Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d013318_circ_g.1 |
ID in PlantcircBase | zma_circ_001884 |
Alias | circ869 |
Organism | Zea mays |
Position | chr5: 8524740-8524875 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d013318 |
Parent gene annotation |
E3 ubiquitin-protein ligase HOS1 |
Parent gene strand | + |
Alternative splicing | Zm00001d013318_circ_g.2 Zm00001d013318_circ_g.3 Zm00001d013318_circ_g.4 Zm00001d013318_circ_g.5 |
Support reads | 8 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d013318_T032:1 Zm00001d013318_T001:1 Zm00001d013318_T033:1 Zm00001d013318_T023:1 Zm00001d013318_T019:1 Zm00001d013318_T037:1 Zm00001d013318_T010:1 Zm00001d013318_T029:1 Zm00001d013318_T003:1 Zm00001d013318_T025:1 Zm00001d013318_T036:1 Zm00001d013318_T028:1 Zm00001d013318_T002:1 Zm00001d013318_T030:1 Zm00001d013318_T015:1 Zm00001d013318_T011:1 Zm00001d013318_T017:1 Zm00001d013318_T024:1 Zm00001d013318_T021:1 Zm00001d013318_T016:1 Zm00001d013318_T007:1 Zm00001d013318_T035:1 |
Conservation Information | |
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Conserved circRNAs | osa_circ_021748 |
PMCS | 0.719366483 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |