Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA030066_circ_g.3 |
ID in PlantcircBase | osi_circ_018879 |
Alias | Chr09:7151659_7155521(MH63RS2), Chr09:6166843_6170712(ZS97RS2), Chr09:7151659_7155521(MH63RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr9: 5905293-5907808 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ie-circRNA |
Identification method | CIRI2, CIRI2, CIRI2 |
Parent gene | BGIOSGA030066 |
Parent gene annotation | NA |
Parent gene strand | - |
Alternative splicing | BGIOSGA030066_circ_g.1 BGIOSGA030066_circ_g.2 BGIOSGA030066_circ_g.4 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | No-No |
Splicing signals | NN-TA |
Number of exons covered | BGIOSGA030066-TA:9 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | osa-miR5498 |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |