGCTTGGGGAGCTGGTCGAGCAGCCACGAGAACCCGAACCAGAACTCG
CCGGCGATCGACGTCACCCACAGCCACATCGCGTCCGGGTTCTTGTGCTCGATACGCCATATCA
CGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC
						
					

						Genomic sequence
						
							CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC
CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGGCTCGCCGTCCTTGACGCCGGCGGCGGCGT
TGTAGGAGTCGGACCTCTGCTTGATGTCGTGCTCGAGGCCGTTGATCCTGGCCTTGAAGTCGTC
GTACTCCTTGCGGACGCGGCGGCGGTCGTTGACGAACTCCTCCTGCGCCCTCCCCATGTAGGGG
TGGGACTTGAGCTCGAAGTAGCTCTCAGGCCCGCGCGGCTCGATGGCGTGCTTCCGGCAGAAGG
GCACCCACAGCGTCGCGAACTTGGCCGCCTCCGCCATGGCCTCGTAGGTGAGGAGCATCCCAGA
GTCGTCGGAGAGGTAGCAGGTGTTGCGGTCGACGGGGTAGTCGGCGGCGAGGATGGAGAGGATG
GAGTTCGCCGTCGACAGGATGGGCTCCTTGATCGGGTCGGCGGTGGTGACGAAGATGTCCAGCC
CCGGGAGGGAGGAGGTCCCGTCGGCGTGGTCGAAGCGGCGGCGGAGGACGGCGAGGTCGGGGAC
GCGGTTGATCGGGTTCAGCTTGGGGAGCTGGTCGAGCAGCCACGAGAACCCGAACCAGAACTCG
CCGGCGATCGACGTCACCCACAGCCACATCGCGTCCGGGTTCTTGTGCTCGATACGCCATATCA
CGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC
						
					

			
		

Sequences
Splice junction sequence	GATCGACGTCACCCACAGCCACATCGCGTCCGGGTTCTTGTGCTCGATACGCCATATCACGAAC AGTGTGAACGCGATCAGCCTCACAAAGATCAGCACCcaggacgatgccggcgtggtcgcccttg cggtggttctccgactgctcgatccaggtgccctcccactgcgacccgtcggccatccaggtgg cgcggggc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 131 Transcript exons: 3547239-3547298,3547913-3547983 CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCCGG GTTCTTGTGCTCGATACGCCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGC ACC Transcript length: 177 Transcript exons: 3547239-3547294,3547863-3547983 CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGCCCGAACC AGAACTCGCCGGCGATCGACGTCACCCACAGCCACATCGCGTCCGGGTTCTTGTGCTCGATACG CCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC Transcript length: 187 Transcript exons: 3547239-3547336,3547895-3547983 CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGCCCACAGCCACATCGCGTCCGGGTTCTTGT GCTCGATACGCCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC Transcript length: 188 Transcript exons: 3547239-3547337,3547895-3547983 CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGGCCCACAGCCACATCGCGTCCGGGTTCTTG TGCTCGATACGCCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC Transcript length: 190 Transcript exons: 3547239-3547335,3547891-3547983 CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGTCACCCACAGCCACATCGCGTCCGGGTTCT TGTGCTCGATACGCCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC Transcript length: 196 Transcript exons: 3547239-3547294,3547844-3547983 CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGGGTCGAGC AGCCACGAGAACCCGAACCAGAACTCGCCGGCGATCGACGTCACCCACAGCCACATCGCGTCCG GGTTCTTGTGCTCGATACGCCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAG CACC Transcript length: 207 Transcript exons: 3547239-3547294,3547833-3547983 CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGCTTGGGGA GCTGGTCGAGCAGCCACGAGAACCCGAACCAGAACTCGCCGGCGATCGACGTCACCCACAGCCA CATCGCGTCCGGGTTCTTGTGCTCGATACGCCATATCACGAACAGTGTGAACGCGATCAGCCTC ACAAAGATCAGCACC Transcript length: 221 Transcript exons: 3547239-3547344,3547869-3547983 CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGGCTCGCCGCCAGAACTCGCCGGCGATCGAC GTCACCCACAGCCACATCGCGTCCGGGTTCTTGTGCTCGATACGCCATATCACGAACAGTGTGA ACGCGATCAGCCTCACAAAGATCAGCACC Transcript length: 226 Transcript exons: 3547239-3547273,3547789-3547900,3547905-3547983 CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTCGGCGGAGGACGGCGAGGTCGGGGACGCG GTTGATCGGGTTCAGCTTGGGGAGCTGGTCGAGCAGCCACGAGAACCCGAACCAGAACTCGCCG GCGATCGACGTCACCCACACATCGCGTCCGGGTTCTTGTGCTCGATACGCCATATCACGAACAG TGTGAACGCGATCAGCCTCACAAAGATCAGCACC Transcript length: 241 Transcript exons: 3547239-3547403,3547908-3547983 CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGGCTCGCCGTCCTTGACGCCGGCGGCGGCGT TGTAGGAGTCGGACCTCTGCTTGATGTCGTGCTCGAGCGCGTCCGGGTTCTTGTGCTCGATACG CCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC Transcript length: 249 Transcript exons: 3547239-3547319,3547799-3547917,3547935-3547983 CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC CACTGCGACCCGTCGGCCGGCGAGGTCGGGGACGCGGTTGATCGGGTTCAGCTTGGGGAGCTGG TCGAGCAGCCACGAGAACCCGAACCAGAACTCGCCGGCGATCGACGTCACCCACAGCCACATCG CGTCCGGGCCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC Transcript length: 330 Transcript exons: 3547239-3547395,3547799-3547899,3547912-3547983 CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGGCTCGCCGTCCTTGACGCCGGCGGCGGCGT TGTAGGAGTCGGACCTCTGCTTGATGTCGCGGCGAGGTCGGGGACGCGGTTGATCGGGTTCAGC TTGGGGAGCTGGTCGAGCAGCCACGAGAACCCGAACCAGAACTCGCCGGCGATCGACGTCACCC ACTCCGGGTTCTTGTGCTCGATACGCCATATCACGAACAGTGTGAACGCGATCAGCCTCACAAA GATCAGCACC Transcript length: 346 Transcript exons: 3547239-3547323,3547330-3547430,3547824-3547983 CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC CACTGCGACCCGTCGGCCATCGCGCGGGGCTCGCCGTCCTTGACGCCGGCGGCGGCGTTGTAGG AGTCGGACCTCTGCTTGATGTCGTGCTCGAGGCCGTTGATCCTGGCCTTGAAGTCGTCCGGGTT CAGCTTGGGGAGCTGGTCGAGCAGCCACGAGAACCCGAACCAGAACTCGCCGGCGATCGACGTC ACCCACAGCCACATCGCGTCCGGGTTCTTGTGCTCGATACGCCATATCACGAACAGTGTGAACG CGATCAGCCTCACAAAGATCAGCACC Transcript length: 745 Transcript exons: 3547239-3547983 CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGGCTCGCCGTCCTTGACGCCGGCGGCGGCGT TGTAGGAGTCGGACCTCTGCTTGATGTCGTGCTCGAGGCCGTTGATCCTGGCCTTGAAGTCGTC GTACTCCTTGCGGACGCGGCGGCGGTCGTTGACGAACTCCTCCTGCGCCCTCCCCATGTAGGGG TGGGACTTGAGCTCGAAGTAGCTCTCAGGCCCGCGCGGCTCGATGGCGTGCTTCCGGCAGAAGG GCACCCACAGCGTCGCGAACTTGGCCGCCTCCGCCATGGCCTCGTAGGTGAGGAGCATCCCAGA GTCGTCGGAGAGGTAGCAGGTGTTGCGGTCGACGGGGTAGTCGGCGGCGAGGATGGAGAGGATG GAGTTCGCCGTCGACAGGATGGGCTCCTTGATCGGGTCGGCGGTGGTGACGAAGATGTCCAGCC CCGGGAGGGAGGAGGTCCCGTCGGCGTGGTCGAAGCGGCGGCGGAGGACGGCGAGGTCGGGGAC GCGGTTGATCGGGTTCAGCTTGGGGAGCTGGTCGAGCAGCCACGAGAACCCGAACCAGAACTCG CCGGCGATCGACGTCACCCACAGCCACATCGCGTCCGGGTTCTTGTGCTCGATACGCCATATCA CGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC
Genomic sequence	CAGGACGATGCCGGCGTGGTCGCCCTTGCGGTGGTTCTCCGACTGCTCGATCCAGGTGCCCTCC CACTGCGACCCGTCGGCCATCCAGGTGGCGCGGGGCTCGCCGTCCTTGACGCCGGCGGCGGCGT TGTAGGAGTCGGACCTCTGCTTGATGTCGTGCTCGAGGCCGTTGATCCTGGCCTTGAAGTCGTC GTACTCCTTGCGGACGCGGCGGCGGTCGTTGACGAACTCCTCCTGCGCCCTCCCCATGTAGGGG TGGGACTTGAGCTCGAAGTAGCTCTCAGGCCCGCGCGGCTCGATGGCGTGCTTCCGGCAGAAGG GCACCCACAGCGTCGCGAACTTGGCCGCCTCCGCCATGGCCTCGTAGGTGAGGAGCATCCCAGA GTCGTCGGAGAGGTAGCAGGTGTTGCGGTCGACGGGGTAGTCGGCGGCGAGGATGGAGAGGATG GAGTTCGCCGTCGACAGGATGGGCTCCTTGATCGGGTCGGCGGTGGTGACGAAGATGTCCAGCC CCGGGAGGGAGGAGGTCCCGTCGGCGTGGTCGAAGCGGCGGCGGAGGACGGCGAGGTCGGGGAC GCGGTTGATCGGGTTCAGCTTGGGGAGCTGGTCGAGCAGCCACGAGAACCCGAACCAGAACTCG CCGGCGATCGACGTCACCCACAGCCACATCGCGTCCGGGTTCTTGTGCTCGATACGCCATATCA CGAACAGTGTGAACGCGATCAGCCTCACAAAGATCAGCACC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_018228 						
					
						PMCS
						0.595483333

Conservation Information
Conserved circRNAs	osi_circ_018228
PMCS	0.595483333

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							3547676-3547348(+)
3547909-3547521(-)
						
						Potential amino acid sequence
						
							MERMEFAVDRMGSLIGSAVVTKMSSPGREEVPSAWSKRRRRTARSGTRLIGFSLGSWSSSHENP
NQNSPAIDVTHSHIASGFLCSIRHITNSVNAISLTKISTQDDAGVVALAVVLRLLDPGALPLRP
VGHPGGAGLAVLDAGGGVVGVGPLLDVVLEAVDPGLEVVVLLADAAAVVDELLLRPPHVGVGLE
LEVALRPARLDGVLPAEGHPQRRELGRLRHGLVGEEHPRVVGEVAGVAVDGVVGGEDGEDGVRR
RQDGLLDRVGGGDEDVQPREGGGPVGVVEAAAEDGEVGDAVDRVQLGELVEQPREPEPELAGDR
RHPQPHRVRVLVLDTPYHEQCERDQPHKDQHPGRCRRGRPCGGSPTARSRCPPTATRRPSRWRG
ARRP*(+)
MWLWVTSIAGEFWFGFSWLLDQLPKLNPINRVPDLAVLRRRFDHADGTSSLPGLDIFVTTADPI
KEPILSTANSILSILAADYPVDRNTCYLSDDSGMLLTYEAMAEAAKFATLWVPFCRKHAIEPRG
PESYFELKSHPYMGRAQEEFVNDRRRVRKEYDDFKARINGLEHDIKQRSDSYNAAAGVKDGEPR
ATWMADGSQWEGTWIEQSENHRKGDHAGIVLGADLCEADRVHTVRDMAYRAQEPGRDVAVGDVD
RRRVLVRVLVAARPAPQAEPDQPRPRPRRPPPPLRPRRRDLLPPGAGHLRHHRRPDQGAHPVDG
ELHPLHPRRRLPRRPQHLLPLRRLWDAPHLRGHGGGGQVRDAVGALLPEARHRAARA*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	3547676-3547348(+) 3547909-3547521(-)
Potential amino acid sequence	MERMEFAVDRMGSLIGSAVVTKMSSPGREEVPSAWSKRRRRTARSGTRLIGFSLGSWSSSHENP NQNSPAIDVTHSHIASGFLCSIRHITNSVNAISLTKISTQDDAGVVALAVVLRLLDPGALPLRP VGHPGGAGLAVLDAGGGVVGVGPLLDVVLEAVDPGLEVVVLLADAAAVVDELLLRPPHVGVGLE LEVALRPARLDGVLPAEGHPQRRELGRLRHGLVGEEHPRVVGEVAGVAVDGVVGGEDGEDGVRR RQDGLLDRVGGGDEDVQPREGGGPVGVVEAAAEDGEVGDAVDRVQLGELVEQPREPEPELAGDR RHPQPHRVRVLVLDTPYHEQCERDQPHKDQHPGRCRRGRPCGGSPTARSRCPPTATRRPSRWRG ARRP(+) MWLWVTSIAGEFWFGFSWLLDQLPKLNPINRVPDLAVLRRRFDHADGTSSLPGLDIFVTTADPI KEPILSTANSILSILAADYPVDRNTCYLSDDSGMLLTYEAMAEAAKFATLWVPFCRKHAIEPRG PESYFELKSHPYMGRAQEEFVNDRRRVRKEYDDFKARINGLEHDIKQRSDSYNAAAGVKDGEPR ATWMADGSQWEGTWIEQSENHRKGDHAGIVLGADLCEADRVHTVRDMAYRAQEPGRDVAVGDVD RRRVLVRVLVAARPAPQAEPDQPRPRPRRPPPPLRPRRRDLLPPGAGHLRHHRRPDQGAHPVDG ELHPLHPRRRLPRRPQHLLPLRRLWDAPHLRGHGGGGQVRDAVGALLPEARHRAARA(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os08g0160500_circ_g.13

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