Plant Circular RNA Database

Detail information of Os03g0311300_circ_g.9

			
						 General Information
					
						CircRNA Name
						Os03g0311300_circ_g.9
					
						ID in PlantcircBase
						osa_circ_019496
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 11111852-11116284  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os03g0311300						
					
						Parent gene annotation
						
							Similar to HAD-superfamily hydrolase, subfamily IA, variant 3 co
ntaining protein, expressed. (Os03t0311300-01);Similar to HAD-su
perfamily hydrolase, subfamily IA, variant 3 containing protein,
 expressed. (Os03t0311300-02);NHL repeat domain containing prote
in. (Os03t0311300-03)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os03g0311300_circ_g.4 Os03g0311300_circ_g.5 Os03g0311300_circ_g.6 Os03g0311300_circ_g.7 Os03g0311300_circ_g.8 Os03g0311300_circ_g.10 Os03g0311300_circ_g.11 Os03g0311300_circ_g.12 Os03g0311300_circ_g.13 Os03g0311300_circ_g.14 Os03g0311300_circ_g.15 Os03g0311300_circ_g.16 Os03g0311300_circ_g.17 Os03g0311300_circ_g.18 Os03g0311300_circ_g.19 Os03g0311300_circ_g.20 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0311300-02:5
Os03t0311300-03:5

General Information
CircRNA Name	Os03g0311300_circ_g.9
ID in PlantcircBase	osa_circ_019496
Alias	NA
Organism	Oryza sativa
Position	chr3: 11111852-11116284 JBrowse»
Reference genome	IRGSP-1.0.38
Type	u-circRNA
Identification method	CIRCexplorer
Parent gene	Os03g0311300
Parent gene annotation	Similar to HAD-superfamily hydrolase, subfamily IA, variant 3 co ntaining protein, expressed. (Os03t0311300-01);Similar to HAD-su perfamily hydrolase, subfamily IA, variant 3 containing protein, expressed. (Os03t0311300-02);NHL repeat domain containing prote in. (Os03t0311300-03)
Parent gene strand	+
Alternative splicing	Os03g0311300_circ_g.4 Os03g0311300_circ_g.5 Os03g0311300_circ_g.6 Os03g0311300_circ_g.7 Os03g0311300_circ_g.8 Os03g0311300_circ_g.10 Os03g0311300_circ_g.11 Os03g0311300_circ_g.12 Os03g0311300_circ_g.13 Os03g0311300_circ_g.14 Os03g0311300_circ_g.15 Os03g0311300_circ_g.16 Os03g0311300_circ_g.17 Os03g0311300_circ_g.18 Os03g0311300_circ_g.19 Os03g0311300_circ_g.20
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0311300-02:5 Os03t0311300-03:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGTTACCAACCTGGAAGGGGAATTTATATGTCAAATTGGAAGTTCTGAAGAAGGACTACTTGAT
GGCACATTTGATACTGCTTCATTTAATCGCCCTCAAgatttaaaaggaagagtggtcctgttgg
atttttggacctattgctgcatcaattgcatgcatgtcttgcccgacctggaatttatagagaa
gaagtaca

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GATTTAAAAGGAAGAGTGGTCCTGTTGGATTTTTGGACCTATTGCTGCATCAATTGCATGCATG
TCTTGCCCGACCTGGAATTTATAGAGAAGAAGTACAAGGATAAACCTGTGAGCTTCTGTCTCCT
CGCATGCTGGACTGTATGTTTAGTTTTCTTTCAAGAGCTTTAGGTTGGAATCAATAAATGATTT
ATAACTTTGCTACTTAACATTTGTTCTGATATATTATAACTGCAGTATTTCTGCGCCGTAAATT
TTGACGATGCTAATCTTAATTTTATTTCTAATGATGTTTTTTTTTTCATGTTCCTTTTCTCCTA
ACTACTCTCTACTGATCATATGGTGATTCGTTAGTCCTGAAACTGAGTTTTCCTCAAAATATTG
TACTGTAGATCCTCTGAACTGAGCTGTAAAAACTTGTAATTTATTATAATTCACCATCACAAAA
AAATCAACTTGTGAAGTTGGTAGTACTAGGATTGGGCTGCTAATGCACTAGTGTGTTTTGTGTG
GTGTTCCTTTGGGTGTGTGGTGTTCTGTTGTATCCTTGGTGGACGGGTGTCGGAGTCTTTCTCT
AACACCGTTCATCTTTTCTTCTCTATCTTAATGAAATGATACGCAGATCTCCTGCGTGTTCTAA
AAAAAAAAAGTTGGTAGTATAGTTCCGTCCTTATAAGCTCACATGTTTACACTCATCCAATATT
CTTAGTTCTTACATCTGTAAGTTATAAATCATGGATATTATGTTTAGGAATTAGATGGATCTGC
TCATGGCACCTGCAATTTGAATATAAGTATATAATACATGATCGAGCCATAATGTGAAATTTTG
CTGCAACACTGTCTCTCATTGATGAAACTGGTATGATTTGAAGATATCTTGATATTTACATAAT
GTTGCTTGTTCCTGTGCAGTTCACTGTTGTCGGTGTGCACTCTGCCAAATTTGATAATGAAAAA
GATCTTGAAGCCATCAGAAATGCTGTTCTGCGCTACAACATTACTCATCCGGTAATACAGCTGT
GATAACTTGTGAAATGTTGAAATGAGAAACATCATTCCTGTGCTCCTCCCTGGCATAGACTTTC
ATGTCTATTGCTTTTTTGTGGTGTTCTTAACTTTTTAAAGCTATGGTCTTTCTTAAGGTTGTAA
ATGATGGGGACATGTACTTGTGGAGAGAACTGGGGGTGAACTCTTGGCCTACATTTGTTGTGAT
TGGGCCCAACGGGAAGGTTTTAGCACAAATATCAGGTGAAGGTCACAGAAAGGTATTAGCACTA
GAACATTCTATTCAAAAGACAAGCATTAAGTCCTAACTTGTGTAGTACTATCTGTGTTTGCCAG
TTTGCATCATTTAATCCTGCAACAGATTCTACTAGATGCACCTTAAGAGCAAGGATTTAAATCT
CCGGCTAAGACATTTAGCTGCTAGGTTCTCCATCATCTATGATCAGCTATAGCTGGCTATAGCT
GCAGCTAAGCTATTTAGCGGTTTTTGCAAAAATTAGACATAAATAACTTGATAATCAGTTATAT
GGAAGAGAAAGCTATTTAACTTGGGGAAAGCAGAGAAGACTAGGGAGAGAGGAATTGCTTGATA
ATCAGTAGGATCAAATCCTCACCACTTCCTCAACCATCTTGCTAAATTACAGGAGGAACATGCC
CATGAATTCCTCCCCCATGAATTCCTGAACTTGAACCCAAAAAAAACAATTCAAGAACCTCCAT
ACTCCTCACCCTGAGGCCACTGCAACCAACCAAACCAAGAAGAAATAATTCATGAGCAGCCAAG
CCACCAACAAACCAAGAAGAAACAATTCATGAGCAGCCAAGCCACCAACAAACCAAGAAGAAAC
AATTCATGAGCAGCCAAGCCACCAACAAACCAAGAAGAAACAATTCATGAGCAGCCAAGCCACC
AACAAACCAAGAAGAAACAATTCATGAGCAGCCAAGCCACCAATCCATCTCTGAACCAAGAAAC
AACACAAGGTTGGCTCGAGCACAAGAAAAAGAATACTGACAGAACAAGCACCGCCGCCTGCCGC
CTGTCACAGTCATCGCTTGGGGCCGGGATTGGTGGATCTGTTGTCTTCGGGAGTCGCCGCCGCT
GCCGCCACCGTTGCCGCAGCAGGTCGCAGCCACCACCTTCGGGAGCAGCCGCCGCCACTGCAGG
TCATAGCCACCGCCTTCGGGATCAACCGCCGTCGCGGCTGCTGCTGCCTCCTTGAGCAGCCGCT
GCAAGCCTGCAAGCCGCCGTCGACAGGAGAGGACGAAGAGTGACTGAGTGGAAAATGGAGAGAG
TTAGGGTTTCGTTAGGTGATATGGGCCGTTCGCCAATTTCAGGATTTCAGCCCACCAACGAGTT
AGCTGCCGCTATTTGAGAGCCCATTTAGCGGCTATCTCCAGCTAAAGGCAGCTAATAGCGCCTT
AGAACGTGTAGCTGTAAATTAGATATATCTTAGTGGTTGCTTCTCCTAGCAGCTATCTCCGGCT
ATAGCGGCAGCTATAGCCGGAGATTTAAATCCTTGCTTAAGAGTTTAGGCATTGATTAAGAATT
TAGGAGTTAAGTTCCAAAACCATATCTATTACATAATTAAAATAATGCTAAAGGGAGCGACAAT
ATTTACTGAAAGGTTATAATTCATAAATTGATCAGGAGAGGAGGAAAAATCCAACAATATTTTG
GTAGGTCTAAACTATAACAGCAAAATAATCAGATAGAAGAATATCTGAGGGAAGCGTTTTGAAT
ACAACTCCATATAAGGTTGTAGTACTTATTAGAGTTATATGGCTGGCAAATCGAGTATGCCATC
ATGAGCCATATACCAAACAGTTACCTGGGGTTTGTAGCTAGTTTTATTTAAGAGTAACCAAGCA
AATCAACATTTGCTAATTTCTTATGCTCTGTGTTGTCCTAACTGCTATTGGCAACTGACCCATG
CTGATATACCACAAATATGATTATGTTGTACCTGCCCCAACCCTCAAATGAACATGATATACTA
GGTGACGTCTGTGCTAATTTTAGTGGCGACACTGGACTGTTTGACATAAATTGATTGTACTGCC
ATTCATTAAACCACACGAACTAAATGGTTTATTCATTATTGATGTTTAAACTACATTGCCTCCA
TGTCATGGCTGTGCTCAGGCTGAAACCTAGTGATGGTATTATCAAGAGAAGCGTTTCCTGCGAC
TCTTGTTACATTGCAAAGCATATATTTGTAGGGTGTTACCCATATAGTTCATAAATATGGTACA
TGTTTAGTAGTTGGTTGCTTTTATTTTGCATCAGGTTAATACCAACAGATGAGCACAAAACATG
AATTTGGTTCATGATGAGAACCTAGGTTCACATCACAATAACTACAAAGGCCATCCAGAAGGGG
ATTTTTTTTCTTGCTTTGCTTGATTAAAAATGAGGTATATGCATCTTAGGAGGCTGAGATGAGC
CCCCTGATAAAAGTTCAATCTGGTTCATACTGTACTATATTCTGTCAACTCTGAACATGGTCAG
ACTCCTAGCAACTCTCCTAGTGCACCACTGAACCTTTTCCAGATCAATGATGTTACCTTTGTTG
GAATCAGCCTCCTGTTGCCAGGTGTCTTGGCCATCATACATGATATTTAACACAAAATTTTTAT
TTGATTATTTTGATTGCTTTAAGCTGCAAACGATTACGAATTGTGTTGGCTAAGTAGAACCTAA
TAGTCCATGGTAATCTTGATCTTGCTTGTCAAGTTCTTTTAGCATCTGTTCTGGACTACCTAAC
TATTCTAAAATCTAAATCTCGTTATTACAAGATAACAGAAGTTGCTGCATATGCCTGCCTGCCT
GACCTCTATCCTGTGATATGAGGACAAATTTATCCTGTCTAACCTGTACAACGATTTCTGCAAA
CAAGCCATCCCCTGTTTTTTTTTTCCACTGGCATAGTTGTTCATACATTTTTCATGGTAGTTAT
GGTGTCAATGCCTAGTCAATCACACTTATTCATTATTTCCAGGACCTTGATGATGTGGTTGGTG
CAGCTCTTGAATTTTATGAAGAAAATAAATTATTACAAAACAGTTCTCTTCCCTTGGCATTGGA
GAAGGACAAGGATAGTCGTTTACTAGCTTCACCGCTTAAATTTCCTGGGAAACTTGCAATAGAT
GTACTGAACAATCGGTTGTTTATATCAGACAGTAATCATAATCGAATTGTGAGTATTCTTTGTT
TTGCACAACGATATAGCATTGCATTGACTAGGCTAATTTACTTCACATGTATGATCTATTTCTT
ATCTGATTTAGCTGTTTGTTCTATCCTCATTTCTGTAATTAAGGTAGTTACCAACCTGGAAGGG
GAATTTATATGTCAAATTGGAAGTTCTGAAGAAGGACTACTTGATGGCACATTTGATACTGCTT
CATTTAATCGCCCTCAA
						
					

			
		

Sequences
Splice junction sequence	AGTTACCAACCTGGAAGGGGAATTTATATGTCAAATTGGAAGTTCTGAAGAAGGACTACTTGAT GGCACATTTGATACTGCTTCATTTAATCGCCCTCAAgatttaaaaggaagagtggtcctgttgg atttttggacctattgctgcatcaattgcatgcatgtcttgcccgacctggaatttatagagaa gaagtaca
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GATTTAAAAGGAAGAGTGGTCCTGTTGGATTTTTGGACCTATTGCTGCATCAATTGCATGCATG TCTTGCCCGACCTGGAATTTATAGAGAAGAAGTACAAGGATAAACCTGTGAGCTTCTGTCTCCT CGCATGCTGGACTGTATGTTTAGTTTTCTTTCAAGAGCTTTAGGTTGGAATCAATAAATGATTT ATAACTTTGCTACTTAACATTTGTTCTGATATATTATAACTGCAGTATTTCTGCGCCGTAAATT TTGACGATGCTAATCTTAATTTTATTTCTAATGATGTTTTTTTTTTCATGTTCCTTTTCTCCTA ACTACTCTCTACTGATCATATGGTGATTCGTTAGTCCTGAAACTGAGTTTTCCTCAAAATATTG TACTGTAGATCCTCTGAACTGAGCTGTAAAAACTTGTAATTTATTATAATTCACCATCACAAAA AAATCAACTTGTGAAGTTGGTAGTACTAGGATTGGGCTGCTAATGCACTAGTGTGTTTTGTGTG GTGTTCCTTTGGGTGTGTGGTGTTCTGTTGTATCCTTGGTGGACGGGTGTCGGAGTCTTTCTCT AACACCGTTCATCTTTTCTTCTCTATCTTAATGAAATGATACGCAGATCTCCTGCGTGTTCTAA AAAAAAAAAGTTGGTAGTATAGTTCCGTCCTTATAAGCTCACATGTTTACACTCATCCAATATT CTTAGTTCTTACATCTGTAAGTTATAAATCATGGATATTATGTTTAGGAATTAGATGGATCTGC TCATGGCACCTGCAATTTGAATATAAGTATATAATACATGATCGAGCCATAATGTGAAATTTTG CTGCAACACTGTCTCTCATTGATGAAACTGGTATGATTTGAAGATATCTTGATATTTACATAAT GTTGCTTGTTCCTGTGCAGTTCACTGTTGTCGGTGTGCACTCTGCCAAATTTGATAATGAAAAA GATCTTGAAGCCATCAGAAATGCTGTTCTGCGCTACAACATTACTCATCCGGTAATACAGCTGT GATAACTTGTGAAATGTTGAAATGAGAAACATCATTCCTGTGCTCCTCCCTGGCATAGACTTTC ATGTCTATTGCTTTTTTGTGGTGTTCTTAACTTTTTAAAGCTATGGTCTTTCTTAAGGTTGTAA ATGATGGGGACATGTACTTGTGGAGAGAACTGGGGGTGAACTCTTGGCCTACATTTGTTGTGAT TGGGCCCAACGGGAAGGTTTTAGCACAAATATCAGGTGAAGGTCACAGAAAGGTATTAGCACTA GAACATTCTATTCAAAAGACAAGCATTAAGTCCTAACTTGTGTAGTACTATCTGTGTTTGCCAG TTTGCATCATTTAATCCTGCAACAGATTCTACTAGATGCACCTTAAGAGCAAGGATTTAAATCT CCGGCTAAGACATTTAGCTGCTAGGTTCTCCATCATCTATGATCAGCTATAGCTGGCTATAGCT GCAGCTAAGCTATTTAGCGGTTTTTGCAAAAATTAGACATAAATAACTTGATAATCAGTTATAT GGAAGAGAAAGCTATTTAACTTGGGGAAAGCAGAGAAGACTAGGGAGAGAGGAATTGCTTGATA ATCAGTAGGATCAAATCCTCACCACTTCCTCAACCATCTTGCTAAATTACAGGAGGAACATGCC CATGAATTCCTCCCCCATGAATTCCTGAACTTGAACCCAAAAAAAACAATTCAAGAACCTCCAT ACTCCTCACCCTGAGGCCACTGCAACCAACCAAACCAAGAAGAAATAATTCATGAGCAGCCAAG CCACCAACAAACCAAGAAGAAACAATTCATGAGCAGCCAAGCCACCAACAAACCAAGAAGAAAC AATTCATGAGCAGCCAAGCCACCAACAAACCAAGAAGAAACAATTCATGAGCAGCCAAGCCACC AACAAACCAAGAAGAAACAATTCATGAGCAGCCAAGCCACCAATCCATCTCTGAACCAAGAAAC AACACAAGGTTGGCTCGAGCACAAGAAAAAGAATACTGACAGAACAAGCACCGCCGCCTGCCGC CTGTCACAGTCATCGCTTGGGGCCGGGATTGGTGGATCTGTTGTCTTCGGGAGTCGCCGCCGCT GCCGCCACCGTTGCCGCAGCAGGTCGCAGCCACCACCTTCGGGAGCAGCCGCCGCCACTGCAGG TCATAGCCACCGCCTTCGGGATCAACCGCCGTCGCGGCTGCTGCTGCCTCCTTGAGCAGCCGCT GCAAGCCTGCAAGCCGCCGTCGACAGGAGAGGACGAAGAGTGACTGAGTGGAAAATGGAGAGAG TTAGGGTTTCGTTAGGTGATATGGGCCGTTCGCCAATTTCAGGATTTCAGCCCACCAACGAGTT AGCTGCCGCTATTTGAGAGCCCATTTAGCGGCTATCTCCAGCTAAAGGCAGCTAATAGCGCCTT AGAACGTGTAGCTGTAAATTAGATATATCTTAGTGGTTGCTTCTCCTAGCAGCTATCTCCGGCT ATAGCGGCAGCTATAGCCGGAGATTTAAATCCTTGCTTAAGAGTTTAGGCATTGATTAAGAATT TAGGAGTTAAGTTCCAAAACCATATCTATTACATAATTAAAATAATGCTAAAGGGAGCGACAAT ATTTACTGAAAGGTTATAATTCATAAATTGATCAGGAGAGGAGGAAAAATCCAACAATATTTTG GTAGGTCTAAACTATAACAGCAAAATAATCAGATAGAAGAATATCTGAGGGAAGCGTTTTGAAT ACAACTCCATATAAGGTTGTAGTACTTATTAGAGTTATATGGCTGGCAAATCGAGTATGCCATC ATGAGCCATATACCAAACAGTTACCTGGGGTTTGTAGCTAGTTTTATTTAAGAGTAACCAAGCA AATCAACATTTGCTAATTTCTTATGCTCTGTGTTGTCCTAACTGCTATTGGCAACTGACCCATG CTGATATACCACAAATATGATTATGTTGTACCTGCCCCAACCCTCAAATGAACATGATATACTA GGTGACGTCTGTGCTAATTTTAGTGGCGACACTGGACTGTTTGACATAAATTGATTGTACTGCC ATTCATTAAACCACACGAACTAAATGGTTTATTCATTATTGATGTTTAAACTACATTGCCTCCA TGTCATGGCTGTGCTCAGGCTGAAACCTAGTGATGGTATTATCAAGAGAAGCGTTTCCTGCGAC TCTTGTTACATTGCAAAGCATATATTTGTAGGGTGTTACCCATATAGTTCATAAATATGGTACA TGTTTAGTAGTTGGTTGCTTTTATTTTGCATCAGGTTAATACCAACAGATGAGCACAAAACATG AATTTGGTTCATGATGAGAACCTAGGTTCACATCACAATAACTACAAAGGCCATCCAGAAGGGG ATTTTTTTTCTTGCTTTGCTTGATTAAAAATGAGGTATATGCATCTTAGGAGGCTGAGATGAGC CCCCTGATAAAAGTTCAATCTGGTTCATACTGTACTATATTCTGTCAACTCTGAACATGGTCAG ACTCCTAGCAACTCTCCTAGTGCACCACTGAACCTTTTCCAGATCAATGATGTTACCTTTGTTG GAATCAGCCTCCTGTTGCCAGGTGTCTTGGCCATCATACATGATATTTAACACAAAATTTTTAT TTGATTATTTTGATTGCTTTAAGCTGCAAACGATTACGAATTGTGTTGGCTAAGTAGAACCTAA TAGTCCATGGTAATCTTGATCTTGCTTGTCAAGTTCTTTTAGCATCTGTTCTGGACTACCTAAC TATTCTAAAATCTAAATCTCGTTATTACAAGATAACAGAAGTTGCTGCATATGCCTGCCTGCCT GACCTCTATCCTGTGATATGAGGACAAATTTATCCTGTCTAACCTGTACAACGATTTCTGCAAA CAAGCCATCCCCTGTTTTTTTTTTCCACTGGCATAGTTGTTCATACATTTTTCATGGTAGTTAT GGTGTCAATGCCTAGTCAATCACACTTATTCATTATTTCCAGGACCTTGATGATGTGGTTGGTG CAGCTCTTGAATTTTATGAAGAAAATAAATTATTACAAAACAGTTCTCTTCCCTTGGCATTGGA GAAGGACAAGGATAGTCGTTTACTAGCTTCACCGCTTAAATTTCCTGGGAAACTTGCAATAGAT GTACTGAACAATCGGTTGTTTATATCAGACAGTAATCATAATCGAATTGTGAGTATTCTTTGTT TTGCACAACGATATAGCATTGCATTGACTAGGCTAATTTACTTCACATGTATGATCTATTTCTT ATCTGATTTAGCTGTTTGTTCTATCCTCATTTCTGTAATTAAGGTAGTTACCAACCTGGAAGGG GAATTTATATGTCAAATTGGAAGTTCTGAAGAAGGACTACTTGATGGCACATTTGATACTGCTT CATTTAATCGCCCTCAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.221357828

Conservation Information
Conserved circRNAs	NA
PMCS	0.221357828

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							11111910-11116281(+)
						
						Potential amino acid sequence
						
							MHVLPDLEFIEKKYKDKPFTVVGVHSAKFDNEKDLEAIRNAVLRYNITHPVVNDGDMYLWRELG
VNSWPTFVVIGPNGKVLAQISGEGHRKDLDDVVGAALEFYEENKLLQNSSLPLALEKDKDSRLL
ASPLKFPGKLAIDVLNNRLFISDSNHNRIVVTNLEGEFICQIGSSEEGLLDGTFDTASFNRPQD
LKGRVVLLDFWTYCCINCMHVLPDLEFIEKKYKDKPFTVVGVHSAKFDNEKDLEAIRNAVLRYN
ITHPVVNDGDMYLWRELGVNSWPTFVVIGPNGKVLAQISGEGHRKDLDDVVGAALEFYEENKLL
QNSSLPLALEKDKDSRLLASPLKFPGKLAIDVLNNRLFISDSNHNRIVVTNLEGEFICQIGSSE
EGLLDGTFDTASFNRPQDLKGRVVLLDFWTYCCINCMHVLPDLEFIEKKYKDKPFTVVGVHSAK
FDNEKDLEAIRNAVLRYNITHPVVNDGDMYLWRELGVNSWPTFVVIGPNGKVLAQISGEGHRKD
LDDVVGAALEFYEENKLLQNSSLPLALEKDKDSRLLASPLKFPGKLAIDVLNNRLFISDSNHNR
IVVTNLEGEFICQIGSSEEGLLDGTFDTASFNRPQDLKGRVVLLDFWTYCCINCMHVLPDLEFI
EKKYKDKPFTVVGVHSAKFDNEKDLEAIRNAVLRYNITHPVVNDGDMYLWRELGVNSWPTFVVI
GPNGKVLAQISGEGHRKDLDDVVGAALEFYEENKLLQNSSLPLALEKDKDSRLLASPLKFPGKL
AIDVLNNRLFISDSNHNRIVVTNLEGEFICQIGSSEEGLLDGTFDTASFNRPQ(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	11111910-11116281(+)
Potential amino acid sequence	MHVLPDLEFIEKKYKDKPFTVVGVHSAKFDNEKDLEAIRNAVLRYNITHPVVNDGDMYLWRELG VNSWPTFVVIGPNGKVLAQISGEGHRKDLDDVVGAALEFYEENKLLQNSSLPLALEKDKDSRLL ASPLKFPGKLAIDVLNNRLFISDSNHNRIVVTNLEGEFICQIGSSEEGLLDGTFDTASFNRPQD LKGRVVLLDFWTYCCINCMHVLPDLEFIEKKYKDKPFTVVGVHSAKFDNEKDLEAIRNAVLRYN ITHPVVNDGDMYLWRELGVNSWPTFVVIGPNGKVLAQISGEGHRKDLDDVVGAALEFYEENKLL QNSSLPLALEKDKDSRLLASPLKFPGKLAIDVLNNRLFISDSNHNRIVVTNLEGEFICQIGSSE EGLLDGTFDTASFNRPQDLKGRVVLLDFWTYCCINCMHVLPDLEFIEKKYKDKPFTVVGVHSAK FDNEKDLEAIRNAVLRYNITHPVVNDGDMYLWRELGVNSWPTFVVIGPNGKVLAQISGEGHRKD LDDVVGAALEFYEENKLLQNSSLPLALEKDKDSRLLASPLKFPGKLAIDVLNNRLFISDSNHNR IVVTNLEGEFICQIGSSEEGLLDGTFDTASFNRPQDLKGRVVLLDFWTYCCINCMHVLPDLEFI EKKYKDKPFTVVGVHSAKFDNEKDLEAIRNAVLRYNITHPVVNDGDMYLWRELGVNSWPTFVVI GPNGKVLAQISGEGHRKDLDDVVGAALEFYEENKLLQNSSLPLALEKDKDSRLLASPLKFPGKL AIDVLNNRLFISDSNHNRIVVTNLEGEFICQIGSSEEGLLDGTFDTASFNRPQ(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os03g0311300_circ_g.9

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