Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G70490_circ_g.1 |
ID in PlantcircBase | ath_circ_009463 |
Alias | 1:26564050-26565161 |
Organism | Arabidpsis thaliana |
Position | chr1: 26564050-26565161 JBrowse» |
Reference genome | TAIR10.38 |
Type | u-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT1G70490 |
Parent gene annotation |
ADP-ribosylation factor 2-B |
Parent gene strand | - |
Alternative splicing | AT1G70490_circ_g.2 AT1G70490_circ_g.3 AT1G70490_circ_g.4 AT1G70490_circ_g.5 AT1G70490_circ_g.6 AT1G70490_circ_g.7 |
Support reads | 3 |
Tissues | flower |
Exon boundary | No-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G70490.1:6 AT1G70490.5:6 AT1G70490.2:6 AT1G70490.6:6 AT1G70490.4:6 AT1G70490.3:6 AT1G70490.7:6 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.357892364 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |